Collimonas arenae: LT85_0003
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Entry
LT85_0003 CDS
T03512
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
care03032
]
LT85_0003
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_0003
Enzymes [BR:
care01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LT85_0003
DNA replication proteins [BR:
care03032
]
Prokaryotic type
DNA Topoisomerases
LT85_0003
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LT85_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AIY39163
UniProt:
A0A0A1F354
LinkDB
All DBs
Position
3168..5543
Genome browser
AA seq
791 aa
AA seq
DB search
MYIGDTSDGTGLHHLVFEVLDNSIDESLAGHCTEIHVTIHSDNSISITDNGRGVPTGIKF
DDKHDPKRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNGLSKLLKLTIRRDGKV
HYMEFVRGVPQNRETETIDGMLVSPIKVIGDTDKRGTEVHFWADEEIFTHVEFHYEILAK
RIRELSFLNNGVHIKLTDQRTGKEENFAFEGGTRGFVEYINKAKSVLHPTIFQATGEKDG
VSVDVSMQWNDAYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVLNKYIEEHDFAKKAKVE
TSGDDMREGLTCVLSVKVPEPKFSSQTKDKLVSSEVRLPVEEIVAKTLNDYLQERPNDAK
IICGKIVEAARARDAARKARELTRRKGVMDGLGLSSKLADCQEKDPALCELYIVEGDSAG
GSAKQGRDRKFQAILPLRGKVLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNADKLR
YHRIIIMTDADVDGAHIRTLLLTLFYRQMPQLVERGHIYIAQPPLYKVKHGKDERYLKDD
AEEVSYMMQVALNDAALVPSEGADPISGPALAELVRQYNTANAIITRLTRAIDGAALTSI
MTGVTLKLDTLADAEISRAALEASINEPSVQVVLKSDELSDKHALRINRRYHGNIKASAI
DSDFVASPDYAVLTNAAATFKGLIGAGAVIRRGAGEKTKESAIIDFHQAMAWLRDEAERG
VSKQRYKGLGEMNPSQLWETTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIE
LNALQAGNIDV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcggcgacacctctgacggcacgggcctgcaccacctggtgttcgaagtgctg
gacaactccatcgacgaatcgctggcgggccactgcaccgaaatccacgtaacgatccac
tccgacaactcgatctcgatcaccgacaacggccgcggcgtgccgaccggcatcaagttc
gacgacaagcacgacccaaagcgcagcgcagccgaaatcgtcatgaccgagctccacgcc
ggcggcaagttcgaccagaactcctacaaggtatccggtggtctgcacggtgtgggtgtg
tcttgcgtcaacggcctgtccaagctgctcaagctgaccatccgccgcgacggcaaagtg
cattacatggagttcgtccgcggcgtaccgcaaaaccgcgaaaccgaaaccatcgacggc
atgctcgtctcgccaatcaaagtcatcggcgacaccgacaagcgcggcaccgaagtgcac
ttctgggccgacgaagaaatcttcacgcatgttgaattccactacgaaatcctggccaag
cgcatccgcgaactgtccttcctcaacaacggcgtgcacatcaagctgaccgaccagcgc
accggcaaggaagaaaacttcgccttcgaaggcggcacccgcggctttgtggaatacatc
aacaaagccaagagcgtcctgcacccgaccattttccaggccaccggcgaaaaagacggc
gtctccgtcgacgtctccatgcaatggaacgacgcctacaacgaacaagtactctgcttc
accaacaacatcccgcaacgcgacggcggcacccacttaacagggctgcgcgccgcgatg
acccgcgtgctcaacaagtacatcgaagagcatgatttcgccaagaaagccaaggtagaa
accagcggcgacgacatgcgcgaaggcctcacctgcgtgttgtcggtaaaagtacccgag
ccaaaattcagctcgcaaaccaaagacaagctggtctccagcgaagtgcgcctgccggta
gaagaaatcgtcgccaagacgcttaacgactacctgcaagaacgcccgaacgacgccaag
atcatctgcggcaagatcgtcgaagccgcccgcgcccgtgacgccgcccgtaaagcgcgc
gaactgacgcgccgcaaaggcgtcatggacggcctcggcctctcctccaaactggccgac
tgccaggaaaaagaccccgccctgtgcgaactctacatcgtcgagggtgactccgcgggc
ggttcagccaagcaaggccgcgaccgtaaattccaggccatcctgccgttgcgcggtaaa
gtgctcaacgtcgaaaaagcccgcttcgaaaaaatgctgtcctccgagcagatcaccacc
ctgatcgccaccctcggcaccagcatcggcgccgatgaattcaacgccgacaagctgcgc
taccaccgcatcatcatcatgaccgatgcggacgtcgacggcgcccacatccgcaccctg
ctgctgaccctgttctaccgccagatgccgcaactggtagagcgtggccacatctacatc
gcccagccgccgctctacaaagtcaagcacggcaaggacgagcgctatttgaaagacgac
gccgaagaagtctcctacatgatgcaggtagccctgaacgacgccgccctcgtcccaagc
gaaggcgccgacccgatcagcggcccggccctggccgagctggtgcgtcagtacaacacc
gccaacgccatcatcacccgcctcacccgcgcaatcgacggcgccgccctcacctccatc
atgaccggcgtcaccctcaagctcgatacgctggccgatgcagaaatctcgcgcgcagcc
ctggaagcctccatcaacgagccatcggtccaggtcgtcctcaaatccgacgaactctcc
gacaagcacgccctgcgcatcaaccgccgctaccacggcaacatcaaagccagcgccatc
gacagcgacttcgtcgccagccccgactacgcagtgctgaccaacgccgcagcaaccttc
aaaggcctgatcggcgccggcgcagtcatccgccgcggcgcaggagaaaaaaccaaagag
tcagccatcatcgacttccaccaagccatggcctggctgcgcgacgaagcagaacgcggc
gtcagcaagcagcgctataaaggtctgggagaaatgaacccgtcgcaattgtgggaaacc
acgatggacccgacagtgcgccgcttgttgaaggtgcagattgaggatgcgattgctgcg
gatcagattttcatgaccttgatgggggatgatgttgaaccgcggagagcgtttattgag
ttgaatgcgctgcaggctgggaatattgacgtctga
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