Cygnus atratus (black swan): 118243103
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Entry
118243103 CDS
T09349
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04810
Regulation of actin cytoskeleton
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118243103 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118243103 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118243103 (FN1)
04810 Regulation of actin cytoskeleton
118243103 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118243103 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118243103 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118243103 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118243103 (FN1)
Membrane trafficking [BR:
cata04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
118243103 (FN1)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
118243103 (FN1)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118243103 (FN1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
118243103 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
NDNF
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
118243103
NCBI-ProteinID:
XP_035392728
EnsemblRapid:
ENSACYG00000002204
LinkDB
All DBs
Position
6:complement(8870848..8924532)
Genome browser
AA seq
2481 aa
AA seq
DB search
MPCRNGWRLALLALCLGVAAGGGAGQRRGGKSRRQAQTPTVPQASPAQGKQTCFDNGRYY
QINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTKTS
YRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLHTTSTGSGSPSFTNVQTALYQPQ
PQQPQPQPYGQCITDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYGGNSD
GEACVLPFTYNGRTFYSCTTEGRTDGHLWCSTTSNFEQDRRYSFCTEQNVLVQTRGGNSN
GALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTNDGV
MYRVGDQWDKQHDLGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKRHD
EGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGIRYQCYCYGRGIGE
WHCQPLQAYAGATGPVQVIITESTNQPNSHPIQWNAPKTSHISKYILRWRPKNSGKHWKE
ATIPGHLNSYTISGLKPGVIYEGQLISVQQHGPKEVTRFDFTTTSTTAVTSNTVSGETTL
LPPMVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNI
PDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHTVESVDDTSIVISWSRPQAP
ITGYRIIYTPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPVFIQQE
TTGVPRTDEVPSPRDLQFVEVSDVKVTIMWTPPQSQVSGYRVEAIPVNRPGQHGQRLPIT
RSSFAEVVDLIPGTTYLFKIFAVSHGRESKPLTGEQTTKLDAPTNLRFLNTTEHSVLVLW
MRPRAVITGYRLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKEDLQSAR
ETGVFTTYQPVGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVISDSGS
IVISGLTPGVEYTYSLTVLMDGQERETPIIRRVITPLSPPTNLRLEPNPDTGILIVSWDR
STTPGISGYRVTTAPTDGQQGSTLEEVVGADQTTCTFENLNPGVEYNVSVYSVKDEQESI
PISKTITQEVPQLTDLSFVDITDSSIGLRWTPLNASTIIGYRITVVAAGESVPIFEDFVD
SSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTMRVT
WTAPTSIVLSSFLVRYSPVKKDEDVAELTISPSDNMVILTNLLPGTEYLVRVYSVSEQHE
SAPLSGIQKTGLDSPTGLDFSDITANSFTVHWIAPRAAITGYRIRYHPEHGPSKPKEDRV
PPSRNSITLTSLLPGTEYVVSIIAINGREESVPLVGQQTTVSDVPRDLEVTPTSPTSLVI
SWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTVSTATITGLKPGVDYTITVYAVTGRGD
SPASSKPVTVTYKTEIDTPSQMQVTDVQDNSISIRWLPSTSPVTGYRVTAVPKKGHGPTK
TKNVPPDQTQVTIEGLQPTVEYMVSVYAQNQNGESLPLVETAVTNIDRPKGLTFTEVDVD
SIKIAWESPQGQVTRYRVTYSSPEDGIHELLPAPGGEEDTAELHGLRPGSEYTINIVAIY
DDMESLPLTGTQSTAIPPPTNLQFTQVTPTSLTVNWNAPNVRLTGYRVRVNPKEKTGPMK
EINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRARVTDAT
ETTITITWRTKTETITGFQIDAIPASGQNPIQRTISPDVRAYTITGLQPGTDYKIYLYTL
NENARSSPVVIDASTAIDAPSNLRFLTTTSNSLLATWQPPRAKITGYIIRYEKPGSPPKE
LLPRPRPSTTEATITGLEPGTEYIIYIIAVKNNQKSEPLIGRKRTDELPTLITRPHPNQP
DILDVPSIDEGTPYLTNNRYDNGNGIQLPGTSGHPQTIGHQGQQVFFEEHGYRRPVPTTA
TPLRPGSRRQPPNVDEAIEIPGYQVPIVVEPSYPHSRGPRRNDTTGQEALSQTTISWRPL
LESTEYIISCQPVSQDEDTLQFRVPGTSSSATLTGLTRGATYNIIVEALKDHRRQKVLEE
VVTVGNTVSEGLNQPADDTCYDTFTGSFYSIGEEWERLSETGFKLWCQCLGFGSGHFRCD
SSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCEPHETTCYDDGKMYQVGE
QWQKEYFGAICSCTCYGGQQGWRCDNCRRPSVEVAPEGSAGHTYTQFTQRYHQATNTNVN
CPIECFMPLDVQADTQHPRGK
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgccgaaacgggtggcggctggcgctgctcgccctctgcctgggggtggcagcg
ggagggggcgcagggcagcggcggggagggaagagccggaggcaggcgcagacccccacc
gtgccccaagccagcccagcgcagggcaagcagacctgttttgacaatggaaggtactat
cagataaaccagcagtgggagcgcatctacctggggaacacactggtctgtacctgctat
ggcgggagcagagggtttaactgcgaaagtaagcctgaacctgaagagacttgctttgat
aaatacactggatccacttaccgagtaggggagacatatgagcgccccaaggactccatg
atctgggactgtacttgcattggagctggacgtgggagaatcagctgcaccattgccaat
cgctgtcatgagggcggccagtcctacaagattggtgatacctggcgtcgcccccacgag
acgggtggctacatgctggagtgcgtgtgcctgggcaacggcaagggcgagtggacctgc
aagcctgtggctgagcgatgctacgacaatacggccgggacatcctacgtggtgggtgag
acctgggagaagccctaccaaggatggatgatggtggactgcacctgccttggggagggc
agcggccgcatcacctgcacctccagaaacaggtgcaatgaccaagacaccaagacttcc
tacagaatcggagacacctggagcaagaaggataaccgtggaaacttgcttcagtgcatc
tgtactggtaatggcagaggtgaatggaagtgtgaaagacacacatccctgcatacaact
agcactggttctggctctcctagcttcacaaacgtacagactgcgttgtaccagcctcag
cctcaacagccccagcctcagccatatggccagtgcataactgataacggagtggtgtac
tcagtgggtatgcagtggctcaagacgcagggcagccagcaaatgctttgtacctgcctg
ggcaacggagtcagctgccaagaaatagctgtgacccaaacatatggtggcaattccgat
ggagaagcctgtgttctgcctttcacctacaatggaaggactttctactcctgcacaact
gaaggccgcacagatggacacctctggtgcagcaccacttccaactttgagcaggacagg
agatactccttctgtactgagcagaatgttttggtccagactcgtggtggcaattccaat
ggtgctctgtgccacttccccttcctgtacaacaaccgcaactacactgactgtacttct
gagggacggagagacaacatgaagtggtgtggaaccactgagaactatgatgctgaccag
aaatttggtttctgcccaatggctgcccatgaagaaatctgcactaccaatgatggtgtc
atgtaccgtgttggggaccagtgggacaaacagcacgacttgggccacatgatgagatgt
acctgtgtaggcaatggccgtggagagtggacttgcattgcgtactcccagctcagagac
cagtgcattgtggacggtatcacctatgatgtgaaccagacgttccacaagcgtcacgat
gaggggcacatgctgaactgcacgtgctttggccagggtcgggggagatggaaatgtgat
cctgttgatcagtgccaggattcagaaacccgtaccttttaccaaatcggagattcgtgg
gagaagtacgtccatggcatcagataccagtgctattgttatggtcgtggtattggagag
tggcattgccagcccctgcaggcctatgctggggcaactggtcctgttcaggtgattatt
acagagagtacaaatcagccaaactcccatcctatccaatggaatgctccaaaaacatct
cacatcagcaagtacatcctgcgctggagaccgaaaaactctggaaagcactggaaggaa
gccaccattcctggtcacctgaactcctacaccatctcaggcctgaagcctggtgtgatt
tatgaaggacagctcatcagtgttcagcagcatggccccaaggaagtcacgcgctttgat
tttaccacaactagtaccacagcggtgacaagcaacactgtttcaggagagacaactctt
cttcctccaatggttgctacttccgagtcagtcactgaaatcacagccagcagctttgtt
gtctcctgggtttctgcatctgacacagtttctggattccgcgttgagtatgagctgagc
gaggagggagatgagccacagtatcttgatcttccaagtacagccacttctgtcaacatc
cccgacttgcttcccggtcgcaagtatattgttaacgtctatcagatctctgaagaagga
gaacagaatctgatcctgtctacttcacagactacagctcctgatgcacctcctgatcac
accgtggaaagcgtagatgacacatcaattgtcattagctggagcagaccacaggctcca
atcacaggctacagaattatctacacgccctctgtggaaggcagcagcacggagcttaac
ctgcccgacaccgctacttctgtaaccctcagtgacttgatgccaggtgttcagtacaac
atcagcatctatgcagtggaagaaaatcaggagagtactcctgtcttcatccaacaggaa
accacaggcgtcccacgcacagacgaagttccttcaccccgagatctgcagttcgtggaa
gtttctgatgtcaaggtcaccatcatgtggacgccaccacagagccaagtgtctggctat
cgggtggaagcaatccccgtcaatcgccctggccagcatggccagaggctgcccattacc
agaagctcttttgctgaagttgttgacctgatcccaggaacaacctatctctttaagatc
tttgccgtgagccacggcagggagagcaaacctttgactggagagcaaaccaccaaactt
gatgccccaaccaacctgagattcctcaataccacggagcactcggtgctagtgttgtgg
atgcggccccgtgctgtgatcacaggataccggctgactgcaggtcccacgagaggaggc
cagccacggacctacaacgtgggaccttctgccacgaagtacctcctcaggaacctgcag
cccggcactgagtacacagtgtacctcgtggcagttaaagaagacttgcaaagcgcaaga
gagactggagtcttcacgacttatcagcctgttggctctgttcctcctttcaacacagaa
gtgactgagacttctattgtcatcacctggacgcctgccccaaggattggtttcaagctg
ggtgtgcgcccaagccaaggtggagaggctccccgggaggtcatctctgattctggcagc
atcgtgatatctggcctgaccccaggagtggagtacacctacagcctcaccgtcctgatg
gacggccaggagagagagactcccatcatcaggagagtgattacacccctgtctccacca
accaacctgcgcctggagcccaatcccgatactggaatcctgatagtctcctgggacaga
agcacaactccaggaattagtggctaccgagtgaccactgctcctaccgacgggcagcag
ggctccaccttggaggaagtggtaggtgcagatcagactacctgcacctttgaaaacctc
aacccgggtgtggagtacaacgtcagtgtttactcagtcaaggacgagcaggagagcatc
cccatctccaaaaccatcacacaagaggtgccccaactcactgacctaagctttgttgac
ataactgactcaagcatcggcctgaggtggaccccgttaaatgcctccaccattattggg
taccgcatcacagtagttgcggcaggagaaagtgtccctatttttgaagattttgtggac
tcctcagtaggatactacacagtcacaggcttggagccgggcattgattacgacatcagt
gtaatcacactcattaatggcggagagagcgcccctaccactctgacacagcaaacggct
gtgcctcctcccactgatctccgcttcactaatgtggggcctgatactatgagagtgaca
tggactgcaccaacttccatcgtgctgagcagcttcttggtgcgctactcacctgtgaag
aaggacgaagatgttgcagagctgacgatttcaccctctgacaacatggtgatcttaaca
aatctgctccctggtactgaatatcttgtgagagtctacagtgtttctgagcaacatgag
agtgcacctttgtccggaatccagaaaacaggtctcgattcccccactggccttgacttc
tcggatataactgccaactctttcaccgtccactggattgctcctcgtgccgccatcacc
ggctacagaatccggtatcacccagagcatggtcccagcaagcccaaggaggaccgcgtg
cccccctcacgaaactccatcactcttaccagcctgctcccagggactgagtatgtggtc
agcatcattgccatcaacggcagggaggagagcgtgcccttggtcggccagcaaacaaca
gtgtctgacgttccaagggacctggaagttacccccaccagcccaaccagccttgtgatc
tcctgggatgctcctgcagtgacagtcagatactaccggatcacttatggtgaaacaggt
ggaagcagccctgtacaggagtttacagtgcctggcaccgtgtccactgctaccatcact
ggcctcaaacctggcgtggactacactatcaccgtgtatgctgtaactggtcgtggagac
agccctgccagcagcaagccagttactgtcacctacaaaacagaaatagacacaccatcc
cagatgcaagttaccgatgtccaggacaacagtatcagcatcagatggctcccttcaaca
tccccagtcacaggatatcgggtgacagctgtccccaagaaaggccatggacccacaaaa
acgaaaaatgtccctccagatcaaacacaagtcactattgaaggtctgcagcccacagtt
gagtacatggtcagtgtctacgctcagaatcagaacggagagagcctccccttggtggag
acagctgtcaccaacattgaccgccctaaaggactaacattcactgaggtggatgttgat
tccatcaaaattgcttgggaaagcccgcaggggcaagtcaccaggtacagggtgacctac
tcaagccctgaggatggaatccatgagctattgccggccccaggtggcgaagaagacact
gctgagctgcatggcctcaggccaggttctgagtacactatcaatatcgttgccatatac
gatgacatggagagcctgcccctcactgggacccagtccacagcaatcccacctccaaca
aacctgcagtttactcaggtaactcccaccagtcttactgtcaactggaatgcaccaaat
gttcgtctaactggctacagagtcagagtgaaccccaaagagaagactggtcctatgaaa
gaaatcaacctttctccggacagtacatctgccgttgtgtctggattaatggtggcaacc
aagtatgaagtgagtgtgtatgcactgaaggactctctgaccagccgacctgcccagggg
gtggtgaccactcttgaaaatgttagtccccctcgcagggcccgtgtgacagatgccaca
gagacaaccatcaccattacctggagaaccaagaccgagacaatcactggcttccaaatc
gatgccatcccagcaagtggccagaaccccatccagaggaccatcagccctgatgtcagg
gcctacactatcactggcttgcaacctggcactgactacaagatctacctttacactctg
aacgagaatgcacgcagctccccggtagtgattgatgcgtccactgctatcgatgctcct
tccaacctgcgcttccttacaaccacaagcaactccctcctggctacctggcagcctccc
cgagccaagatcacaggctatatcattaggtacgagaaacctggctcaccacccaaggag
cttctgcctcgccctcggcccagcaccaccgaggctactattacaggtttggaaccagga
actgaatacatcatctacatcattgctgtgaagaacaatcaaaagagtgaaccgctgatt
ggcagaaaaaggacagatgagcttcccacgttgattaccagaccacaccccaaccagccc
gacattctcgacgtaccttccattgacgaggggaccccctacctcacaaacaataggtat
gacaatggaaatggtatccaacttccaggcacttcagggcacccacagacaataggacac
cagggacagcaagtcttctttgaagagcacggctacaggcggcctgtacccaccacagca
actccgctcaggccggggtcgagacggcagccgccgaatgtggacgaagccatcgaaatc
cccgggtaccaagtgcctatcgtagtcgaaccttcctaccctcactcccgtgggcccagg
cgcaatgacaccacggggcaggaggctctttctcagaccaccatctcttggaggccgttg
ctggagagcactgagtacatcatctcatgtcagcccgtcagccaggacgaggacactttg
cagttcagggtccctggcacttcctccagtgctacgctcaccggccttacgagaggggcc
acctacaacatcatagtggaagccctgaaagatcaccggagacaaaaggtgctggaggag
gtagtcacggttggcaatactgtgtctgaaggactcaaccagccagctgacgacacctgc
tacgatactttcactggctccttctattccattggcgaggagtgggagcggttatctgaa
actggctttaaactctggtgccagtgcttaggctttggcagtggtcatttcagatgtgat
tcttctaagtggtgccacgataacggtgtgaactacaagattggggagaagtgggaccgg
cagggggagaatggccagatgatgagctgcacctgccttggaaatgggaaaggagaattc
aagtgtgaacctcatgagaccacctgctacgatgatgggaaaatgtaccaagttggagag
cagtggcagaaggagtactttggggccatctgttcctgcacttgttatggaggacagcag
ggctggcgttgtgacaactgccgccggcccagcgtggaggtggcccccgaaggctcagct
ggccatacctacacacagttcacacagagataccaccaggccacaaacaccaacgtcaac
tgccccattgagtgtttcatgcccctagatgtacaggcagacacacaacatccacgggga
aagtaa
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integrated database retrieval system
