Capsicum annuum (peppers): 107842757
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Entry
107842757 CDS
T04646
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cann01009
]
107842757
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107842757
Enzymes [BR:
cann01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107842757
Protein phosphatases and associated proteins [BR:
cann01009
]
HAD phosphatases
Fcp/Scp phosphatases
107842757
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107842757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DUF4998
HAD
Motif
Other DBs
NCBI-GeneID:
107842757
NCBI-ProteinID:
XP_016542225
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All DBs
Position
9:61791940..61801904
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AA seq
873 aa
AA seq
DB search
MSRLGVKSVVFHGETCLGELDTIPVKDQSFQFPNNEIRIHHISTNSERCHPLSVLQTIIA
PVRCKLEPNLNSVPVGSDQSPLINLHASCFYELKTAVVLLGEEEIHLVAMPSKQKKFPCF
WCYSVPLGLYSACLRMLNMRCLSIVFDLDETLIVANTMKSFEDRIEALRGWVARETDPIR
LSGMSAEMKRYMEDRALLKQYSESDSVADGGKVYKAQQEEVLQLSEGQERVVRPVIRLLE
RNVVLTRINPENRDTSVLVRLRPAWDELRTYLTAKGRKRFEVYVCTMAERDYALEIWRLL
DPGSHLINGKQLTDRVVCVKSGAKKSLLTVFQNGNCHPKLAMVIDDRLKVWEDKDQPRVH
VVPAFIPYYAPQAEMANAVPVLCVARNVACDVRGRFFKEFDEGLLRKICEIFYEDEVVNL
PSAPDVSNYLMSEDAGFVSSGNFAPIPEGMYGPEVAQRLHQQEGKVNMNAVPPFTSNNPD
MKSGSSQLTGGTAANVPAQSMRPVQSSEKPSLLGAPFRRDNSFSEADADGKRRYPILNPS
QDMRYRGSAEPPLLSRMPQKPPILPIPSQGGWLVEDDLNKGQMGSRSPGIFQESDASRYD
KQRGHQILSQGATSTVLPTYASTGKNGEANSRHDMHRQNSLIHQTEGRFSQHQSLFNNRE
SQLEAMRMNLPSLATGVLQEIARRCNSKVEFRPVVSTVEELQFSVEVFFTGERVGVGMGK
TRKDAQQQAAENALRNLADKYISYVTSHPRVADKDFDKISVENENGFLWDTVNNMDERSV
EDRLPQVNVSEKGYCHLSAKGHLVAEQSSQPSNWLLWGAFRIFPPYVTEKMDFLFRFTLI
GEVIRTFFYTRAILVSLFLPQEFVTIYFLAVHF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttaggggtgaaatcggtggtgtttcatggcgaaacgtgtttaggagagcta
gatactattccagtgaaggatcagagttttcaatttccgaataacgagatacggatccat
catatctctacaaacagtgagcggtgtcatcctctctctgttctgcaaacaattatagca
cctgttcgttgtaagcttgaaccgaacttgaattcggtgccagttggttctgatcagtct
ccgttgatcaatcttcacgcttcctgcttctatgaactcaagactgcagtagtcttgctg
ggggaagaagaaatacatttggtagcaatgccaagtaagcagaaaaagttcccctgtttt
tggtgctattcagtgcccttaggtctgtatagtgcttgtttacgaatgttgaatatgagg
tgtttatcaattgttttcgatctggacgagactttaattgttgcaaatacaatgaagtca
tttgaggatagaattgaggctttgcggggttgggttgcacgagagacggatccaattcgg
ttatctggaatgtctgctgagatgaagaggtatatggaggatcgtgcactgttgaaacag
tactcggagagtgattcagttgctgacggtggaaaagtatataaagcccaacaagaggag
gtgctacagttatctgaagggcaagagcgtgtagttcggccagtcataaggttgctggaa
aggaatgtggtccttacgcggattaatccagagaatcgggataccagcgtgctagttaga
ttacgtcctgcttgggatgagttgagaacttatttgacggcgaaaggtcggaaaaggttt
gaagtatatgtttgcaccatggcagagagagattatgcattggagatttggaggctactt
gaccctgggtcacacctcattaatggcaagcaattgacggaccgggttgtatgtgtcaaa
tcaggagccaagaagtctttactcactgtcttccaaaatggcaattgtcatccaaaattg
gcgatggttattgatgaccgattaaaagtgtgggaagataaagatcaacctcgtgttcat
gttgtccctgcttttattccatattatgctccacaagcagagatggccaatgcagttcca
gtcctgtgtgtggcgagaaatgttgcttgtgatgttagaggtcgtttcttcaaagagttt
gatgaaggtctactccgaaagatctgtgaaatcttctatgaagatgaggttgtaaattta
ccttctgcacctgatgttagcaactacttaatgtccgaggatgctggttttgtgtcatct
ggaaattttgctcctattcccgagggaatgtacgggcctgaagttgcacaaaggttgcat
caacaggagggaaaagttaatatgaatgctgttcctcctttcacgagtaacaatcctgat
atgaagtcaggaagctcccagcttacgggtggaactgctgcaaatgtacctgctcaatca
atgagaccagttcaatcttcagaaaaaccaagtttactgggagcgccattcagacgagat
aacagtttttctgaagctgatgctgatgggaagagaaggtaccccatattgaatcctagc
caggatatgaggtatcgtggttcagcagaacctcctttattatctagaatgcctcagaaa
ccacccatactgcccataccgtcacagggtggttggttggtggaagatgacctaaataaa
ggacagatgggtagtcgatcacctggaatttttcaagaatctgatgcatcaaggtatgat
aaacagagaggtcatcagattctcagtcaaggtgcaacaagcacggtgttaccaacatat
gcatctacggggaagaatggggaggcaaattccaggcatgatatgcacagacagaattct
cttattcatcagacagagggtaggttctctcaacatcagtctctatttaacaacagagaa
tctcaactagaagctatgagaatgaacttaccatctttagctactggggtgctgcaagaa
attgcacgacgatgcaactcaaaggttgagttcaggcctgtggtgagcactgttgaggaa
ttgcaattttcagttgaggtcttcttcactggtgagagagttggtgtcggaatgggtaag
actaggaaggatgctcaacaacaggcagctgagaatgcacttcgtaacttggctgataaa
tacatctcatacgttacatcgcaccctcgagtagcggataaagacttcgataagatttca
gtggaaaatgaaaatgggttcttgtgggacacagtcaataacatggatgaacggtcggtg
gaggatagattacctcaagtaaatgtttcggagaagggctattgccacctatctgcaaag
ggacatttggtagcggaacagtcttcacaaccatcaaattggctactttggggtgccttc
aggattttcccgccatatgttacggagaaaatggattttctcttccgctttactctcatt
ggagaagtgattcgtacatttttttatacaagggctattttggtgtccttgtttctgccg
caagagtttgtaactatctattttcttgcagttcatttttaa
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