Cygnus atratus (black swan): 118244787
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Entry
118244787 CDS
T09349
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03420
Nucleotide excision repair
cata04115
p53 signaling pathway
cata04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118244787 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
118244787 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
118244787 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118244787 (DDB2)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118244787 (DDB2)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
118244787 (DDB2)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
118244787 (DDB2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
118244787
NCBI-ProteinID:
XP_035395875
EnsemblRapid:
ENSACYG00000015024
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All DBs
Position
5:33988155..34004814
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AA seq
545 aa
AA seq
DB search
MKAPGRGRLPPAVLGRAGAAEAGGAQWSDRMAPVNQPKDKKHERAHEHWSEETQSSGKRK
LDYKELENEPLAKKLFLRKTSKPLEKIGRSGGGSVTRNTGALFHQLERRCSIVHYVYQNM
LGGSIRAQLRQCLQLPFLRSLTSYRLFRTASPFDRRVTCLEWHPTHPSTVAVGSKGGDII
LWDYEVLTKTCFIKGKGPGDSLGDIKFSPYEAVKLYVASGDGTLSLQDLEGRAVQVISRA
PDCGHELHNVCCWYCSVDVSASCRTVVTGDNLGNVVLLSTSGEEIWKLKLHKKKVTHVEF
NSRCEWLLATASVDQTVKIWDLRNIKDKTNFLHVLPHDKPVNAAYFSPTDGAKLLSTDQR
NEIRVYSCSDWTKPQHLIPHPHRQFQHLTPIKATWHPRYDLIVAGRYPDPKFPGYTVNEL
RTVDIFDGNTGEMVCQLHDPNASGIISLNKFNPMGDTLASGMGFNILIWSREEMVAKKQE
HLLKAMTEQGIGSRSLSRRGGQRQANPGTSKLKAKLLSWDVEEMRTKSKDSKSQARKRKG
KDLEN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccggggaggggccggctgccgcccgccgtcctgggccgcgccggggctgcg
gaggccggcggagcgcagtggtcagacagaatggctccagtaaatcagccaaaggacaag
aagcatgagagggcacatgagcattggtcagaagagacacaatcgtctgggaaaaggaaa
ctggactacaaggaactagagaacgaaccactagcaaagaaattgtttctgagaaaaaca
tccaaacccctagaaaaaatcggtcggagtggaggtgggtctgtgacgagaaacaccgga
gcccttttccatcagctggagcggcggtgcagcattgttcattatgtctaccagaacatg
ctgggaggctccatccgggcacagctcaggcagtgtctccagctgccctttctgcgttct
ctgacctcctaccgcctcttccgaacagcaagtccctttgacaggagagtgacatgcctg
gagtggcatccaacacacccaagtactgtagctgttggttccaaaggtggagacatcatt
ctgtgggactacgaagtacttactaaaacctgctttataaaagggaaagggccgggagat
tctcttggagacatcaagttcagtccttatgaggcagtgaagctttatgtggcatcaggg
gatggcaccctaagcctgcaggaccttgagggcagagcggtgcaggtgatctcccgtgcc
ccggactgtggccatgagctccataatgtttgttgctggtactgcagcgttgatgtttct
gcaagctgccgcactgtggtgacaggcgataatttgggcaacgtggttctgctcagcact
tctggtgaagagatttggaagctgaaattgcacaagaagaaagtaactcacgtggagttt
aactctcgatgtgagtggctgttggccacagcatctgtggatcagacagtcaaaatctgg
gacctcagaaacatcaaagacaaaactaattttcttcatgtgcttcctcatgacaaacct
gtcaatgcagcttacttcagcccaacagatggtgccaagctgctgagtacagaccagcgc
aatgaaatcagggtttactcgtgttcagactggaccaagccacagcatctgatcccacac
ccacatcggcagttccagcacctcacacctattaaggcgacatggcatcctcgctacgac
ctcattgtagcgggtcgctacccagacccgaagttccccgggtacacagtgaatgagcta
cggactgttgacatatttgatggaaacaccggggagatggtttgtcagctccatgaccca
aacgcatctggtatcatctcgctcaataaatttaaccctatgggagacacactggcctct
ggcatgggctttaatattctgatctggagccgggaggagatggtggcgaagaagcaagaa
catcttctgaaagccatgacagaacaggggatcggaagccggagtttgtccaggcgtgga
gggcagagacaggcaaacccagggacaagcaaactgaaagctaagttactgtcttgggat
gtggaagagatgagaacaaagagcaaagattctaaatcacaggcgaggaagagaaaaggg
aaggatctagaaaactga
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