Collimonas arenae: LT85_4346
Help
Entry
LT85_4346 CDS
T03512
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] alpha chain
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
care
Collimonas arenae
Pathway
care00020
Citrate cycle (TCA cycle)
care00640
Propanoate metabolism
care00660
C5-Branched dibasic acid metabolism
care01100
Metabolic pathways
care01110
Biosynthesis of secondary metabolites
care01120
Microbial metabolism in diverse environments
care01200
Carbon metabolism
Module
care_M00009
Citrate cycle (TCA cycle, Krebs cycle)
care_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT85_4346
00640 Propanoate metabolism
LT85_4346
00660 C5-Branched dibasic acid metabolism
LT85_4346
Enzymes [BR:
care01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LT85_4346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
AIY43504
UniProt:
A0A0A1FIN5
LinkDB
All DBs
Position
complement(4884952..4885833)
Genome browser
AA seq
293 aa
AA seq
DB search
MSILINKDTKVVTQGITGKTGQFHTRGCRDYANGKNAFVAGVNPKKAGEDFEGIPIFANV
SEAKAATGANVSVIYVPPAGAAAAIWEAVEAELDLAICITEGIPVRDMLALKDRMAKAGS
KTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLGQSSA
VGIGGDPINGLKHIDIMKMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDNMKKPVVSFIA
GVTAPPGKRMGHAGALISGGADTAQAKLDIMEACGITTTKNPSEMARLLKAML
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcctgatcaacaaagacactaaagtcgtcacccaaggcatcaccggcaagacc
ggccaattccacacccgcggctgccgcgattacgcaaacggcaagaacgcttttgtcgcc
ggcgtgaatccgaaaaaagccggtgaggatttcgaaggcattccgattttcgctaacgtt
tccgaagccaaggccgccaccggcgccaacgtctcggtaatctatgttccgccagcaggc
gcagcagcagcaatctgggaagccgtcgaagccgaactcgacctggccatctgcatcacc
gaaggcattccagtacgcgacatgctggcgttgaaagaccgcatggcaaaagccggcagc
aagactttgctgctaggccctaactgcccaggtctgatcacaccagacgaaatcaagatc
ggcatcatgccgggccatatccacaagaaaggccgtatcggcgtggtatcccgctccggt
accctgacttatgaagcagtcggtcagttgaccgcactgggcctgggccagtcgtctgca
gtcggtatcggcggcgatccgatcaacggcttaaagcacatcgacatcatgaagatgttc
aacgatgatcctgacaccgatgcagtcatcatgatcggcgaaatcggcggtccggacgaa
gccaatgctgcttactggatcaaggacaacatgaagaagccggtggtcagcttcatcgct
ggcgttacagctcctccaggcaagcgcatgggccacgccggtgcgttgatttccggtggc
gccgacactgcgcaagccaagctggacatcatggaagcatgcggcatcaccaccaccaag
aatccatcggaaatggcgcgtctgttgaaagcaatgctgtaa
DBGET
integrated database retrieval system
