Cygnus atratus (black swan): 118252194
Help
Entry
118252194 CDS
T09349
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03320
PPAR signaling pathway
cata04148
Efferocytosis
cata04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118252194 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118252194 (RXRA)
03320 PPAR signaling pathway
118252194 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118252194 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cata03310
]
118252194 (RXRA)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
118252194 (RXRA)
Nuclear receptors [BR:
cata03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
118252194 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
DUF6021
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
118252194
NCBI-ProteinID:
XP_035411093
EnsemblRapid:
ENSACYG00000011419
LinkDB
All DBs
Position
19:complement(3867565..3965052)
Genome browser
AA seq
467 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccgctggatttctcaaaccaagtcaattccacgtccctg
aactcccccaccagccgggggcccatggccaccccatccctccacccgtccatcgggccg
ggcatcggctcctcgctgggctcgccgggtcagctccactcgcccatcagcaccctgagc
tcgcccatcaatggcatggggccccccttctccgtcatcagctcccccatgggcccgcac
tcgatgtccgtcccctccacgcccagcctgggattcggcaccagcagcccgcagctcaac
tcgcccatgaaccccgtcagcagctcagaagacatcaagccccccctggggctcaatggg
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacaggtcttcaggtaaacattacggggtgtacagctgcgagggctgc
aaaggcttcttcaagcgcacggtgcggaaggacctgacctacacgtgccgcgacaacaag
gactgcttgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgt
cttgccatggggatgaagcgagaagctgtccaggaggagaggcagcgggggaaagaccgc
aatgagaacgaggtggagtccacaagtagcgccaacgaggacatgcccgtggaaaaaatc
ttggaagctgaactcgccgtggagcccaagacagagacatacattgaagcgaacatgggc
ttgacgccgagctcgcccaatgacccggtgacgaacatatgccaggcagccgacaagcag
ctcttcaccctggtggagtgggccaagaggatcccccacttctccgagctgcccctggac
gaccaggtcatcctgctccgagcagggtggaatgagctcctaatcgcctccttctcccac
cgctccatagccgtgaaagacgggatcctcttagccaccgggctccacgtgcaccggaac
agcgcgcacagtgctggcgtcggggccatctttgacagagtactgacagaactcgtgtca
aaaatgcgagacatgcagatggacaagacagagctaggctgcctgcgagccattgtcctc
ttcaaccccgactcaaaaggtctctccaatccagctgaagttgaggcgttacgggagaag
gtgtacgcgtcgctagaggcgtactgcaagcacaaataccccgaccagcctgggaggttc
gccaagctcctgctccggctccctgccctccggtccatcggcctgaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacgccgatcgacaccttcttgatggaaatgctg
gaagcgccccatcaaatgacttag
DBGET
integrated database retrieval system
