Crassostrea angulata (Portugese oyster): 128190321
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Entry
128190321 CDS
T09348
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
canu
Crassostrea angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128190321
Spliceosome [BR:
canu03041
]
Common components
Common spliceosomal components
General mRNP proteins
128190321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
PRP38_assoc
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
128190321
NCBI-ProteinID:
XP_052718298
EnsemblRapid:
LOC128190321
LinkDB
All DBs
Position
6:55705608..55712991
Genome browser
AA seq
547 aa
AA seq
DB search
MADDLDVEAMLEAPYRKEDDGRGDADRDREKRKKRSGSRDKGRDKDRDRDRDRDRERDRD
RRRSRSRDRHRDGDKERHRGHDRHRGRDRDRERREKRRSKSREKRRRSRSKSKERKKSRS
PERERRQRSNSKSPMRYTRQPGPELTPEERDARTVFCMQLSARIRPRDLEEFFSSVGKVR
DVRLIMDNKTRRSKGISYVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRVGNPTS
ILTKGNIGPMRLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHD
SEDAKKALEQLNGFELAGRPMKVGHVTERQGEIQGASMLDSDEMDRAGIDLGATGRLQLM
AKLAEGTGFQIPEYAVSALNITQQAPGVASAAPPAGPAPNVSAILGSQAAGQDSTAPPIA
TQCFMLSNMFDPNAESRSSWDQEIRDDVIEECNKHGGVLHLYVDKASPQGNVYVKCPTIS
AAVASVRALHGRYFGGKMITAAYVPLPNYHSLFPDAVRANQLLLPSTQALQAGFPSTMFP
AMQPVIR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatttggacgtagaagctatgttggaggctccttacaggaaggaggatgac
ggaagaggagatgctgatagagatagagagaagagaaaaaagagaagtggaagcagagac
aagggtcgtgacaaggacagagacagggaccgagatagggatcgagaacgtgacagggat
cgtcgtaggagcagaagtcgagaccgtcatagggatggagacaaagaaaggcataggggt
catgatcgacatagagggcgtgaccgagacagagaacgacgagaaaaacggcgtagtaaa
agccgagaaaaacgcaggaggagtcgaagtaaatcaaaagaacgcaagaaaagtcgatcc
ccagaaagagaaagaagacagagaagtaacagcaaaagccccatgagatacacaaggcag
ccaggtcctgagttaactccggaagaaagagatgcaaggactgttttctgtatgcagctc
tctgccagaattcgcccaagagaccttgaagaattcttctcctctgtgggaaaggtcaga
gatgtgagactaatcatggacaataaaacaaggaggtcaaaaggcatttcttatgtagaa
ttccaggacactgattctgtaccattagccattggacttactaatcagaaattactgggt
gttcctatcatagtacagcactctcaggctgagaaaaaccgagtaggaaaccctacaagc
atcttaacaaaaggaaatattggacctatgaggctgtatgtgggttctttacacttcaac
ataacagaggaaatgctcaggggaatatttgagccatttggaaagattgacgacattaaa
ttgatcagagaccatgaaacaaacagatcacaaggatatggttttataacattccatgat
tcggaagatgcaaagaaagctttagagcagctcaatgggtttgagctggctggccgtcca
atgaaagtaggccatgtgacggagagacagggagagatccagggggcttccatgttggac
agtgatgagatggaccgggcagggatagacttgggagccactggtcgcttgcagctgatg
gctaaattagcagaaggcacaggtttccagatacctgagtatgctgtgtcagcactgaac
ataacccagcaggcaccaggagttgctagtgctgcaccccctgctggaccagcccctaat
gtgtcggctatactgggtagtcaggctgctggacaagatagcactgcccctccaatagct
acccaatgcttcatgttgtccaacatgtttgatcctaatgcagagtctcggtcaagctgg
gatcaggaaatcagggatgatgtgatagaagaatgtaacaagcatggtggagtcctacat
ctgtatgtagacaaggcttcaccccaaggaaacgtctatgtcaagtgtcccacgatatca
gcagctgttgcctccgttagagcacttcatgggaggtattttggaggcaaaatgattaca
gcggcctatgtacccctcccaaactaccactccctgttccctgacgcagtgagagccaat
cagctgctgcttccgtcgacccaggcgctacaggccggattccccagcaccatgttcccc
gccatgcagcctgtcatcagatag
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