Cygnus atratus (black swan): 118248849
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Entry
118248849 CDS
T09349
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118248849 (CHD6)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118248849 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
Helicase_C
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
118248849
NCBI-ProteinID:
XP_050569973
EnsemblRapid:
ENSACYG00000013191
LinkDB
All DBs
Position
16:15337830..15426918
Genome browser
AA seq
2828 aa
AA seq
DB search
MELRDKSVGEHELVPFLASSVAVPRCCSGQGLLDMRESDVRLLGMKARSSRRCIQDSDRE
RQRSRNPPAAVWYLFDTECFPAATPSPVGLEEARRRLSSLKVLSRSPMSDASDTWECKAQ
DPFASSEEQDEVPHQVTAADVGSQRQCPEEEPNGAPQKRPSAQNGMQDTGGVGTGVKKKR
KKKDQGEQEGGEKAAVEVKPKRRREPKEPKEPKKAKEPKKQKEPKQREVAKKPRKPREPK
APKEPKDKKSGSEPASRARPKKSSKEQGPTPVEKKKKGKRKNEIPVDTLELDQDLLSPSV
QSPEECVESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAW
QAEEPPEDDANIIEKILASRMVQKEAHPGGLTFEMEEFYVKYRNFSYLHCKWATLEELEK
DPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLV
KWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHMVTYPEERPASESWQKLEKSREY
KNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLII
APLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVIT
TFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVE
ELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQ
ETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAE
EKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDIL
EDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDI
NRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSE
GKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTK
HYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDI
LTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSG
LSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRM
LYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYE
RYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDTAERGSMEKEESSGEKMEGLPKQ
EDIVAAGVGEAGEKRDEPSAAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPR
AEMLVPGNHGYWLQDEMFRRASEMDSVNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKI
FDWTQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERA
ARTLYRIELLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNR
TDYYIMNDPQLSFLDAYRNYAQHKRTGIPGSETLCCLYQTNSKLYSSPLYSQVDQTCESL
ENEAESQIKLESIDNTMSQSGGSPPDANCETFMSKVQDIISSNYDESSLPDSLMCMMYDE
KACNSEQSSLARDSPSCTDIGSGIAKLSEGKLEGDEDPSSCDAEAMREASFLEGLQVGCD
QMDSQNGEAEPSPSTPESDPSRSIPAELCEALQQKRDLTSPAPVLPEHGAMEGVISMGLY
GSSLHNYDIKVPPEQRFINLLQEKGMEAKSAPSQSHSEEDDEEEEDDDNSEAAADVAEDL
RGPRTRAGCDPETNELGGEEQSPGLPTPEDTCPEAVDGERESLGLGTLEGPGEPGPEGRE
DHSLDEENTLQDLPGQAQSQAFSPPAPLVGPPGAEPPHAREEDWGQGSEGQAGCREALHP
EPPGMKQEECEIRDEEEKAGSSQSQDGLEKYSEEESKSSTSVLPGEMDDLQDARAPTIAQ
LLQEKTLYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQQFETQSLIAAPAVGSNAGSR
NSFAESEAPDPSFNNGVLISQVQKEGFLTPAFAKDERKHRRLYEFEVERDAKQRSLEQLA
ATHIHSPIVLNGWREAAVDLSRNSDGSPGNSSPFPLNTNMPKLGTVNTLQGSLGMDLSGI
LQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKERPLPTRLQDVQEDQP
QPPQNTPLPDGPVAATSTPQPVPAAGSQAEKAVPNKSLLDWLRQQSDYTLDVPGFGTNFS
DKPKQRRQRCKDPSKLDINALTGEERVPVVHKGTGRRLGGATAPALKELPRWLDANLEYA
VAADWADIVKLSGYLPESKFNRILSEPVLRDAGPRRRGRRPRSELIKAPGVVADSSSGMG
PLFMNGLIAGMDLVGIQNMRNMQGIPLTGLVGFPAGFAAVPAGEDVKSTLSMLPMMLPGM
ATVPQMFGVGGLLNPPMTTTCTATAPTSLTSTTKSGTSNTEKATEDKQSSQDVKKETLSE
DKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSPGIGMALPGIQQTRHS
EAANLESQKRKRKKAKGESANPEPETVLLPEKEAANGQNCTEQTPPLSAEKEQDVPAEEE
LKEVNDTN
NT seq
8487 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagggataaatctgttggagagcatgagctggtgccattcctggccagctct
gtggcggtgcctcggtgctgctcagggcaggggcttttggacatgcgtgagagtgacgtc
cgtctgctggggatgaaggccaggtcgtcacggaggtgcattcaggattcggacagggag
agacaacggagcagaaatcctcctgctgctgtgtggtacctcttcgatactgagtgcttc
cctgctgccaccccaagcccagtggggttagaagaggcacggagaaggctgtcgagctta
aaagtgctgagccgctccccaatgtcggatgcctcggacacctgggagtgcaaggcgcag
gacccctttgccagcagcgaggagcaggacgaggtgccccaccaggtgacggccgcggac
gtgggcagccagcgccagtgccccgaggaggagcccaacggagctccccagaagcggcca
agtgcccagaacgggatgcaggacactgggggcgtaggcacgggggtgaaaaagaaacgg
aagaaaaaggatcagggagaacaggaagggggagaaaaagcagctgtggaggtgaaacca
aagaggagaagagagcctaaagaaccaaaagagcctaaaaaggccaaggagcccaagaag
cagaaggagcccaaacagagggaggtggccaagaagccccggaaacctcgggaacccaaa
gcccctaaggaacctaaagacaagaagagtggctctgagcctgcctccagagcaagaccc
aagaagagcagcaaggagcaggggcctacccccgtggagaagaagaagaaagggaagagg
aaaaatgagatcccagtggacactttggagttggatcaggatctcctgagcccgtccgtg
cagagcccagaggagtgtgtggagtcggctgacagccagaaacgccgctctggccggcag
gtgaagaggaggaaatacaacgaggacctggatttcaaggtggtggatgatgacggtgag
acaatagccgtgctgggagctgggagaacctctgcgctctccgcctccactctggcatgg
caggcagaggagcctcctgaggatgatgccaatatcatcgagaagatccttgcttctagg
atggtgcagaaggaggctcaccccggcggcctgacgtttgagatggaggagttctacgtc
aagtacaggaacttctcctacctgcactgtaagtgggcgactctggaggagctggagaag
gatcccaggatatcccagaagataaagcgcttccggaacaagcaggctcagatgaagcat
atttttacagagcctgatgaggatttgttcaacccggactacgtggaggtagatcgaatt
ctggaggtggctcacacgaaagaccctgacaccggggaggaggtgactcactacctggtg
aagtggtgctcgctgccctatgaggagagcacctgggagctggaggaagatgttgaccca
gggaagattaaagagtttgaagctctccagatccctccagaaatcaagcacatggtaacg
tacccagaggagcgcccagcatctgagtcctggcagaaactggagaagtcccgggagtat
aagaacagcaaccagctgcgggaatatcagctggaaggaatgaactggctgctctttaac
tggtataacaggaagaactgcatcctggctgatgagatggggctggggaagacaatccag
tcaatcaccttcctctcagaaatcttcctgatgggcatccatggcccgttcctcatcatc
gcacccctctccactatcaccaactgggagagggagttccgcacctggacggagatgaat
gccatcgtgtaccacggcagccagatcagccggcagatgatccagcagtatgagatggtg
tacagggacacacagggcaaccctctccctgggatcttcaagttccaggtggttatcacc
acctttgagatgatccttgctgactgcccagagctgaagaagatccagtggcgctgtgtg
gtcattgacgaggcccatcgcctgaagaacaggaactgcaagctgctggaggggctgaaa
ctcatggccctggagcacaaggtgctgctgacaggcacccccctacagaactcagtggag
gagctcttcagcctcctgaatttcctggagccacaacagtttccctcagagacggccttc
ctggaggagtttggggacctgaagacagaggagcaggtgaagaagctgcagtccatcctg
aagcccatgatgttgcgacggctgaaggatgatgtggagaagaatctggcacccaagcag
gaaaccatcattgaggtggagctgaccaacatccagaagaaatactaccgggcgattctg
gagaagaacttctccttcctgtccaagggtgccaaccagcacaatatgcccaacctcatc
aacaccatgatggagctgcggaagtgctgcaatcacccatatctcatcaatggggcggag
gagaagatcctggaagactttcgtaaaacacacagcccggaggcaccagacttccagctg
caggcaatgatccaggcagctgggaaactggtgctcatcgataaactccttcctaagctg
attgctggggggcacaaggtgctcatcttctcccagatggtgcgctgccttgacatcctg
gaagactatctcattcagaggcggtacacctacgagcgaattgatgggcgggtgcgagga
aacctgcgccaagctgccattgaccgcttctgcaagcccgactcagatcgctttgtcttt
ctcctgtgcacgcgggcaggtgggctgggcatcaacctgaccgctgctgacacctgcatc
atctttgattcagactggaacccacagaacgacctgcaggctcaagctcgctgccaccgg
atcgggcagagcaaggcagtgaaggtctatcgcctcatcaccaggaactcctatgagcgg
gagatgtttgacaaggccagcctgaaactgggcctggataaggctgtgctgcaggacatc
aaccgcaagggcagcaccaatggggttcagcagctctcaaagatggaggtggaggacctg
ctgcggaagggtgcctatggtgctctcatggatgaggaggatgaaggatccaagttctgc
gaggaggacatcgaccagatcctccagcgcaggacgcagaccatcacaatccagtctgag
gggaagggctccacctttgccaaggccagctttgtagcgtcaggaaacagaactgacatt
tccttagatgacccaaacttctggcaaaagtgggccaaaatagcagagctcgatacagat
gccaagaatgaaaaggagagcttggtcattgacaggccccgggtgcggaagcaaaccaaa
cactacaactccttcgaggaggacgagctgatggagttctctgagctggacagtgactcg
gatgagcgacccacacgctcgcggcgcttcaatgagaagacacggcggtacctgcgggct
gagtgcttccgcgtggagaagaatctgctcatattcggctggggacgttggaaagatatc
ctgacccatgggcggttcaagtggcacctgaatgagaaggacatggagatgatttgtcgg
gccttgctggtctattgcgtcaaacactacaaaggggatgagaagataaagagttttatc
tgggatctcatcacgccaacgaaggacggccagaaccaggctctgcagaatcactcaggc
ttgtcagcaccggtgcccagaggcaggaaggggaagaaaacgaagaaccagatgctgctt
cctgagataaagaatgcagactggcttgctacatgcaaccctgaggtggtcctgcatgat
gacagctacaagaagcacctcaaacagcactgcaacaaggttctgctgcgggtgcggatg
ctctactacctgaaggccgaggtgctgggggaggctgctgacaaagccttcgagggcacc
cctgccagagagctggatgtgctgctgccggacatcgactatgtggagatcccagtggac
tggtggaacgctgaagctgataaatctctgctcattggtgtcttcaagcacggttacgag
aggtacaacgccatgcgggcagacccagcgctgtgtttcctggagaaggtgggcatgcca
gatgagaagctgctctctgcagagcagggcgtcagtgacggggctcaggacactgctgaa
aggggcagcatggaaaaggaagagagcagtggagaaaaaatggaggggctgccaaagcag
gaggacatcgtggctgctggtgtgggcgaagctggagagaagcgggatgagccatcggca
gcccaggatggctccgactcagacagatcctgctggcctgtctcatctgccctcacagcc
agactgcggcggctcgtcactgtctaccagcgctgcaaccgcaaagagctgcctccccgt
gccgagatgctggtgcccggtaaccatggatactggctgcaggacgagatgttcaggaga
gcctcagagatggactcagtgaacaaagaaatgcagaaaaggtggaccaggagggagcag
gcagatttctaccgcaccgtctcctcctttggggtcatctatgatcaggagaagaagatc
tttgattggacccagttccgagccatctctcgtttggagaagaagacagatgagagccta
gagaagtacttctacagctttgtggccatgtgcaagaatgtctgtggtctcccgctgtgg
aaagaggatggtccccctgaccctgacatctatgtggagcctattacagaggaacgtgct
gccagaaccttgtaccgcatcgagcttctgcgaaaggtgcgcgagcaggtgctcaagtgt
ccacagctccacgagcggctcaagctgtgccggccgagcctctacctgccagtgtggtgg
gagtgtggcaaacatgatcgggacctgctaatcggcaccgccaagcatggcctgaatcgc
actgactactacatcatgaatgaccctcagctgtcttttttagatgcatacaggaactat
gcccagcataaaagaacagggatcccaggctcagaaaccctgtgctgcctttaccagact
aactccaaactctacagttcccctctgtatagccaggtggaccagacttgtgaatccctg
gagaatgaagctgagagtcagatcaagctagaaagcattgacaacactatgtcccagtct
gggggcagcccgccagatgcaaactgtgaaacattcatgtctaaggtccaggacatcatt
tccagtaactatgatgagagctctctgccggactcactgatgtgcatgatgtacgacgag
aaggcctgtaacagcgaacaaagctcccttgcccgagacagcccaagttgcacagatatt
ggaagtggcattgctaaactctctgagggcaagctagagggggacgaggatccgtccagc
tgtgatgcagaggccatgagagaggcttcgttcctggaggggttgcaggttggctgtgac
caaatggacagtcagaatggagaagctgagccttcaccttctactcccgaaagtgaccct
tcacggagcatcccagcagagctctgcgaagccttgcagcagaagagagacctcaccagc
cctgcgccagtgctgcctgagcacggtgccatggaaggagtcataagcatggggctgtat
ggttccagtcttcataactatgacataaaggttcctcctgagcagaggttcattaatctg
ctgcaggagaaaggaatggaagcaaagtcagccccaagtcagagccacagtgaggaagat
gatgaggaggaagaggacgatgataactctgaggcagcagcagatgttgcagaagacttg
cgtggtccaaggaccagagctggttgtgaccctgagactaatgaactgggaggcgaggag
cagagccctggcctccccacacctgaggacacttgccccgaagccgtggatggcgagaga
gagtccctggggctaggaacactcgaaggccctggggaacctgggccagagggaagggag
gaccacagcctggacgaggagaacaccctgcaggacttgcctggccaggcgcagagccag
gctttcagcccgcctgcacctctggtgggacccccaggggcagaacccccccatgccagg
gaggaggactggggacaagggtccgaggggcaggcaggctgtagagaagccctgcacccc
gagcccccagggatgaagcaagaagagtgtgagatcagagatgaggaggagaaagctggc
agcagccagagtcaagacggtctggagaaatactcagaggaagagagcaagagttcgact
tctgtcctgcccggggagatggatgatcttcaggatgcccgggcaccaaccatagcccag
cttttgcaggaaaagacactttactccttctctgaatggcctaaggaccgtgtgatcatc
aatcgcattgacaacatctgccatgccatcctgaagggcaagtggccttcgtccagccag
cagtttgagacgcagagcctgatagcggccccagcagtaggcagcaatgccggcagcagg
aacagctttgctgagtcagaagcccctgatcccagcttcaacaacggagtgttaatctcc
caggtacaaaaggaaggcttcctgacccccgcctttgcaaaggatgagcggaaacacagg
aggctgtacgaattcgaggtggagagagatgccaaacagaggagcttggagcagttagca
gcaacccacattcattctcccattgtgctgaacggctggcgtgaggcagctgtggacttg
tccagaaactctgatgggtccccagggaactcctctccgttccccctgaatacaaacatg
cccaaactggggactgtgaacacccttcaaggctccctgggcatggacttatctggcatt
ctccaggcagggttaatccatcctgtcacaggacaaattgtaaatggcagcctccgaaga
gatgatgctgccatgaggaggagacggggcaggagaaaaaatgtagaagggatggacctc
atcttcttgaaggagaggcctcttccaacaaggctgcaggacgttcaggaagatcagccg
cagcctccccagaacacccccctcccagatggaccggttgctgctacctcaactccacag
ccagtcccagctgcaggcagccaagcagagaaggctgtcccaaataagagtctccttgac
tggctccgtcagcaatccgactacacactcgacgttcctggcttcggcacaaatttttca
gacaagcccaagcagaggaggcaacgctgcaaggaccccagcaaattggacattaatgca
ctcacgggagaggagcgggtgccagtggtacataagggtaccggacggaggttaggggga
gccacggcaccagcattgaaggaattgccaaggtggcttgatgcaaacttggagtatgct
gttgcagctgactgggctgacattgttaagctttcaggctacttaccagaaagcaaattc
aaccgtatcctatcggagcctgtgctccgagacgcagggccccgtcggagggggagaagg
cccagaagtgaactcattaaagcccccggtgttgtagcagattcttcttctggaatggga
ccattattcatgaacggactgattgctggaatggatctggtaggaattcagaacatgaga
aacatgcaagggatccccctgactgggctggttgggtttcctgctgggtttgcagctgtg
cctgctggtgaggatgtgaaaagcaccctaagtatgttgcctatgatgctgccaggcatg
gctactgtaccacagatgtttggtgttggaggacttctgaacccaccgatgacaactact
tgtactgcgactgctccaacttcattaacaagcacaacaaaaagtggtacatcaaacaca
gagaaagctactgaggataaacagagtagccaggatgtgaaaaaagaaactctctccgaa
gataagcctggtcctagttctttttctaatcagacagaatccgcaataactaccagtagt
cctgtagcttttaacccatttcttatcccagggatgtcacctggactgatctatccgtca
atgtttctttcccctggcattggcatggcattgccaggcatacagcaaaccagacattct
gaggcagcaaacctggagagccagaagcggaagagaaagaaagctaaaggggaatcagca
aatccagaaccagaaactgtcttgctgcctgaaaaagaagctgcaaacggtcaaaactgt
acagagcaaacaccacctttatcagcagagaaagagcaggatgtaccagcagaggaggag
ctcaaagaagttaatgataccaattag
DBGET
integrated database retrieval system
