Capsicum annuum (peppers): 107850169
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Entry
107850169 CDS
T04646
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107850169
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cann01009
]
107850169
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107850169
Protein phosphatases and associated proteins [BR:
cann01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107850169
Spliceosome [BR:
cann03041
]
Common components
Common spliceosomal components
SR proteins
107850169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
107850169
NCBI-ProteinID:
XP_016550070
LinkDB
All DBs
Position
12:complement(232970259..232974829)
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AA seq
269 aa
AA seq
DB search
MRGRSYSPSPPRGYGRRGRSPIPRGGHYGGRSRDEPTTLLVRNLRHDCRPEDLKKPFGQI
GPVKDIYLPRDYYTREPRGFGFIQYLDAADAEEAKYQMDGQVFQGRPLTVVFAEENRKKP
QEMRARERGSGRGGRNYDRRGTPTRYHNPPRYSRSPPPRGRNYYSPPKRRQYSRSVSPEE
KRYSRERSYSQSPPREESPPFNGSRSRSQSPVREHAPPYGSRSHSRSPVRARSPVRGHSR
RRSPSQSHSRSPDAVRYSRNPDSNVPPRR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaagaagttacagcccatcacccccaagaggttatggaaggagaggaaggagc
ccaatccccagggggggtcactatggtggtcgtagcagagatgaaccaactactctatta
gtgcgcaatcttcgccatgactgtcggccagaagaccttaaaaagccatttgggcaaatt
ggtcctgtcaaggacatttacttgccgagggactattacactcgcgaaccaagggggttt
ggatttatccaatatctggatgctgctgatgcagaagaagctaagtatcagatggatggt
caggtttttcaaggtcggccactgaccgtagtttttgctgaggagaacaggaaaaagcct
caagaaatgagagctagggagcgtggaagtggtaggggtggccgcaactatgatcggaga
ggtacccccactaggtatcataaccctcctcggtattcacgatctccgcctccccgtggc
cgtaattactactctccacctaagagaaggcaatattcaaggtctgtttcgcctgaagag
aaaagatacagccgcgagagatcatattcacaatcccctccaagggaggagtctccacca
ttcaatgggtcaagaagccgcagtcagagtccagtcagggagcatgctccgccttatggt
tccaggagtcacagccggagtccagttagagcacgttctccagttaggggtcacagcagg
aggcggagccctagtcaaagccatagcaggagccctgatgccgttcgttattccaggaat
cccgacagcaacgtgcccccaaggcgctga
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