Capsicum annuum (peppers): 107852884
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Entry
107852884 CDS
T04646
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107852884
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107852884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
107852884
NCBI-ProteinID:
XP_047257823
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Position
1:253016761..253033002
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AA seq
815 aa
AA seq
DB search
MEDDTGERSSFVVGFIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYEPM
VIIVSPNKLAADGMVGVSQLADRVCSSTKKVIMARGCFDDTRGAVLVKGLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWYDAMATSNLLDVLLKYFICSSCMTEAEKGVIITNHSLLVT
FNGSFDHMNIDSTSVQNLEIIEPMHSSLLGTNSKKKSLFHMLKTTRTIGGTRLLRANLLQ
PLKDIETINTRLDCLDELMSNEQLFFGLSEALRKFPKETDRVLCHFCFKPKKVTNEVLAS
DNGRRSQIMISSIILLKTALDALPLLSKVLKEAKSCLLGNVYKTICENETYASIRERIGE
VMDEDVLHTRVPFVARTQQCFAVKAGADGLLDMARRSFCDTSEAIHSLANKYRQDFKLPN
LKIPFNNRQGFYFSIPQKDIQGKLPSKFIQVVKHGNNVHCSSRELASLNVRNKSAAKECW
LRTALCLEALMDAIREDVLVLTVLSEVLCLLDMMVNSFAHTISTKPVDRYTRARFTCDGP
LAIDSGRHPILESIHNDFIPNSVFLSEASNMAIVMGPNMSGKSTYLQQVCLLVILAQIGC
YIPARFATLRVVDRIFTRMGTMDSLESNSSTFMTEMKETAFIMQNVSDRSLIVMDELGRA
TSSSDGFAIAWSCCEHLLALKAYSIFATHMESLSALSTMYPNVKILHFDVDVRNNRMDFK
FLLKDGSRHVPHYGLMLAGVAGLPCSVVEAAKKITSRITEKEMKRMEVNCRQYEDIKLTY
RVAQRLMCLKYSDQDEDSLREALQNLKENYIGGSL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacactggagaacgatcaagcttcgtcgttggattcatcgagaaccgtgcc
aaggaggttggagtagctgcgtttgacttgagatcagcatcactgcatctttctcagtat
atagagactagcagctcctatcaaaatacaaagactttactacggttctatgaacctatg
gtgatcattgtttccccaaataaactggcggcggatggaatggtcggagtctcacaacta
gcggacagagtttgttcctccacaaaaaaggttataatggctcgtggttgctttgacgac
accagaggagctgtactggttaaaggtttagctgctaaggaaccgtctgctcttggtctg
gactcatactacaagcaatactatttgtgcttggctgcagcagctgcaactatcaagtgg
tatgatgctatggcgacttccaatttgttggacgtcttgttgaaatacttcatctgctct
tcttgcatgaccgaagcagagaaaggtgtaattataacaaatcactctttgctggtaact
ttcaatggatcttttgaccacatgaacattgattccaccagtgttcagaacttggagata
attgagcctatgcactcttctctattgggcacaaacagcaaaaagaagagtttattccac
atgcttaaaacaactcgaactattggagggactagacttctgagggcaaatcttttgcag
ccattgaaagacatagagacaattaacacacgtcttgattgcctggatgagttgatgagc
aatgagcagctattctttggcttgtctgaggcccttcgtaagtttcctaaagaaacagat
agggtcctttgtcacttttgtttcaagccaaagaaagttactaatgaggtcttggcgtcg
gataatggaagaaggagccaaattatgatatccagcattattcttctcaaaacagccctt
gatgcgttaccgttgctctccaaggtgcttaaagaagccaagagttgtctgctaggaaat
gtttacaagaccatatgtgagaatgaaacatatgcttcaataagggaaagaattggagag
gtgatggatgaagatgtccttcatacacgagttccttttgttgcacgtacacagcagtgt
tttgctgttaaggctggagcagatgggcttcttgatatggctcggagatcattctgtgac
accagtgaagctatacacagtctcgcaaataagtatcgtcaagattttaagctgccgaac
ttgaagatcccattcaataacagacaagggttttacttcagcattccacagaaggacata
cagggaaaactgcccagcaagttcatccaggttgtgaaacatggaaacaatgtccactgc
tcgagtcgtgaacttgcttcattgaatgtgaggaacaagtctgcagctaaagaatgctgg
ttgaggactgcactttgtctggaagcattaatggatgcaatacgagaggatgtcttggtg
cttactgttctttcagaagtgttgtgccttttagacatgatggtaaattcatttgctcac
acaatatcaacgaaaccagttgatagatatactagagctcgttttacgtgtgatggccca
ttggcaattgattccggaaggcaccctattctggaaagcatacacaatgatttcattcca
aatagtgtctttctttccgaagcatcaaatatggctattgtaatgggcccaaacatgagt
ggaaaaagtacttatcttcagcaagtttgcttactggtaatccttgctcaaattggttgc
tatattcctgctcgatttgccactttgagggtggtcgatcgtatttttacaaggatggga
acaatggacagtctcgaatcaaattctagcacgttcatgacagagatgaaggagacggct
tttataatgcaaaacgtttccgatagaagtctgattgttatggatgaattggggagggcg
acttcatcatctgatggattcgcaatcgcgtggagctgttgtgagcatctattagcactt
aaagcgtactcaatatttgctacacatatggaaagtctatcagcactatccaccatgtat
ccaaatgtgaaaattcttcattttgatgtcgatgtgagaaataaccgcatggatttcaag
tttctgctgaaggatgggtcacgtcatgtgccacattatggcctcatgttagcaggggta
gctggattaccatgttcagtggtcgaggctgccaaaaaaatcacatctaggatcacagag
aaggaaatgaagagaatggaagttaattgcagacaatatgaggacataaaattgacttac
cgtgtggctcaacggttaatgtgcttgaaatattctgatcaggatgaagattctttaaga
gaagctctgcagaaccttaaggaaaactatattggtggaagtctttag
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