Crassostrea angulata (Portugese oyster): 128164307
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Entry
128164307 CDS
T09348
Name
(RefSeq) integrin beta-1-B-like
KO
K05719
integrin beta 1
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu04145
Phagosome
canu04512
ECM-receptor interaction
canu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
128164307
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128164307
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128164307
09142 Cell motility
04820 Cytoskeleton in muscle cells
128164307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128164307
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128164307
04515 Cell adhesion molecules [BR:
canu04515
]
128164307
04090 CD molecules [BR:
canu04090
]
128164307
Membrane trafficking [BR:
canu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128164307
Exosome [BR:
canu04147
]
Exosomal proteins
Proteins found in most exosomes
128164307
Cell adhesion molecules [BR:
canu04515
]
Integrins
Integrin beta subunits
128164307
CD molecules [BR:
canu04090
]
Proteins
128164307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
128164307
NCBI-ProteinID:
XP_052684057
EnsemblRapid:
LOC128164307
LinkDB
All DBs
Position
9:complement(26000160..26027317)
Genome browser
AA seq
805 aa
AA seq
DB search
MASDILFLIVTTLLCSSNLIMESTAQELRTDSLTLTQENPCLKDRTTTCGECITISTLCA
FCTDSEYDTNNYPRCDLLTTHQKLINNKPRCKDIVNPSSSLVKTKDDELIDGGTGRDAVQ
LKPQEIDLELRPNDPQTFDLTYRLARNVPVDLYYLMDLSSTMADDKVTLASLGNRIADEM
STISKQFKMGFGSFVDKAVMPFVSTAKNKINSPCPGCEKAYGFRNVLPLNLNTTLFREKV
NLATVSDSLDAPEGGFDAIMQAIACKGQIGWRTGSRRLLLFSTDSGFHYAGDGKLGGILQ
ANDGNCHLDSNGMYTDSSNKDYPSLSQIAVKAKENNVNLVFAVTDEQKDIYHKLIPLIAG
SEIGVLDSDSQNIVKLVRDNYLAIISKVELIVENSDNMEVKIRTKCKGTIEKETNRCENL
SLTDQVVFSVTLGVRSCPPKGQEMKTIKIKPVGLHDTLTVNVRIKCQCDCDSDQKMMENK
NHANCNGNGTFVCGMCVCNEPYFGVKCDCVKGEVTPPEKDRECIQDKSTTTLCNGRGECS
CGRCLCRETQKGTNNYYTGKYCECDDTKCPYYGGLICGGLSRGQCICGVCNCNSGFTGDS
CGCSTDKSPCMYNDLECNGAGVCECGKCKCTNPKYFGSHCQECEGCDQEKCRAHQGCALC
NRVTPGVLTQEQCKTECPRTTAVNTIRKDTTRCETLDKEGCFVYFTYFYDADNNIRVEVQ
REPVCPTKPNVGAIVGGVLAAILLIGIGILIGWKVLITLKDRREYFAFLKSLENAKWETA
YNPLYKPATSTFNNPTFGQKSHPVT
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagatattttgttcttaattgtgacaacattactctgctcttcaaatctaata
atggagtcaacagcacaggaattacggacagattctttgacactgacccaggaaaacccg
tgcctgaaggaccgaactacgacgtgtggggagtgtataacaatatctacactgtgtgct
ttctgtactgattccgaatatgataccaacaactatcccaggtgtgacctgctgaccact
catcagaaactcatcaacaacaaaccaaggtgtaaagacatcgtcaatccgtcatccagc
ctcgtcaaaaccaaggatgacgaactgattgatggaggtacaggaagggacgctgttcag
cttaaaccccaagaaatagatcttgagttacgaccaaatgacccacagactttcgatctg
acttaccgattggctagaaacgttccagttgacctttactacctgatggacctctcatcc
accatggccgatgacaaagtcacgctggccagtctgggaaataggatagctgatgaaatg
agcaccatctccaaacaatttaagatgggttttggttcctttgtggacaaggctgtcatg
cctttcgtcagtacggctaaaaacaaaattaacagtccttgtccaggatgcgagaaagct
tacggattcagaaatgtattgccattaaacctaaatacaacactatttagggaaaaagtt
aatttagctacagtatctgatagcctggacgctcctgagggtgggtttgatgccatcatg
caggccatagcttgtaaggggcaaattggatggagaactggatctagaagacttctgttg
ttttcaacagattctggatttcactacgccggggatggaaaattgggtggcatccttcaa
gcaaatgacggaaattgtcaccttgattcaaacggaatgtacacagatagttctaacaag
gactacccttccttaagtcagattgctgttaaagccaaggaaaacaatgtgaaccttgtt
tttgctgtcacggacgaacagaaggatatataccacaagctgattccattgattgcagga
tcagaaatcggagtgttagattcagattcacagaatattgtcaaactagtccgagacaat
tatttggccatcatatcaaaagtagaattgattgttgaaaattcggacaatatggaagtg
aaaattaggactaaatgtaaaggaaccattgaaaaggaaacaaacagatgtgaaaatttg
agtcttacagaccaagtggttttcagtgtgacgttgggagttaggagttgtcccccaaaa
ggtcaagagatgaagaccataaagatcaaacccgtcggccttcatgacaccctgacggtc
aatgtccgcatcaagtgtcagtgcgactgtgactcggaccaaaaaatgatggaaaacaaa
aatcacgcgaattgtaatggaaatgggacctttgtgtgcggaatgtgcgtttgtaatgaa
ccgtactttggcgtcaaatgcgattgtgtaaaaggggaagtaactccaccagaaaaagat
agagaatgtattcaggataaaagcacgactaccctctgtaacggtcggggagaatgtagt
tgtggaagatgtttgtgccgagagacgcagaagggcactaataactactacaccggcaaa
tactgcgagtgtgacgataccaagtgtccctactatggtggactcatctgtggaggtctg
agtcgtggacagtgtatctgcggagtctgtaattgtaacagcggattcacgggggacagc
tgtgggtgtagcaccgacaaaagcccctgcatgtacaatgatctggagtgtaatggagct
ggagtttgtgagtgtggaaagtgcaaatgtacaaatcctaaatattttggaagccattgt
caggagtgtgagggttgtgaccaggagaaatgtcgggcacaccaaggctgtgcgctgtgt
aatagggtcacacctggtgtactgacccaggaacagtgtaagacagaatgtccgcgcact
actgctgtcaacacaatcagaaaggacacaactcgttgcgagacgttggacaaggaaggc
tgttttgtttactttacctatttctacgacgctgataacaatataagggtagaagtccaa
agagaaccagtgtgtcccactaagcccaacgtaggtgctatagttgggggagtattagcg
gccattttgctcattgggatcggaatccttattggctggaaagttctcatcacccttaaa
gacagaagagaatattttgcgtttttgaagtcgctcgaaaacgccaaatgggaaacggca
tacaatcctctctacaagccagctacttcgacctttaacaaccctacatttgggcaaaag
agtcaccctgttacatag
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integrated database retrieval system