Crassostrea angulata (Portugese oyster): 128177162
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Entry
128177162 CDS
T09348
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu00860
Porphyrin metabolism
canu00970
Aminoacyl-tRNA biosynthesis
canu01100
Metabolic pathways
canu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
128177162
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128177162
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
canu01007
]
128177162
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
canu03016
]
128177162
Enzymes [BR:
canu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
128177162
6.1.1.17 glutamate---tRNA ligase
128177162
Amino acid related enzymes [BR:
canu01007
]
Aminoacyl-tRNA synthetase
Class I (A)
128177162
Transfer RNA biogenesis [BR:
canu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
128177162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHEP-TRS
tRNA-synt_1c
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
GST_C
GST_C_3
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
128177162
NCBI-ProteinID:
XP_052699703
EnsemblRapid:
LOC128177162
LinkDB
All DBs
Position
3:36336391..36357235
Genome browser
AA seq
1691 aa
AA seq
DB search
MALNVSFQKDKIPAASLLTAEYLSQKNLLKWSLGQSTTLTVDGTTLNSNYTICRFLANKF
KDLGLYGNSILEASEVDHWLTFASGSLSCASKFSTALTYLDKSLEPVTYIVGQALTLADF
AIWEVLQSNSKFQSLLASGDAGVNVTRYYKFLSNQSAFKVAQKNLPQVKGNAEKKSDKKS
EPSAKKDEGKFVDLPGAEIGKVVTRFPPEASGYLHIGHAKAALLNYHYREIFKGTLIMRF
DDTNPAKENAEFEQVILEDVAMLGIKYDKFSYTSDHFDRIQELCEKMMKIGKAYVDNTDP
ETMKKERDERKDSVNRNNSVEKNLAMWEEMKKGSPAGQKCAVRAKIDMTSDNGCMRDPTL
YRCKLEPHIRTGTKYKVYPTYDFACPIVDSVENVTHALRTTEYHDRDEQYYWVLDTLSLR
RPYIYEFSRLNLQNTVLSKRRLTWFVNEGIVDGWDDPRFPTVRGVLRRGMTVEGLKQFIV
SQGSSKSVVMMEWDKIWAVNKKVIDPVVPRFTALLKEEAIPVHVKGASTGVIQKPKHPKN
EGVGMKDVWYSPLVYVEGADAELLKEGELTTFINWGNLEITKINKKGNKIVSLEALTRLD
NTDYKKTQKITWLAETDRAPFTPTVCVQYDHIITKPVIGKEEDFKQYANRDSKKEMVMFG
DPCLSELKKGDIIQLQRRGYFICDQPYLPTSPFTGRSSPCVLLNIPDGHTKEMPTSGSKH
KEEGSSKEKSQSKKGKAAEKSPPETPSSGIDLADLDKRIRSQGERVRDLKTKKAPKEQVD
AEVKILLALKAEYKSGSGSDWKPDTKPVHPVSCPPASSSMNAHDLNDQIIKQGNLVRDLK
GKKAPKAEIDEAVKVLLVLKAEYKSVTGSEWKPGVTPPAAAPSGGADVSNINDKIVAQGN
KVRDLKAAKAPKGDIDAAVKDLLALKAEYKAATGKDWKPQAATSAPPATAAKSGGSGNEA
DLNNQIVAQGNKVRDLKAQKAAKGDIDVEVKALLALKTEYKAATGKDWKPQAATSAPPAT
AAKSGGSGNEADLNNQIVAQGNKVRDLKAQKAAKDKVTAEVQLLLKLKADYKAATGKDWT
PPPAGSTPQKVEPPKAMPVSGTEAENLKKKIDEQGEKVRKLKTAKAPESEVKKEVDTLLS
LKTQYKDLTGEDLAGGGRKDKKDKKKEKKPAEKKEEVKAEDTSKDGKKVTRLGLEAKKEE
NLSEWYSQIITKAELIEYYDVSGCYILRPWSYAIWESIKEFFDREIKKIGVENTYFPMFV
SHQALEREKTHIADFAPEVAWVTRSGKSELAEPIAIRPTSETVMYPSYAKWIKSHRDLPL
KLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFSTAQEAQEEVYVILELYARVYEELLA
IPVVRGRKTEKEKFAGGDFTTTVEAYISASGRAIQGATSHHLGQNFSKMFEICIQDQETL
EKQYVYQNSWGLTTRTIGVMCMIHGDNKGLVLPPNVASVQVIIVPCGITANLSKKDEQEL
MDKCEALKKELLAVDIRARTDLRDNYSPGWKFNHWELKGVPIRVELGPRDIKQNQLVAVR
RDTAEKMTLKNQNIGQQLKDLLKNIQDSLFNKAKSDLDSYMIVSHEWGHFCDSLDNKKII
QAPFCGDEDCEDKIKKDSARDAVVEEGAPSMGAKSLCIPFKQPETLKPGTKCINPACKRD
AKFFTLFGRSY
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggcactgaatgtgtcttttcagaaggataaaattcctgcagcttcacttttaacagca
gaatacctgtcacagaaaaatttattgaaatggtccttgggtcagagtacaaccctcact
gtggacggtactactttgaatagtaactataccatatgtcggttcttggccaacaagttc
aaagatttgggtctttacgggaattcaatccttgaagcctctgaggtcgatcactggctg
acctttgcctcgggctccctgtcttgtgcctccaagttctccacggccctgacctacctg
gacaagtctttggagccggtgacctacattgtgggtcaggcattgactctggccgacttt
gctatctgggaagttctccagagcaatagcaagtttcaatctctgttggcatcaggagat
gcaggtgttaatgtcactcgctactacaagtttctcagcaaccagtcagcattcaaggtt
gctcagaaaaacctgccacaggttaaaggcaacgcagagaagaaaagtgacaagaagtct
gaaccatctgcaaagaaagatgaaggaaagtttgtggacctaccaggggctgagattgga
aaagttgtcactcgtttcccaccagaggctagcggatatttacatattggtcatgcaaag
gcggccttgctgaactaccattatagggagatatttaagggaacactcatcatgagattc
gatgataccaatccagccaaggaaaacgcggagtttgaacaggtgattctggaggatgtg
gccatgctgggcattaagtacgacaagttctcctacacctcggaccactttgatcggatc
caggaattgtgtgagaaaatgatgaagatcgggaaagcctatgtcgacaacactgaccca
gagaccatgaagaaagagcgagatgaacgcaaggactctgtcaacagaaataacagtgtg
gagaagaacttggctatgtgggaggagatgaagaagggaagccctgctggtcagaagtgt
gcagtgagggccaagattgacatgacctccgacaatgggtgtatgagggaccccacactg
taccgctgtaagttggagccccacatcaggaccggcaccaagtacaaagtgtaccctacc
tatgactttgcctgtcctattgtggacagtgtagagaatgtgacgcatgccctcaggacc
accgagtaccacgacagggacgaacagtactactgggtcctggacactctaagtctaaga
cggccttacatctacgagttcagcagactgaacctacaaaacactgttctttccaaaagg
aggctcacctggtttgtcaatgaaggaatagtggatggatgggatgatccacggttcccg
acagtgaggggggtactcagaaggggaatgaccgttgagggcctgaaacagtttattgtg
tcccaggggtcttctaagtctgtggtgatgatggagtgggataaaatctgggcagtcaac
aagaaggtgattgacccagttgttccaagatttacagctttgctgaaggaggaagccatc
ccagttcatgtgaaaggtgcctcaacaggcgtgattcagaaacccaaacatcctaagaat
gaaggtgttggaatgaaggatgtctggtactctccccttgtgtatgtagagggagctgat
gctgagctgttgaaggaaggggagctcactacatttatcaactggggcaacttagaaata
acaaagataaacaagaaagggaacaagatagtttccttggaggctttaaccagactggat
aatacagattataagaagacccagaagatcacctggctggcagagactgaccgcgcccct
ttcacgcccactgtgtgtgtccagtatgaccacatcatcacaaagcctgtcattggtaaa
gaggaggactttaagcagtacgccaacagagacagcaagaaagagatggtgatgtttggt
gatccatgtctgagcgaactgaagaagggagacataattcagctacagaggcgaggatac
tttatctgtgatcagccctacctccccaccagtccgttcacgggtcgcagtagtccctgt
gttctgttgaacatccccgatggtcataccaaggagatgcccacctcaggatcaaaacac
aaagaagaggggagcagcaaagagaaatcccagagcaagaaaggaaaagctgctgagaaa
tctcccccagaaaccccctcctctggtattgaccttgcggacctagacaaaagaatcaga
agtcaaggggaaagagttcgcgacctcaaaaccaaaaaggctccaaaggagcaggtagat
gcagaagtcaagattctcttggcactgaaggctgaatataagtctggctctggttcagac
tggaagccagataccaaaccggttcatccggtgtcctgtccaccagcctcaagttcaatg
aatgcccatgaccttaatgatcaaatcatcaaacagggcaacttggtcagagacttgaaa
ggaaagaaagctcccaaggctgaaattgatgaggcagtaaaggtacttttagttctgaag
gcagagtacaaaagtgtgacaggaagtgaatggaaacctggggtcacacccccagcagca
gcgccatctggtggagcagacgtcagcaatatcaatgataaaattgtagcccagggcaac
aaggtcagggatttgaaggcagccaaagctccaaagggtgacatcgatgccgcagtgaaa
gacctattagctctgaaggcagaatacaaagcagccacaggaaaagactggaaaccacaa
gctgccacatcagcaccaccggccacagccgccaagtctggtggatctggaaacgaggct
gacctaaataatcaaattgttgcccagggaaacaaagtcagggatctcaaagcccaaaaa
gcagctaagggtgatatagatgttgaggtaaaggctctactggctctgaagacagaatac
aaagcagccacaggtaaagactggaaaccacaagctgccacatcagcaccaccggcgaca
gcagccaagtctggtggatctggaaacgaggctgacctaaataatcaaattgtcgcccag
ggaaacaaagtcagggatctcaaagcccagaaagcagctaaggataaagtaacagctgag
gtacaattattgctaaagctaaaggctgactacaaagcagcaacagggaaagactggaca
ccaccacctgccggatccactccccaaaaggtagaaccaccaaaagccatgccagttagc
ggcacagaggccgagaatctcaaaaagaaaattgatgagcagggggagaaagtgcgaaaa
ctcaagacagccaaagcaccagagagcgaagttaagaaagaggtggacacccttctgtca
ctgaagactcagtataaggatctaacaggggaggatctagcagggggtggaaggaaagac
aagaaggataagaaaaaggagaaaaaaccagctgagaagaaagaagaagtgaaagcagag
gatacctcaaaagatgggaaaaaagttacaagacttggacttgaagcaaagaaagaagag
aatttatcagaatggtactcgcagatcattacaaaagcagagttgatagagtactatgat
gttagtggctgttacattctacgcccctggtcatacgctatttgggagagcatcaaagaa
ttcttcgaccgagaaatcaagaaaataggcgtcgaaaatacttacttccccatgtttgtc
tctcatcaagcactggaacgggaaaaaactcacattgcagattttgcaccagaggttgcg
tgggtaacaagatctggtaaatcggagctggcagaacccatcgcaatccgtcccactagt
gaaactgtgatgtacccttcttatgccaagtggatcaagtcccatagagatcttccttta
aaattgaatcagtggtgcaatgtggtgaggtgggaattcaagcatccacagcctttcctt
aggaccagagagtttctgtggcaggaaggacacacagctttctcaacggcccaggaggca
caggaggaggtgtatgtaatactggaactttatgccagagtgtacgaagaactgctggct
attccagtagtcagaggtagaaaaacagagaaagagaagtttgcaggaggagactttact
accacagtggaggcctacatctcagccagtgggagagctatacagggtgcaacatctcat
catttaggacaaaacttttctaagatgtttgaaatttgtatacaagatcaagaaacactt
gaaaaacaatatgtgtaccagaattcttggggactgacaactcggaccattggagtgatg
tgtatgattcatggtgacaataaagggctggtgctgcctcctaatgttgccagtgtacag
gtgataattgttccctgtggtattacggctaatttatccaagaaggacgagcaggaactg
atggataagtgtgaggctctaaaaaaagagctcttagctgtcgacatccgggctcgaaca
gatctgagagacaactactccccaggatggaagttcaaccactgggagctgaagggggta
ccaatccgcgtggagctgggacctcgtgatatcaagcagaaccagctggtggctgtcaga
agagatactgctgagaaaatgacactgaagaaccagaacattggacagcaactcaaggac
ctacttaaaaacatccaggacagtctattcaacaaggctaaatctgacctggacagctac
atgattgtctcccatgaatggggtcatttctgtgattcattggacaacaagaaaattatc
caagcccctttctgtggggacgaagactgtgaggacaagatcaagaaggacagtgccagg
gatgctgtggtggaagaaggagccccctcaatgggagccaagagtctatgtattcccttc
aaacagcccgagaccctgaaaccaggcaccaagtgcataaacccagcttgtaaaagagac
gccaagttctttactttgtttggaaggagctactag
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integrated database retrieval system
