KEGG   Cryobacterium arcticum: PA27867_1555Help
Entry
PA27867_1555      CDS       T04435                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cart  Cryobacterium arcticum
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cart00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    PA27867_1555
Enzymes [BR:cart01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PA27867_1555
DNA repair and recombination proteins [BR:cart03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PA27867_1555
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1:complement(1757087..1759726)
Genome map
AA seq 879 aa AA seqDB search
MAHGAEVAGHNPADTAGAHREVVTVGGRRVTLTNLEKVMYPATGTTKADVLGYYADVADA
LIRHTRDRPATRKRWVHGVGTAAEPGQVFFQKNLGDGTPEWVERRELEHKERSTVYPLVN
DLATLTWLAQIGTLEIHVPQWRFDARGAQSPPDRLVLDLDPGDGVGLAECAEVARWARAL
LLDMGLDARPVTSGSKGIHLYAALDGRHSSEQVSQVARELARALEADHPDEVLSAMTRSM
RPGKVFVDWSQNSAAKTTIAPYSLRGLLRPFVAAPRTWRELEAPGLEQLDYHQVLKRLSR
APDPLAAVADAADAHAGAAAGPVPASGATAGPDEDRLHTYRSKRDARRTPEPMPKSTPDA
SPAAGGAAFVVQEHHARALHFDLRLEHEGVLASWALPKGVPTDPTHNHLAVQTEDHPLEY
LAFEGDIPAGEYGAGTMSIWDRGEYSAEKWRDDEIIVTLHGSPGGPLAAGGDESGRTFAL
IRTGGAGSRNWLIHLMKSRRPPAAETSGAGQGGSAQEARVTSAPLRAAAYSPMLARPGTL
RDLSAETDWAYEMKWDGIRMIATVGAGADGAVRFLTRNGNDVTAAFPELVDDLRAALAGR
AAVLDGEVVALDRHNRPDFSLLQTRLGLTDPTDVRRARQGAPVHYFVFDLLEHDWRPLVE
LPYAERRQALERWVQGTGTVQVPPAFDDQDAATVLATSSRLGLEGIIAKDTRSGYLAGRR
ADRWVKIKHVTSQEVVIGGWRPGAGHRSSTLGSLLVGIPAPAGPETAPGAPRRLLYAGRV
GTGFRDRDLTALRRRLDELSTADTPFEDVPAADAADAVWVQPALVGEVDFSAWTPAGRLR
HPSWRGLRADKDPADVVREEAVREEAALGAAVAEAGDSR
NT seq 2640 nt NT seq  +upstreamnt  +downstreamnt
atggcacatggcgcggaggttgcgggacacaacccggcggacaccgccggggcgcaccgc
gaggtcgtgacggtgggcggccgccgggtcaccctcaccaatctcgagaaggtgatgtat
ccggccaccggcacgaccaaggccgatgtcctcggctattacgcggacgtggcggatgcg
ctcatccggcacacgcgggaccggccggccacgcgcaagcgctgggtgcacggtgtgggc
accgccgccgaacccggccaggtgttcttccagaagaatctgggcgacggcacacccgag
tgggtggagcgccgggagctggagcacaaggagcgcagcaccgtgtacccgctcgtgaac
gacctggccaccctcacctggctggcgcagatcggcaccctcgagatccatgttccgcag
tggcggttcgatgcccggggcgcgcagagccctccggaccggttggtgctcgacctcgac
cccggcgacggggtgggtctggcggaatgcgccgaggtggcgcgctgggctcgggcgctg
ctgctggacatgggcctggacgcccggcccgtgacgagcgggagcaagggcatccacctc
tatgcggcgttggacggccggcacagttcggagcaggtgagccaggtggccagggagctg
gcccgggcgctggaagccgaccatccggacgaggtgctcagcgcgatgacccggtcgatg
cgaccgggcaaggtcttcgtggactggagccagaacagcgcggccaagaccaccatcgcg
ccgtacagcctgcgcggcctgctgcggccgttcgtggcggctccgcgcacctggcgcgag
ctggaggcgccggggctggagcagttggactaccaccaggtgctcaaacggctctcccgg
gcgccggacccgctggcggccgtggccgacgccgccgacgcgcatgccggcgccgcggcg
ggcccggtgccggcttccggggccaccgctgggccggacgaggaccgcctgcacacctac
cggagcaagcgggacgcccggcgcacgcccgaacccatgccgaagagcacgcctgacgcc
tccccggccgccggcggagccgccttcgtggtccaggaacaccatgccagggccctgcac
ttcgacctgcgcctggagcacgagggcgtgttggcctcctgggcgctgcccaagggggtg
cccaccgaccccacccacaaccacctggccgtgcagaccgaggaccacccgctcgagtac
ctcgcgttcgagggtgacattccggccggggaatacggtgcagggacgatgtcgatctgg
gaccggggcgaatacagcgcggagaagtggcgggacgacgagatcatcgtgaccctgcac
ggcagtcccggcggcccgctcgcggcgggtggggacgagtcggggcgcaccttcgccctc
atccgcaccgggggcgccggctcccgcaattggttgatccacctcatgaagtcccggcgc
ccgccggccgcggagacatccggcgccggccagggcggctctgcccaggaggcccgcgtc
accagcgccccacttcgcgcagcggcctactcccccatgctcgcccggccgggcaccctg
cgcgacctctcggccgagaccgactgggcgtacgagatgaaatgggacggcatccgcatg
atcgccaccgtcggagcgggcgccgacggagccgtgcgtttcctcacccgcaacggcaac
gacgtcacggccgcgttccccgaactcgtcgacgacctgcgcgcggccctggccggccgg
gccgccgtgctggacggcgaggtggtcgcgctggaccgtcacaaccggcccgacttctcc
ctgttgcagacccggctcgggctcaccgacccgaccgacgtgcgccgggcccgccagggc
gcaccggtgcactacttcgtcttcgacctcctcgagcacgactggcgccccctcgtcgag
ctgccctatgccgagcgccggcaggcccttgaacggtgggtgcagggaacgggcaccgtt
caggtgccgccggcgttcgacgaccaggatgcggccacggtgctggctaccagctcccgg
ctgggcctggagggcatcatcgccaaggacacccgcagcggttacctcgccggccgccgc
gccgaccgctgggtgaagatcaagcacgtgaccagccaggaggtcgtcatcggcggctgg
cgtcccggagccggtcatcgctcctcgaccctgggctcgctcctggtggggatacccgcg
ccggccgggcccgaaactgccccgggcgcaccccggcggctgctctacgcggggcgcgtc
ggcacgggcttccgcgaccgggacctcaccgctctccgacggcgcctcgacgagctttcg
acggcggacaccccgttcgaggacgtgccggcggccgacgcggctgacgccgtctgggtg
cagccggccctggtcggcgaggtggacttctcggcctggacgccggccggccggctgcgg
caccccagctggcgggggctgcgggccgacaaggaccccgccgatgtggtgcgggaagaa
gccgtgcgggaagaagcagcgctgggggccgccgtggccgaggcgggtgattcccgatga

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