Capsicum annuum (peppers): 107855966
Help
Entry
107855966 CDS
T04646
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107855966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cann04040
]
107855966
Ion channels [BR:
cann04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107855966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
107855966
NCBI-ProteinID:
XP_016556449
UniProt:
A0A1U8FL08
LinkDB
All DBs
Position
3:complement(228252888..228260447)
Genome browser
AA seq
708 aa
AA seq
DB search
MNHRQDKFVRFQDWNSEKSSEGNFPYKDGAHRGKFGVFSNEFHKALESGSGRIKSIIHAL
NSCLSCLLAKSLGSEKKMLDPQGPFLQKWNKIFVLSCVIAISLDPLFFYIPVIDNNNKCL
HLDRKMEVTASVLRSITDIFYLFHIVLQFRTGFIAPSSRVFGRGVLVEDPWEIAKRYLSS
YFLIDILAVLPLPQVAILIVIPKLRGAKSLNTKNLLKFVVFFQYIPRLLRVYPLYKEVTR
TSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERESTCWQRACGNISACHHSSLYC
DDDHTGFKTLLNSSCPIETPNTTLFDFGIFLDALQSGVVESMDFPQKFFYCFWWGLQNLS
SLGQNLETSTYVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTVRLEEMRVKRRDAEQW
MSHRLLPEHLRERIRRYEQYKWQETRGVDEENLILNLPKDLRRDIKRHLCLALLMRVPMF
EKMDDQLLDALCDRLRPVLYTENSFIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSD
YLKAGDFCGEELLTWALDPHPSNNLPISTRTVQALSEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSQQWRTWAACFIQAAWRRHCRKKLEESLCEEENRLQDALARGGGSSPSLG
ATIYASRFAANALRALRRNTAKKARMADRISPILLQKPAEPDFTAEDK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccggcaagataaatttgtgaggtttcaggattggaactcagagaaaagctca
gaggggaattttccatataaagatggagcacacaggggcaaatttggagtcttctctaat
gaatttcacaaagccctggaaagtggttctggaaggatcaaaagcataatacatgcctta
aattcttgtttaagttgccttctggcaaaaagtttgggatcggaaaaaaagatgcttgat
cctcaaggaccgtttcttcagaagtggaacaaaatatttgtattatcctgtgtaattgcc
atttccttggatcctttgttcttctacattccagtgattgacaataacaacaaatgcctg
catttggatagaaaaatggaggttacagctagcgttttgcgttccatcactgatatcttt
taccttttccatattgtgcttcaatttcgtactggtttcatcgccccttcatcacgtgtt
tttggaagaggcgttttggttgaagatccgtgggaaatagcaaagagatacttgtcctcc
tacttcttaattgatattcttgctgttcttcctttaccacaggttgcaattttaattgta
attcctaagttgcggggtgctaaatctttgaatacgaagaatttgctgaaatttgtcgtc
ttcttccaatatattccaaggctccttcgagtatatcctttatataaggaagtcactaga
acttctggcatacttactgaaacagcatgggctggagctgcgtttaatctcctcctttat
atgcttgccagtcatgtacttggagccttttggtacctgttttctattgaacgtgaatct
acttgttggcaacgagcatgtggaaatatatctgcttgtcatcactcttcattgtactgt
gatgatgatcatacaggattcaaaacattgctaaatagttcatgtcctatagagacacca
aatacgacactatttgattttgggatattccttgacgccctccagtctggtgtagtggaa
tcaatggattttccacagaagttcttttattgtttctggtggggtttgcagaacttgagt
tccctcggtcaaaatctcgaaacaagtacctatgtctgggaaatttgctttgcagttttc
atttccatcgccggcttggtgctattttcgtttctcattggaaatatgcagacatatctg
cagtccacaacagtaagactagaagagatgagggtgaaaagacgagatgcagagcagtgg
atgtctcaccgcttactccctgagcacctccgagagcggatcaggcgctatgagcaatac
aagtggcaggaaactaggggtgttgatgaagagaatttgatcctcaacctgcctaaagac
ctcagaagagatataaagcgtcatctttgtttggctttgctcatgagggttccaatgttt
gaaaaaatggatgaccaactcctggatgcactatgtgaccgactcaggcctgtcctttac
acagagaacagcttcattgtgcgtgaaggtgatccggttgatgagatgctttttataatg
cggggaaaactattgactgtaaccactaatggagggaggacaggcttttttaactctgat
tatctaaaagctggtgatttttgtggagaagagcttcttacttgggctctggatcctcat
ccatcaaataacctcccaatctcaacacgaactgttcaagcactctcagaagttgaagca
tttgctctagtggccgatgatttgaaattcgtagcctctcaattccgtagacttcacagc
aagcaactccgccatacttttaggttttactcgcagcagtggagaacctgggcagcttgc
ttcatacaagcagcatggcgtcgacattgtaggaagaagctagaagaatctctttgcgaa
gaagaaaacagattgcaagatgcattagcaaggggaggtggtagctcgccaagtttgggt
gctactatctatgcatcgagatttgctgctaatgcacttcgtgctttgcggcgcaatact
gcaaagaaagcaaggatggctgacaggatatcacccattttgcttcagaaaccagctgaa
ccagattttactgctgaagataagtaa
DBGET
integrated database retrieval system
