Candidatus Paracaedimonas acanthamoebae: IM40_07060
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Entry
IM40_07060 CDS
T03240
Symbol
rnhA
Name
(GenBank) ribonuclease H
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM40_07060 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caq03032
]
IM40_07060 (rnhA)
Enzymes [BR:
caq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
IM40_07060 (rnhA)
DNA replication proteins [BR:
caq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
IM40_07060 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
IM40_07060 (rnhA)
Elongation factors (archaeal)
IM40_07060 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
AIL13307
LinkDB
All DBs
Position
complement(1339981..1340466)
Genome browser
AA seq
161 aa
AA seq
DB search
MEQTSAQKNTVEIFTDGACSGNPGPGGWGVILRAESGEEKEFAGGETNTTNNRMELIAAI
KGLEALKKPVFVKLYTDSQYLQNGMKLWLSKWKSNGWKTAGRDDVKNMDLWQTLDALASQ
YEIEWHWIKGHSGHPENERADVLARNAIVQIMMSQEINPQD
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacatccgcgcagaagaacaccgttgaaatttttacagatggcgcttgtagt
gggaaccctggtccagggggatggggtgttattttgcgtgcggaatctggggaagaaaaa
gaatttgcgggcggtgaaaccaatacaacaaataatcgtatggagttgattgcagccatt
aaaggccttgaagcccttaaaaaaccagtttttgttaaactttacacagatagccaatat
cttcaaaatggaatgaagctttggctttctaagtggaaaagcaacggttggaaaacggct
gggcgtgatgatgttaaaaatatggatctttggcaaacgcttgatgcattggcatcacaa
tatgaaattgaatggcattggattaaaggacattcagggcaccctgagaatgaacgtgcg
gatgttttagcaagaaatgctattgtacaaattatgatgtctcaagaaatcaatcctcaa
gattag
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integrated database retrieval system
