Collimonas arenae: LT85_2895
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Entry
LT85_2895 CDS
T03512
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
care
Collimonas arenae
Pathway
care00020
Citrate cycle (TCA cycle)
care00785
Lipoic acid metabolism
care01100
Metabolic pathways
care01110
Biosynthesis of secondary metabolites
care01120
Microbial metabolism in diverse environments
care01200
Carbon metabolism
care01210
2-Oxocarboxylic acid metabolism
Module
care_M00009
Citrate cycle (TCA cycle, Krebs cycle)
care_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT85_2895
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LT85_2895
Enzymes [BR:
care01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LT85_2895
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AIY42053
UniProt:
A0A0A1FBC4
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Position
complement(3237283..3240138)
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AA seq
951 aa
AA seq
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MMQQYRSNSYLFGGNAPYIEELYESYLDNPGSVADNWRAYFDAMQHVPAVDGSDKPDVGH
ASVIASFAERAKQGPIRTISASADAEMGFKRVAATQLIAAYRYLGSRWANLDPLQRQERS
ALPELEPSFYGFTDADMDIVFNISNTYFGPETATLRDLLNALRETYCRSIGTEYMYISDP
TEKRWMQERLESTRSAPVFTAEKKKHILDRLTAAEGLERYLHTRYVGQKRFSLEGGESFI
VSLDETIQRAGEKGVQEIVIGMAHRGRLNVLVNTLGKMPQELFAEFEGKHADDLPAGDVK
YHQGFSSDITSPGGPVHLSLAFNPSHLEIVNPVVEGSVKARMERRGDTDGSQVLPILVHG
DAAFAGQGVVMETLNLAQTRGYGTGGTVHIVINNQIGFTTSDPRDSRSTLYCSDVVKMIE
APVLHVNGDDPEAVVYATQIALDYRMEFKKDIVVDIICFRKLGHNEQDTPALTQPLMYKK
IGQHPGTRKLYADKLAAQGAIATDEGDAMVKAFRDAMDAGKHTVDPVISNFKSKYAVDWL
PFLNRKWTDAADTSVPVTELKRLAGRITTVPENFKVHALVEKVLNDRAAMGRGELNLDWG
MGEHLAYASLVSSGYAIRLTGQDAGRGTFVHRHAVLHDQNRERWDAGSYIPLQNISEQQA
PFKVIDSVLSEEAVLGFEYGYSTAEPNTLTIWEAQFGDFANGAQVVIDQFISSGEVKWGR
ASGLVMMLPHGYEGQGPEHSSARLERYLQLCADNNMQVVQPTTAAQIFHLLRRQMIRLFR
KPLVIMTPKSLLRNKDAGSPLSDFSKGSFQTVIGEVDDKIDPKKVKRIVACSGKVYYDLV
NARKERGQTDVAIIRLEQLYPFPHKAFAAELKQFPHFNELVWAQDEPQNQGAWLQIQHNI
FENLEDGQKLAYAGRPASASPAVGYYDKHYAQQKALLDTAFSKLKGFVLTK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaataccgctctaattcatatctcttcggaggtaatgcaccgtacattgaa
gagctgtacgagtcatacctcgacaatcccggttcagttgccgataactggcgcgcatat
tttgacgccatgcaacacgtacctgccgtcgacggctcagacaagcctgacgtaggccac
gcttccgtcatcgcctcattcgccgagcgcgccaagcaaggtccaatccgtactatctcc
gcttcagccgatgctgaaatgggtttcaagcgcgttgctgcaacgcaattaattgctgcc
tatcgttaccttggctcccgctgggccaatctggacccgctgcaacgccaggaacgttcc
gcactgccggaactggaaccaagcttctacggtttcaccgatgccgacatggacatcgtg
ttcaacatcagcaacacctacttcggtccggaaactgcaaccttgcgcgatctgctcaat
gcactgcgcgagacatattgccgttcgatcggtactgaatacatgtacatcagcgatccg
accgaaaagcgttggatgcaagagcgcctggagtctactcgctcggcgccggtattcacc
gcagaaaagaagaaacacatccttgaccgcctgaccgcggctgaaggcctggagcgctac
ctgcatacccgttatgtcggccagaagcgtttctccctggaaggtggcgaaagcttcatc
gtctccctggatgaaaccatccagcgcgccggtgaaaagggtgtccaggaaatcgttatc
ggcatggcccaccgcggccgcctgaacgtgctggtcaacaccctgggcaagatgccgcaa
gagctgttcgcagaattcgaaggcaagcatgccgacgacctgccagccggcgacgtcaag
taccatcaaggcttctcttcagacatcactagcccaggcggtccggtgcatctgtcgctg
gcgttcaacccgtcacatctggaaatcgtcaacccggtagttgagggttcggtcaaggcc
cgtatggaacgccgcggcgataccgacggttcgcaagtgctgccgatcctggtgcacggc
gatgcggctttcgctggccagggcgttgtgatggaaaccctgaatctggcgcaaacgcgt
ggttacggcacaggcggtaccgtgcatatcgtgatcaacaaccagatcggcttcaccact
tccgatccgcgcgattcccgttcgaccctgtactgctcggacgtcgtcaagatgatcgaa
gcaccggttctgcacgtcaacggcgatgatccggaagcggtggtgtacgctacccagatc
gcactcgattaccgcatggaattcaagaaggatatcgtggtcgatatcatctgtttccgc
aagctgggccacaacgaacaagatacgccagcgctgacgcagccgctgatgtacaagaaa
atcggccagcatccaggcacccgcaagctgtacgcggacaagctggctgcccaaggcgcc
attgcaactgacgaaggcgacgcgatggtcaaggcttttcgcgatgcgatggacgctggc
aagcacactgttgatcctgtcatctccaacttcaagagtaaatatgccgtcgactggctg
ccattcctgaaccgcaaatggactgacgccgctgatacatcggtgcctgtgactgagctg
aagcgcctggccggccgtatcacaaccgtgccggaaaatttcaaggtccacgcactggtt
gaaaaagtactgaacgaccgcgcagcaatgggccgtggcgaactcaacctcgactggggt
atgggcgagcatctggcctacgcgtcgctggtatcttccggttatgcaatccgtctgacc
ggccaggatgcaggccgcggcaccttcgttcaccgtcacgcggtattgcatgaccaaaac
cgtgagcgttgggatgcaggcagctatattcctctgcaaaatatctccgaacagcaagcg
ccgttcaaggtcatcgattcggtactgtcggaagaagctgtgctcggtttcgaatacggt
tattccacagcagaaccaaacacgctgactatctgggaagcgcaattcggcgacttcgcc
aacggcgcgcaagtcgtgatcgaccagttcatcagctccggcgaagtgaagtggggccgt
gcttctggcctggtcatgatgctgccgcacggttacgaaggccaaggcccggaacactcg
tcggcccgcctggaacgttatttgcaactgtgcgcagacaacaacatgcaagtggtgcag
ccgactaccgcagcgcagattttccatctgctgcgccgccagatgatccgcctgttccgc
aagccgctggtgatcatgacgccgaagtcgctgttgcgtaacaaggacgccggttcgccg
ttgtctgatttcagcaagggcagcttccagaccgtgatcggcgaagtcgatgacaagatc
gaccctaagaaggtcaagcgcatcgtcgcttgctcgggcaaggtttactacgatctggtc
aatgcacgtaaagagcgtggtcagaccgatgtcgcaattatccgcctggaacaactgtat
ccgttcccgcacaaggcattcgctgccgagttgaagcagttcccgcacttcaacgagctg
gtatgggctcaggatgagccgcaaaaccagggcgcgtggttgcagatccagcacaatatt
tttgaaaacctggaagatggtcaaaagcttgcgtatgcaggccgtccagccagcgcgtcg
ccagcggtcggttactacgacaagcactatgcgcagcaaaaagcattgctggatacggca
ttttccaagctcaaaggttttgttcttaccaaataa
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