Crassostrea angulata (Portugese oyster): 128168286
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Entry
128168286 CDS
T09348
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
Organism
canu
Crassostrea angulata (Portugese oyster)
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
128168286
NCBI-ProteinID:
XP_052690447
EnsemblRapid:
LOC128168286
LinkDB
All DBs
Position
10:complement(5222682..5239332)
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AA seq
1112 aa
AA seq
DB search
MEHDDSSDSVDISMMKNGIAPDYPPPHSDGPYIDIVEQPQARGFRFRYECEGPSHGGLQG
EKSEKYRKTFPSIKIRNYNGAARIVVTLVTNEAIPKPHAHKLVGKNCNDGSCVVELKPNQ
NVITFPNLCIQHVTRRKASEVIEYRILDSMKLDKQVKLGNLNVQTDLSDDEKSQASKQSK
QLAKDMQLNVVRLCFQAYLRDDSGKIFHLLPPILSTAIYDSKAPGANALKICRMDKYGGC
CTGNEEVFLLCEKVQKDDIQVRFVEQDDDGKTIWEAFGNFGPFDVHRQYAIVFKTPAYRN
PNIDRPVSVIIMLQRKSDTETSEPKSFTYFPQSFDKDEIAKKRKKTLPSYPGSNGFGGGG
GGGEDGRPSINNFHNGGLSFGPPQGNIPVMVNDSEQSLSNDSLHNPSPPPKISNATKRRI
NKAKRQGIKPSEVEVDGNRVQGLPTFISEPSSLQVAGPPEIHVTSAANFQPNHNINLHQF
NHVNPQNFASHIYVPRGGGGLTTARDAMNDSTSSSSGMDEVDATVCDKNFRTQRDNGSFV
LRKDLMMPQDTSPDSGRETPNDIESDGQPLVTVQSIMEACVTETADVTEKTAELKLEAIC
SSEEQVLAQSVDTASVDSGESIESAVSERCDQSVQTDKDEVVRTTERTVQALQTYATTGD
IRQLLLVQRYLTSVPDQNGDIPLHTAIINGNTEVVNNLLDVMQTMPNLWLKINAYNNLLQ
TPLHLAVLTGQEEVIDRLLCAGANTKLPDRNGNNPAHLAVLMGNTSCLARLLKYQRPFST
PKNPFPELNMKNFDGFAPAHIAAQKGNLQAIKLLVRCKADINMADGKSGKTPLHYAAEEN
DLSVSSYLILEAGAFVDAICFNGNTALHIACGRQNSGMVALLMAAGANPEIENSEALKNE
LSSEDEEEEVEKVLPGHKPRHYAAGNSRILKILNGEPYGGDSIGGMKSLTGRSDFYLEAN
SLLASEDFQGPPTLRSSLSSVTCPPTISAVLSSSDDGDIEKISYPVRVQLSKLLDPLQAG
SDWVALAERLGLRQSVEGHQGGFSPTRLLLTFYESCGGTVSKLLEALVAMERYDAVELIN
SALSIRTDDCKREAIGRDIAGGRPEGHLQVTH
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgacgattcttcggattctgttgatatttcaatgatgaagaatgggatagcg
cccgactaccctcctccacactctgatggtccctatatagacatagttgagcagcctcag
gcgcggggattccgttttcgatacgagtgtgaggggccctcccatgggggcctccaggga
gagaagagcgagaagtataggaaaacttttccttccatcaaaattaggaattacaatgga
gctgctcgtattgtggttactctggtaaccaatgaagctattccaaaacctcatgcccac
aagttggtggggaaaaattgtaatgatggctcctgtgtggttgaactgaagccaaaccaa
aacgtaataacgtttccaaacctgtgtattcagcatgtgacccgaaggaaagccagtgag
gtcattgagtaccggattctggattccatgaaactggataaacaggtcaaactcgggaat
ctcaatgttcagactgacctatcggatgatgaaaaatcccaagccagcaagcagtctaag
cagttagccaaggacatgcagctgaatgtggtcaggctatgtttccaggcctacctcagg
gacgacagtggaaagatcttccacctcctgcctcctattctgtctacagcaatctatgac
agcaaggcaccaggagccaatgctttaaagatctgtcgcatggacaaatatgggggctgt
tgcacagggaacgaagaggtcttcttgttatgtgaaaaagtgcaaaaagacgacatacaa
gttcgatttgtggagcaggatgatgatggtaaaacaatatgggaagcctttggaaacttt
ggtccatttgatgtacatagacaatatgccattgtgtttaagactccagcgtacaggaac
ccaaacattgaccggcccgtgtctgtcattataatgttgcagagaaagtcagatacggag
acaagtgaaccaaagtccttcacttacttcccacaatcctttgacaaggatgaaattgcc
aaaaagaggaagaagacacttccgagctaccctggcagcaatggatttgggggcgggggc
ggtgggggagaggacgggcgaccctctataaacaacttccacaatggaggcttatcattt
ggaccaccccaaggaaacatacctgtaatggttaatgattcagagcaatctttgtcaaat
gacagtctccacaatccttcaccgccaccaaagatttccaacgctacaaagagacggata
aacaaagcaaagcgccagggtataaaaccctcggaagtagaagtcgacgggaacagagtc
cagggcttgcctaccttcatcagtgagccctcgtcactccaagtcgccggacctccagag
attcatgtgacctctgcagcaaacttccagcccaaccacaacatcaacctgcaccagttt
aatcacgtcaaccctcagaattttgcatcacatatatacgtccctcggggcgggggaggc
ctgaccactgccagagatgccatgaacgactcgacatcatcttcctcaggaatggatgaa
gtggatgccactgtctgtgacaagaactttcgaacacagagagacaatgggtcatttgtt
cttcgcaaggatctcatgatgccccaggacaccagtcctgactcaggaagggagacaccc
aatgacattgagagtgatggacagcctctagtgaccgtacagagtattatggaggcctgt
gtgacggaaactgcagatgttactgaaaaaacagcagaattaaagctggaagccatctgc
agcagtgaggaacaggttcttgcccaaagtgtggacactgcatctgttgactctggagaa
agcattgagtcagcggtgtcggagagatgtgaccaaagtgtccagacagacaaggatgag
gtggtgcggacaaccgagaggacggtgcaggccttgcagacatacgccacgacgggagac
atccgacagctcctccttgtacaacgctaccttacctcagtgccagaccagaatggcgac
atacctctgcatacagctatcattaatggtaatacggaggttgtaaacaatttgctggat
gtgatgcaaaccatgccaaacctctggctcaaaatcaatgcctacaacaacttattacag
actccgctacatctagcggtactcacaggtcaggaggaagtcattgatcgcttgctgtgt
gcgggggccaacactaaactcccagacagaaatggtaacaaccctgctcacttagctgta
ctgatggggaacaccagctgtctggccagactgctgaagtaccagcggccattctccacc
cccaaaaatccattcccagagctgaacatgaaaaactttgatggctttgcaccagcccat
attgctgcacagaagggaaacctccaagcaatcaagctactggtgcggtgtaaggctgac
atcaacatggcagatggtaaaagtggtaaaacccctctccattacgcagcagaagaaaat
gacttgtctgtcagtagttatctcattctggaggcaggagcttttgtggatgccatatgc
tttaatggaaacacagctttacacattgcctgtggtcgacagaacagtggaatggtagct
ctattaatggctgctggagcgaacccagagatcgagaactcagaggctctgaagaatgag
ctgtccagtgaagacgaggaagaggaggtagaaaaggtcctcccaggacacaagcctcgt
cactatgcagcagggaactcaaggatattaaagattctgaatggggagccctatggaggc
gattctatcgggggaatgaagagtctgacaggaaggagcgatttttacctggaggccaac
agtctgctggcctctgaggatttccagggtcccccaacattgaggtcctcactgtcctcc
gtcacatgtccccccacgatcagtgctgtcctgtccagcagtgatgatggagacattgag
aagatcagttaccctgtgcgtgtgcagttgtcgaagcttttggacccccttcaggcgggc
tctgactgggtagccctagcggagagattgggactgagacagtccgtggaaggtcaccag
gggggcttcagtcccaccaggctccttctcaccttctacgagtcatgtggaggcaccgta
tctaagttgttggaagcactggttgccatggagagatatgatgctgttgagttaatcaac
tcagccctcagcatacgaacagatgactgtaaaagagaagccattgggagagacattgct
ggaggtagacctgagggtcacttgcaggtcactcattag
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