Cygnus atratus (black swan): 118248320
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Entry
118248320 CDS
T09349
Symbol
RAB11FIP5
Name
(RefSeq) rab11 family-interacting protein 5
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118248320 (RAB11FIP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118248320 (RAB11FIP5)
Membrane trafficking [BR:
cata04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118248320 (RAB11FIP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
C2
Rtf2
Motif
Other DBs
NCBI-GeneID:
118248320
NCBI-ProteinID:
XP_035403028
LinkDB
All DBs
Position
4:75969859..76001856
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AA seq
1245 aa
AA seq
DB search
CGPAGCAARAAAAPGGSAPAAAGPGDVYAVLELGRQRHRTAVAERSGGSAEWQDGCALEL
PPGPGSPPVLTVTVLQRALLGADRFLGRCSLALPCPAPPGRAAELGWHKLHSKAGKKEKE
RGEVEVSVQFVRNNLTASMFDLSVKDKPRSPFGKLKDKVKGKKKYDLESASAIIPSSVGA
LDGEDDFDIGGKKSKIKGFLKSKLRKSSLTQSNTSLGSDSTISSASLGLAANAAEVTKSP
SRHSSLSTERSVRDFLPSPRLTHKRAFSDDVSQVSPVLEPKAIQSLKPKSDPVSRSSLCI
NGSHVYGDEPALQSPTPAPRSSAPLPVPGGPRRPEEGFGFAPLHPEPPEAPWGGFERTQQ
RDEPRFIPSPPSLVLQEELKVSTKAVTLSNHLGRARMEESGRSESKPTQAAAPLVVSAEA
RQEKQAEESRKEEKKPKGGFFHHGGTKSDAGGRGQGEKTGGSPAAGDERSRAGGWFASKE
PKESPQKPSFPPGPHASTEVAGSLCSSADCSPSASLRLTDPERDPPAPNVGVPVPETTPP
SHGDLPPPDEQAAAGPPPLSEWDATFDAFATSRLNPEPKKENLLASVAAEGMAFIDDPDA
ASPTDGSAEKGAKAFEKAEPQTGSEMPPALRSWTNFSGLDVGANLVSTTQEATVIEDVLS
PVSAGSGGRRRKSSTPMVWAPAFSSGNPGEKEASAARTAEKRGGEDRDSNEEETSSAGEN
GWMTIATETAPDPSESTQSIGQESAFGQRPFLSEGTFEAKSGPRAAACVLPRSKFPPETA
SETLPGGNVAAVPPRVLPEAAVRRFPAAPEPGRDPQGAGGQEETFDIRTSVYRLQASMRL
EAGEGRVRLSSDVRERHVVLSPWTGVRGEQEEDAAPGSDASASAPPPKPPRWFAAAGGGG
DGEEEVCDPKVRQQGGEERREGVEGLKGDVELPRRHRSGETAVPAPPSPTAPGAATAEAA
PEIPASGDAEGAATDSEPDVGAKAAELAKGDTSLGTDPSETSGEDVAEQFETCPSKLSPE
SWSQPALPPLSPGPAGGAELETATEQEQFPEELSVSGLTPSSRLDSGQPEAFWTALEEQE
AAGCPQRSHLGVEAALESAVGSAGRWLFSPWSSPHPVKPISAAVQEAPGEKKQQHKSSLT
AALSNGLEKLKTVTTGSIQPVAPSSHPEKADSKKLKDPTVLDQSAKYYHLTHDELIQLLL
QREKELSKKEEHIQELENYIDQLLVRIMEQSPTLLQIPLGEAKTK
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
tgcgggcccgcgggctgcgctgcaagggcggcggcggccccggggggcagcgccccggca
gcagcgggtcccggcgacgtgtacgccgtgctggagctgggccggcagcggcaccgcacg
gccgtggcggagcggagcggcggcagcgccgagtggcaggacggctgcgccctggagctg
ccccccgggcccggctccccgcccgtcctcaccgtcaccgtgctgcagcgggcgctgctc
ggggccgaccgcttcctggggcgctgcagcctggccctgccctgcccggccccccccggc
cgagccgcggagctggggtggcacaagctgcactccaaggctgggaagaaggagaaggag
cggggcgaggtcgaagtgagcgtccagttcgtgcgcaacaacctgacggccagcatgttc
gacctgtccgtgaaggacaagccgcgctcgcccttcggcaagctgaaggacaaggtgaag
ggcaagaagaaatacgacttggagtcggcctctgccatcatccccagcagcgtgggcgcc
ctcgacggggaggatgacttcgacatcgggggcaagaagtccaaaatcaagggcttcttg
aagagcaagctgcgcaagtcgtccctgacgcagtccaacacctcgctgggctccgacagc
accatctcttcggccagcctgggcctggctgcaaacgctgccgaggtaaccaaatccccc
agcagacacagcagcctgtccacggagcgctctgtgagggacttcttgccgtccccgagg
ctgacccacaagagagcgttcagcgacgacgtctcccaggtcagcccggtcctggagccg
aaagccatccaaagcctgaagccaaagagcgaccccgtgtcccggtcctccctctgcatc
aacggcagccacgtttacggcgacgagcctgcattgcagagccccacgcctgccccgcgg
agctccgcgccgctgcccgtgcccggcggccccaggaggccggaggagggcttcggcttc
gcccccctgcacccggagccccccgaagcaccctgggggggcttcgagaggacgcagcag
agagacgagcccaggttcatcccgtctcctcccagcttagtcctgcaggaagagctgaag
gtgtccaccaaagccgtgaccctcagcaaccacctgggcagagccaggatggaggagagc
ggccgctcggagagcaagcccacccaagctgcggcgcccttggtggtctccgcggaggcg
cggcaggagaagcaggcggaagaatcgaggaaggaagagaagaaacccaaaggcggcttc
ttccaccacgggggcaccaagagcgacgccgggggcagaggccagggagagaaaacggga
ggctcgcccgcggcaggcgacgagaggagcagggccggcggctggttcgcgtccaaggag
cccaaagagagcccccagaaacccagtttcccgcctgggccgcatgcttcaacagaggtc
gctgggagcttgtgttcctctgcggattgcagtccctctgcctccctcaggctcacggac
ccggagagggatcctccagccccaaacgttggcgtccctgtcccagaaaccactcccccg
tcgcacggagaccttcctcctccggacgagcaagccgccgccggtcctcctcccctctcg
gagtgggacgccaccttcgacgcctttgccaccagcaggctcaacccggagccgaagaag
gaaaacttgttggcttcggtggcggcggagggcatggccttcatcgacgatcccgacgcg
gcgagccccacggacggatcggccgagaagggggcgaaggctttcgaaaaggccgagccg
cagaccggcagcgaaatgcccccggctctacggtcttggacgaatttctccggtttggac
gtgggggcgaacttggtgagcacaacgcaggaagcgaccgtgatagaggacgtgctgagc
cccgtgtccgcggggtcgggggggaggaggaggaaaagcagcacgccgatggtttgggcg
cctgcgttctcgtcaggaaacccgggggagaaggaggcttcggcggcacgaactgctgaa
aaacgcggcggggaggacagggacagtaacgaggaggaaacctctagtgcgggggagaac
gggtggatgaccatcgccaccgaaaccgctcctgatccgtcggagagcacccaaagcata
ggccaggagagcgcgttcgggcagcggccgttcctcagcgaaggcaccttcgaagcgaaa
agcggtcctcgcgccgccgcttgcgtcctgcccagaagcaaattcccccccgagaccgcc
tccgaaacgctgccggggggcaacgtcgctgccgtgcccccgcgggtgctcccggaggcg
gcggtgagacggttccccgcggcccccgagccgggacgggacccccagggcgccggtggc
caggaggagacgttcgacatcaggacctcggtgtaccggctgcaggcgagcatgcggctg
gaggccggcgagggccgcgtgaggctcagctccgacgttcgcgagaggcacgtcgtcctc
tccccgtggacgggtgtgcgaggggagcaggaggaggacgcggcgcccggctcggatgcg
tcggcgtctgcgccgccccccaaacctccgaggtggttcgcggccgcgggtggcggaggg
gacggcgaggaggaggtgtgcgacccgaaggtgaggcagcagggcggcgaggagcggcgg
gaaggtgtggagggtctgaagggggacgtggagctgccgaggagacaccggagcggcgag
acggccgtcccagctcctccaagcccaactgcacccggggccgccaccgccgaagctgcg
cctgagatcccggcctctggggatgccgagggtgctgccacagactcagagcctgacgtg
ggggcaaaagctgcggagctggccaaaggggacacctctctggggacagacccgtcggag
acgagtggggaggatgtggccgagcagtttgagacttgcccgtcgaagctctccccggag
agctggagccagccagctttaccccctctatccccggggccggcaggcggtgctgagttg
gagacggccacggagcaggagcagttccccgaggagctgagtgtttcaggattaaccccg
tcttccaggctagactcgggccagcctgaagccttctggacggctctggaagagcaggag
gcagcgggctgtccccaaaggtcccatctcggggtggaagcagcgctggagagtgctgtg
ggctctgcagggcgctggctcttctctccttggagcagccctcacccggtgaagcccatc
agcgctgcggtgcaggaggcccccggcgagaagaagcagcagcacaagtccagcctgacg
gcggctctgagcaacggcctggagaagctgaagacggtcaccacgggcagcatccagccc
gtggccccgtcgtctcacccggagaaagcggactccaagaagttgaaggatcccaccgtg
ctggaccagtccgccaagtattaccacctgacccacgacgaactcatccagctcctgctg
cagagggagaaggagctgagcaagaaggaggagcacatccaggaactggagaattacatt
gaccagctgctggtgcgcatcatggagcagtcccccacgctcctccagatcccgctgggg
gaagccaagaccaagtaa
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