Capsicum annuum (peppers): 107847931
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Entry
107847931 CDS
T04646
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00730
Thiamine metabolism
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
107847931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107847931
Enzymes [BR:
cann01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
107847931
Ribosome biogenesis [BR:
cann03009
]
Prokaryotic type
GTPases
107847931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_29
nSTAND1
AAA_23
IstB_IS21
AAA_16
AAA_21
AAA_22
SMC_N
B2
Dynamin_N
IIGP
Adeno_IVa2
AAA_28
Septin
Motif
Other DBs
NCBI-GeneID:
107847931
NCBI-ProteinID:
XP_016548021
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All DBs
Position
11:85876948..85885762
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AA seq
488 aa
AA seq
DB search
MKIASFSLLRLPFTASTTGHRFFSAVIVAAGHHENPNNVSRKLQQPNKNLLKARETINKH
FSTLAPILSQEDKPHLSYDQAVGTVASSQANFMRVIVQHIPPESSVDPSGSFSKGSGEIG
VELLCVVKAVLKKIKRRVLVGDKVLVGSIDWVDKRGAIENVFQRKTEILDPPVANVDHLL
VFFSMDQPKIEPFSLTRFLVEAESTGIPLTLALNKSELVSQEEIKAWKCRLRSWAYEPIF
CSIDSKRGLDTLQFIMREQTSVIVGPSGVGKSSLINALRGNKHILHAVEERNWFDPQILG
SKWYEEQRVGEVSVRSGRGKHTTRHVSLLPLPDGGYLADTPGFNQPSLIEVTKNSLAHHF
PEIRKMLKDSEPANCAFNNCLHLGEPGCLIKGDWERYPYYLQLLDEIKIREEFQLRTIGT
KREGDVRCKIGDKGVVQAEPRLEAKKYRRQSRKRVNQSLLDELDELDDEDDTLEDDNPIL
RAMREENQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcttcgttttcacttcttaggcttcctttcaccgcctccactactggccac
cgcttcttctccgctgtcatcgtcgctgccggccatcacgaaaaccctaacaatgtgtca
aggaagctccaacaaccgaacaaaaatctcctcaaagctcgtgaaactatcaataaacat
ttctctactctagcaccgattctttctcaggaagacaaacctcacctctcttacgaccaa
gccgtaggtaccgtggcgtcttcacaagcaaacttcatgcgcgttatcgtccaacatatt
cctccagaaagttctgtggatccttctggaagcttcagcaaaggttcgggggaaattgga
gtggagttgttgtgtgtggtgaaggctgtgttgaagaagattaagaggagagttttggtt
ggggataaggttttggtaggttcaattgattgggtggataaacgtggagctattgagaat
gtgtttcaaaggaagacggagattttggatcctccagtagctaatgtggatcatttgcta
gtgtttttctctatggatcagccaaagattgagccattctcgctcactaggttcctcgta
gaagctgaatcaaccggaattcctctcactcttgcgttaaataaatcagaacttgtttct
caagaggaaataaaagcatggaaatgtaggcttcgaagttgggcctatgaaccaatcttt
tgcagcattgattccaagcgtggacttgatacactccagtttattatgagagaacaaaca
tccgtcattgttggtccaagtggagtggggaaatccagcctgatcaatgctttgagaggc
aataagcacattcttcatgcagtcgaagagcgaaactggtttgatcctcagattctaggg
agcaagtggtatgaagagcaacgtgtcggggaagtgtcagtaagaagcggcagaggaaag
catacaacaaggcacgtgtctttgcttccattgcctgatggggggtatcttgctgatact
ccaggatttaaccagcctagtttgattgaagtgacaaagaattctcttgcacatcatttt
ccggagatccgcaagatgcttaaagatagtgaacctgcaaactgtgcattcaataattgc
ttgcatcttggtgaaccggggtgccttataaaaggtgattgggaaagatatccatattat
cttcagttgcttgacgaaattaagattagggaggaatttcagttgaggaccattggaact
aaacgagaaggtgatgttaggtgcaaaataggagacaagggagttgtgcaagcagaaccg
cggctggaggccaagaaatacaggagacagtctcgtaaaagagtgaaccagtcattacta
gatgaattggatgaactcgatgatgaagacgatacactggaggatgacaatcctattcta
agagcaatgagggaagaaaatcaatag
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