Cygnus atratus (black swan): 118249894
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Entry
118249894 CDS
T09349
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118249894 (PRDM11)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118249894 (PRDM11)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
zf_PR_Knuckle
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
118249894
NCBI-ProteinID:
XP_035406285
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Position
5:complement(12682993..12723634)
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AA seq
1184 aa
AA seq
DB search
MSENLKDCLNQTQASLGEMVTIKTEACSPHRDQEYGQPCSGRPDPQSMDVEPKKLKGKRD
LIVTKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPPGMEVVK
EPSGENDVRCMNEVIPKGHIFGPYEGQISSQDKSAGFFSWLIVDKNNRYKSIDGTDETKA
NWMRYVIISREEREQNLMAFQHSERIYFRACRDIRPGEKLRVWYSEDYMKRLHSMSQETI
NRNLTRGDKRLQREKSEKNVENQEDMRGPLQLTTLKQGKSPYKRSCDEGESHPQTKKKKI
DLIFKDVLEASLESAKFEENQVATSTPLSVRTASKYQAEDIFERCGTAMQHGSLNLGRNR
SEGEWKIPHGSSFSSAKEVGILEDEEEEPLSLKADSPTELSLASAQGNSHEIPTTSFCPN
CIRLKKKIRELQAELDMLRSGKLPEPPVLPPQVPELQEFSDPTASESIISVPTIMEDDDQ
EVDSADESVSNDMIAATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCR
QYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLF
NTAYHLALEGRPYYDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIR
QSPFLSIILDGQSDDVLADTVAVYVQYTSSDGPPATEFLSLQELGFSTTDSYLQALDRAF
SSLGIRLQDEKPTIGLGVDGANITASLRANLFMTIRKTLPWLLCLPFMVHRPHLEILDAI
SGKELPCLEELENNLKQLLSFYRYSPRLMCELRVTAATLCEETEFLGDIRAVKWIIGEQN
VLNALIKDYLEVVAHLKDVSGQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSR
LAYVFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAVKNLRVAE
AKFQSIREKICQKTQVILAQRFDSRSRTFVKACQVFDLAAWPRSTDELMSYGKEDMVQIF
EHLETVPSFSREVCREGMDTRGSLLMEWRELKVDYYTKNGFKDLLSHICKYKQRFPLLNK
IVQILKVLPTSSACCEKGRNALQRVRKNNRSRLTLEQLSDLLTIAVNGPPIANFDCKRAL
DSWFEEKSGNSYALSAEMLSRMSSLDQKPMLQSMDHGSEFYPDI
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaacttgaaggactgtttgaaccagacccaggcttccttaggggagatggtg
acaataaaaacagaggcctgctctccgcaccgggaccaggagtatggacaaccttgctct
ggaaggcctgatccgcagtccatggatgtagagcccaagaaactgaaagggaaacgggat
ttgatcgtgaccaagagcttccagcaagtggatttctggttctgcgagtcctgccaggag
tactttgtggatgagtgccccaaccacggccccccagtgttcgtctccgacaccccggtg
cctgttggcatccctgaccgggcagcgctgaccatcccgcctggcatggaggtggtgaaa
gagcccagcggggagaacgacgtgcgctgtatgaacgaggtgatccccaaaggtcatatc
ttcggaccgtacgaggggcagatctctagccaggacaagtctgcaggattcttctcgtgg
ctgattgttgacaagaacaaccgctataaatccattgatgggacagatgaaaccaaagca
aactggatgaggtatgtgatcatttcccgggaggagagggaacagaacctgatggccttc
cagcacagcgagaggatttacttccgtgcctgtcgtgacatccggcctggggagaagctg
cgggtctggtacagcgaggactacatgaagcggttgcacagtatgtcccaggagaccatc
aacagaaatctcacaagaggagacaaaaggttacagagggaaaagtcagaaaagaatgtg
gaaaatcaagaggatatgagggggccactccagctcacgacattaaagcaagggaagagc
ccctacaagcgcagctgtgacgagggggaatctcacccccaaacaaagaaaaaaaagatt
gacctcatcttcaaagacgtcctggaggcttcattggagtctgccaaatttgaagagaac
caggtagcaactagtacaccactttccgtcagaacagcatctaaataccaggctgaagac
atatttgagaggtgtggcactgccatgcagcacggctccctgaacctcggcagaaaccgg
agtgaaggggagtggaagatcccccatggttcctcttttagttctgccaaagaagtgggg
atccttgaagacgaggaagaagagcctctgtctctgaaagcagacagcccaactgagctg
tcactggcctctgcacagggcaactcccatgaaatccccaccacctccttctgccctaac
tgcatccgtctgaagaagaagatccgagagctgcaggccgagttagacatgctgagatct
gggaagttacctgagccacctgtgctaccgccccaggtacccgagctccaagagttctca
gaccccacagcttcagaaagcatcatctctgttcccactatcatggaggatgatgatcaa
gaggtggattctgctgatgaatcagtttccaatgacatgattgctgctacagacgagcct
tccaagatgtcttctgcaacgggccggaggatacggcggttcaagcaagagtggcttaaa
aagttttggtttctgcggtactccccgacattgaatgaaatgtggtgccatgtctgtagg
cagtacacagtgcaatcctctcggacttcagccttcatcattggctcgaagcagttcaag
atacacacaataaagcttcacagccagagcaacctccacaagaagtgcctgcagctttac
aagctcagaatgcacccagagaagacagaagagatgtgccgaaatatgaccctgctcttc
aatacggcctaccacttggctctggagggcaggccctactatgacttccggcctctggca
gaactactgagaaagtgtgaactcaaggtggtggatcaatacatgaatgaaggagactgc
caaatcttaatccaccatatcgcccgggctcttcgagaggacctggtcgagcgcatccga
cagtctcctttcctcagcatcattctggacgggcagagtgatgacgtgcttgccgacaca
gttgcagtttatgtacagtacacaagcagtgatgggcctccggcaaccgaattcctgtct
cttcaggaactgggcttttctacaacagacagttacctccaagcattagacagggccttt
tccagcctgggaatccgattgcaggatgagaagccaactattggcttgggagttgatggt
gctaacattaccgccagcctgagagctaacttgttcatgacaatcagaaagaccttgccg
tggcttctctgcttgccctttatggtacacagacctcatttggagattttggatgcaatc
agtgggaaggaactgccatgcctggaggagctggaaaacaatctgaagcagctgctcagt
ttctatcgttactctccccgactcatgtgcgagttgagggtcactgctgccactttgtgc
gaggagactgagttcttgggcgacattcgagcagtgaagtggatcattggggagcagaat
gtgctcaatgctctaatcaaggattaccttgaggttgtggcccatctcaaagacgtcagc
ggccagacccagagggcagatgcttccgcaattgccttggccctcctccagttcctaatg
gactaccaatcgattaaactcatctacttcctgctggatgtgattgctgtgctttcacgc
cttgcctatgtcttccaaggggagtaccttcttgtgtcgcaggtggacgataaaatagag
gaggctatccaggagatcagtcggctagcagactcacctggggagtacctgcaggaattt
gaggaaaacttccgtgaaagctttaatggcattgctgtgaaaaacctacgggtggctgaa
gccaaattccagtcaatcagagaaaagatctgccagaagacccaggtgatcctagcccaa
aggttcgattcccgtagccggacatttgtgaaagcctgtcaggtatttgaccttgcagct
tggcccagaagcactgatgagctcatgagctatgggaaggaggatatggtacaaatattt
gaacacctggagacggtcccatcattttccagagaggtttgcagagaggggatggacacc
cgagggagtttgctgatggagtggcgagaactcaaggtggattattataccaaaaatggt
tttaaagacttactcagtcacatttgtaaatacaaacagagattccccctcttaaataaa
atagttcagatcctcaaagtccttcccacctcatcggcctgctgtgagaaggggcgcaat
gccctgcagagagtgcgcaaaaacaaccgctctcggctcacactggagcagctcagtgat
ttgctgacaattgccgttaacgggccgcccattgccaacttcgattgcaaacgggcgcta
gatagttggttcgaggaaaagtcgggcaatagttacgcactgtcagctgagatgctgagc
aggatgtcgtctctcgatcagaagccgatgttgcagagcatggaccatggctctgagttt
taccccgatatttag
DBGET
integrated database retrieval system
