Capsicum annuum (peppers): 107867861
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Entry
107867861 CDS
T04646
Name
(RefSeq) nuclear pore complex protein NUP54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107867861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107867861
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107867861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
107867861
NCBI-ProteinID:
XP_016569804
UniProt:
A0A1U8GNX0
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Position
4:complement(44975202..44984230)
Genome browser
AA seq
371 aa
AA seq
DB search
MFGAQPSSSFGTPFSTPAFGTPSSTPAFGTPSTPSFGTGFGSSLFSTPLSQQSQPHQQQT
SLFQTPQSSGPFSFFTPLNTATQAQSSSFGQPNLGLPLPFANAQLTTQMAPMAPLPFSLA
DRDIQAIVDAYKEEPSNPKYAFKHLLSSVTEPQYRTKPAGVSDIMWAEAMAKLEGMESID
RERLWPQLVQGFKDLSERLKLQDEVIVSDAERLQMTQSNVKMLQRHFQADTLPWIERMRH
KEQGLQRRLLRVMRILEALQGKGCRLPLMKREAELVERLTGITRQLKGSGAELSRRVQNL
LTICRVQNGLGGGSVYLPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDVEIIM
SEEIEMMEGRV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcagccttcctcctccttcggcactcccttttctaccccagcattcggc
acgccttcgtcaaccccagcattcggcacgccgtcaactccatcttttggcactggtttt
ggatcgtcgctattttcaacaccattatcgcaacagtcacagccacatcaacaacaaact
tccttatttcaaacacctcagagttcgggcccgttcagctttttcacacccttgaatact
gctacgcaggctcaatcaagttcatttggtcaacctaatttaggtcttccccttccattt
gcaaatgctcagttgactactcagatggctcccatggctccactccctttttctcttgct
gacagggatatacaagcaattgttgatgcgtacaaggaggagcctagtaaccctaagtat
gctttcaagcatcttttgtccagtgtgacagaacctcaatataggacgaaacctgcaggt
gtatctgatattatgtgggcagaagcaatggccaaacttgaaggcatggagagtattgac
cgtgagcgcctgtggcctcaacttgttcagggcttcaaggatctctccgaacgactcaag
cttcaagatgaagtaatagtttcagatgctgagaggctgcaaatgacgcagagcaatgtg
aaaatgctgcaaaggcatttccaagctgatacccttccttggattgaaagaatgagacac
aaagagcaaggtcttcaaagacgccttttgagggtgatgagaatactagaggcacttcaa
ggtaaaggttgtcgattgcctttgatgaaaagagaagctgaattggtggagaggttgaca
ggcatcacgagacagttaaaaggttctggagctgaactttctaggagggttcagaatctg
ctcaccatatgccgtgttcaaaatggccttggaggtggttctgtttatctccctggttca
actaaaattcatgaacagagtctggctgacatgcaggaggttttgcaacagcaaacagag
gctattgctaggcttggcaatgtattgaagcgagatattcgggatgtggagatcataatg
tctgaggaaatagaaatgatggaaggccgagtatag
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