Cygnus atratus (black swan): 118252198
Help
Entry
118252198 CDS
T09349
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118252198 (SEC16A)
Membrane trafficking [BR:
cata04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118252198 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
118252198
NCBI-ProteinID:
XP_035411099
EnsemblRapid:
ENSACYG00000009572
LinkDB
All DBs
Position
19:complement(3210669..3240892)
Genome browser
AA seq
2461 aa
AA seq
DB search
MQQPPQTVPAGAAAPPPAGLARNIYWRNTSLSKRANAAAAPVQPVTDPFAFGRQTPQGSP
LDNPSKGNALVTPSSSPAAFPQPAVLHPSPSHAGDNPHGLHASLSAPVSQPGINTSTFSN
VPVPSPSPGYVINSATEVHPDADLGLHGSAVPLHYNTGTALENSFSVHPGMVSLSNKPGG
RQDANRDPSDVPSGPAAAAVFPPPPQQPVSQWRPGQGNLRSPVRNFVPHPEPSSQPDIHN
ISQSSVSPPHPPPQTNLQHGPVHQGIPQNPVQAPLSVGCEKNGKNVSANDGHHMNSIQPG
NVFRQNAEMTNAWLNPAYQDQFYPQPPLQDSNFVIPTAQENNPKKQSPGVSETSNRPIPA
DRDSGTISMFFKGDEAENEEILSSEKNYVVEKTEFACQPNSSPLYHQPMQPQWVATNVLS
QAHIGTGSANEVVQKGMDVQYFPKIVSQQEAQAAKHAVFIGDDKARAGDASGIGGSQYEN
VENLECIQNQEVLPSEPRNVTASSPSAHPDLYRYGPLPGQMLPKNAVVSHAEGGPNLEAP
DSLPHPVRPDSVSSNYSNISHRSASSSARPPEQVGTFIQQESGKPDEESSARFFKQIDSS
PLGGDLSEVNLSKSYHSNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQA
KMVVELRENHPNQKNTKKNTAVPAASPGNLEQPPDNLETIFMPQVYPLPLAVTGEAGNML
HSGSVTENMQSLSERRSSTRAQGAIKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVP
AKQTVEVIQPPEEGLPDQQPNKPGNIAVQPSQDGNISSENLENPPKMGEEEALQSQASSG
YASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSSNENQPMKDAVVGDKP
LMGPQTSHTGGIISGENVPLPVMQVGSLLVNAPPNTNLLKHNLLQSPVNSSDTASNQPAN
LLMKTPLNLAPEGQKNVNFEGFVPEFASKPGANSSVSPGINLPSGSALLPPVNSVVQANN
SANRSNSKEEAAGVLDFTAPRTLEKSSASNSVQVHNQSLSGGPAYPPQAVGAGQVGPEMR
DKQHFYQQVTKDVQHQAVPDRGVQGALPSQPQTQAAQMQQPVSTQTSAPSNYPAAAGTGA
MQASQQRENQELGNQEASSAQLARYDQTSPDKQPMSGQPSSAQASTAPPTSTGQPVMPSA
QQDPQRAPLPQTPQDAFGPPQNPYYYYRHPYDAYQPPYPPPYPPADPRAASHLYYVEDSY
GQYDPRYRHYESSSAAYMEPGSYRYPEPERPSSRASHCSDRPSSRQGYPEDYYAKTGWTD
YYPGYYPNAYDYGDPSRWERYSSAYDPRYRDPRSYDQRYWYDAEHNPYQKREAYPYGNRH
DRYEDHWRYDPRFTGSFDDEAEPHRDPYGDEFDRRSVHSEHSAHSLRSSHSVHSHRSSFS
SRSQQSQLYRSNHDLTANAYETAAQAVSLHADYTYGGYAPNFGGQQPFTDYGYPTETGWS
TVEQAPLRPSTPEKFSVPHLCARFGPGGFLIKVLPNLPSEGQPALVEIHSMETMLQHSPE
QEEMRAFPGPLAKDDTHKVDVINFAQNKSTQCFKNENLIDKESASLLWDFIVLLCRQNGT
VVGTDLAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQVEEESGEAQLSFLTDSLITTI
DSLEKETERFRELLLYGRKKDALESAMKHGLWGHALLLASKMDSRTHARVMTRFANSLPI
NDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLA
SKGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFFKFATNEAIQRTEAYEYAQS
LGTQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPHYYSPVLIGQLIQM
SSQLRLFDPQIKEKPEQESLVEPSWLVRLRHVDGQIKEGAIAYNTDRSTPQQYPCSTPSS
ELDHTSQYDGGGVGHDTGPGTENALLASLLPNMSQQIQSVQLMPSAPQAILDGSAAVIPP
GDQEAVRSVPFYPVASQPIGPGPGFAPPGFSNQYGAEPSPLYLGSTLPPGGPPQDTESRE
EEQTNLETGMQRIPPDSPSRNSFPEQREEDFYNRMASMAPGRRSRSASQSSAYMGYGRRS
RTTSESSAHSVGRERSNSAAKQPSPSPPVPVGKETKKEVKKETASRKTGANWFRWLMGKG
KNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKPPPPPPTGFPKVPQTAPSGPGGPPSA
PVNIFSRRAAGSRARYVDVLNPGGTKSSGAVPAPADLFAPLAPMPVPANVFVPNSVPGEP
QPMEGSGAAEHTPVANQTNTEPAAAADPEYLNPTILPPGSGLPVSNPDGFQSGELSRSSS
MSSLSREVSQHFNQPAAVPPSGGPSAGTVQFYNPSQFAQSSAVTGSSRPGRIGQRKYPTL
K
NT seq
7386 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccacagactgttccagcgggagcagcagctccacctcctgcaggcctt
gcccggaacatttactggagaaacacctcgctcagtaaacgagcaaatgcagcagctgcc
ccggtgcagcctgtgacagacccttttgcctttggcagacaaactccccagggttcccct
ttagataacccatccaagggcaatgcgttggttacgccgagttcttccccggcggcgttt
ccccagccagccgttctgcatccttcaccatcacacgcaggggacaatcctcacggactg
cacgcgtctttgtcagctcctgtatctcaaccaggaataaataccagtaccttttctaac
gttccagttccttcaccgtccccaggatacgttataaacagcgctacagaagtgcatccc
gacgcagatctgggactccatgggtctgcggtaccattgcattataatacaggaacagca
cttgaaaattctttcagtgtgcatcctggaatggtgtctctgtcaaacaaacctggaggt
aggcaagacgctaacagagatccaagcgacgttccttcgggacccgctgcagcagcagtc
ttccctccacctcctcagcagcccgtgtctcagtggagacctggtcaaggtaacctgcgg
tctccggttcgaaattttgtgccccatcctgagccgtcttctcagcctgacattcataac
atttctcagtcttcggtcagccctcctcatcctcccccgcagacaaatttgcagcatggt
cctgtacatcaaggtattccacaaaatcccgtgcaagcgcctttatccgttggttgtgaa
aagaatgggaaaaatgtctctgcaaacgatggtcatcacatgaacagcatccagcctgga
aatgtgtttaggcagaacgcagaaatgactaatgcttggttaaatccagcttaccaggac
cagttttacccacagccacccttgcaagactccaattttgtcattcccacagctcaggaa
aacaaccccaaaaaacaatctccaggtgtgtctgaaacatcaaatagacccattcccgca
gaccgagattcaggaaccatctcgatgtttttcaaaggggatgaggcagaaaatgaagaa
atactttcatctgaaaaaaactacgtggttgagaaaaccgagtttgcttgtcagccaaat
tcgtcgcccttgtatcaccagccaatgcagccacagtgggttgcaacgaatgttctgtct
caggcgcacatcggtacaggttcagccaacgaggtggtacaaaaaggaatggatgtccag
tatttccctaaaattgtaagtcagcaggaggcacaggctgccaagcacgctgtgtttatc
ggcgatgacaaagcgcgtgcaggtgatgcatccggtatcggcgggtcacagtacgaaaac
gtcgagaacctggagtgcattcagaatcaggaagtgctgccaagcgagccacgcaacgtg
actgcttcatccccttctgctcaccccgatctgtacagatacggacccctaccaggtcag
atgcttccaaagaacgctgttgtgagccatgctgaaggaggaccaaatttggaggcgcct
gattccttacctcatcctgtccggcccgatagcgtatcttcaaactacagcaacatcagc
cataggagcgcttcgagctcagcgagacctccagagcaagtcggtacgtttattcagcaa
gaaagcgggaagcctgatgaagaatcttctgctcgcttctttaaacagatcgactcttct
cctctgggaggtgatctgagtgaggtaaacctgagcaagagctaccacagtaacctctcc
cagcctccaactccaagccctcctaagcctacaggagtgtttcagacgagcgcgaacagt
tcttttgaacctgtgaggtcccacggagttggcataaaacctgcagaaattgaccaggcg
aagatggtggttgagttaagagagaaccacccaaaccaaaagaataccaagaagaataca
gctgtgccagctgcgtcaccaggcaatctcgaacagccgccagataatctggaaactatt
tttatgcctcaggtatacccgctgcctctcgcagttactggtgaagctggaaacatgttg
cactctggatctgttacagaaaacatgcagtcattgtctgagcgaaggtcttcaacaaga
gctcagggagcgattaagaagtgtgacagcccagcaacgactctgtgggctcataatgag
ttacctaattttgggggaaatgttcttctagctcctgctgctcctgcagtgtatgtacct
gccaaacaaactgtggaagtcattcagccaccagaagaaggcctgcccgatcagcagcca
aataaaccagggaatattgctgtgcagccttcccaagatggaaatatatcttctgaaaat
cttgagaatcctcccaaaatgggagaagaggaggcacttcagtctcaggcaagttctggt
tatgcaagtttgttgtcttctccacctacagagtctttgcaaaatcagcctatcctgatt
gctcagcctaatcaaagctataacttggctcagccaattaatttttctatttctctgtct
aatcagctaagcagcaatgaaaatcagccaatgaaggatgccgtggttggggacaagcct
ttgatgggcccccagacttcacatactggtgggatcatctcgggggaaaatgtaccgctg
cctgtgatgcaagttggatctctattagttaatgcacctccaaatactaatctgttaaaa
cataatttattgcaaagccctgttaattcctctgacactgcctctaatcagcctgcaaac
ttgctcatgaaaacaccgcttaatttagctcctgaagggcaaaagaatgttaattttgaa
ggttttgttcctgaatttgctagcaaaccaggagctaattcatccgtctctcctgggatt
aatcttcccagtggaagtgcgctgctcccacctgttaattctgtagtacaggctaataat
tctgcaaatcgctcaaatagcaaagaagaagctgctggagtgcttgactttacagcgcca
cggacattggagaaaagcagtgcgagtaactccgtgcaagtgcacaatcagtcgctttct
ggtggtcccgcgtatcctccgcaggcagttggtgctggccaggtgggtcctgagatgcgt
gacaaacaacatttctatcaacaggttacaaaagatgtacagcatcaggctgtgccagac
agaggtgtgcagggagcgttgccatctcagccccaaacgcaggcagctcagatgcagcag
ccggtatctacacagacctcagctccctcaaactacccggctgctgcagggactggcgcc
atgcaggcatcgcagcagcgcgagaaccaggagctggggaaccaagaggccagttcagcg
cagctggcgaggtacgaccagacaagccctgataagcaacccatgtctggacagccatcg
agtgcacaggcttccacagctcctcctaccagcaccggccagccggtcatgccaagtgca
caacaagacccgcagcgtgcacccctgcctcagactcctcaggatgccttcggtccacca
cagaacccctactactactacagacatccttatgatgcttaccagcctccatatcccccg
ccttaccctcctgcggatcccagggcagcatctcatctttattacgtggaggacagctac
ggacagtatgacccacggtacagacactacgagagcagcagcgctgcttatatggagccc
gggagctatcgttatcctgagcccgaacgtcccagttccagagccagccactgctccgac
aggccttcttccaggcaggggtatcctgaagattattatgcaaaaactggatggactgat
tattatccaggctattacccaaatgcatatgactatggagatccaagtcgttgggaacgt
tactcgtcagcatatgaccccagatacagagatcctagaagttacgatcagaggtattgg
tatgatgctgaacacaacccgtaccagaagagagaagcgtatccatacggcaacagacat
gaccgatacgaagatcactggagatatgatcctcgttttactggaagctttgatgatgaa
gcagagcctcacagagatccttacggtgatgaatttgatagacgcagcgttcacagtgag
cattctgctcatagtctccgtagctcccacagtgttcacagtcaccggagcagttttagc
tctcgctctcagcaaagccagctgtatagaagtaaccatgatctaacggctaatgcgtat
gaaactgctgcacaggcagtgtcgctgcatgcagattatacgtatggtggatatgctcct
aactttggtggacaacagccttttacagattatggctacccgactgaaactggatggtca
actgtagaacaagcacctttaaggccatcaacgcctgagaaattttcagtgcctcatctg
tgtgctaggtttggtcctgggggattcttaataaaagtgctgccaaacctgccttcagaa
ggccagccagctctggttgaaatacacagtatggagactatgttgcaacattctccagag
caagaagagatgagagcgtttcctggtcctcttgctaaggatgacacccataaagtggat
gttattaattttgcacaaaataaatctacacagtgctttaagaatgaaaatttaatcgac
aaagaatctgcaagtctgctttgggacttcattgttctgttgtgcaggcagaatgggact
gttgtgggaacagacttggctgaacttttgctccgagatcataaaacagtatggcttcct
ggaaagtcccctaatgaagcaaatttgatcgatttcactaatgaggctttggaacaagta
gaagaggaatctggtgaagcccagctctcatttctcactgatagtcttataaccacaatt
gacagtcttgaaaaagagacagagagattcagagagttgctgctttatggccgtaagaag
gatgctttggaatcggcgatgaagcatggcttatggggtcatgctctgctacttgccagc
aagatggacagcagaacacatgcaagagttatgaccagatttgccaacagtctcccgatt
aatgaccctctgcagactgtttaccagctcatgtctggaaggatgccagctgcatccacg
tgctgtggagatgagaaatggggagactggaggcctcatctagcaatggtgttatccaac
ttgacaaacaatgtggacttggaatcccggaccattgcaaccatgggagacactcttgct
tctaaaggattgcttgatgctgctcacttttgttaccttatggcccaagttggttttgga
gtttacacaaggaagacaacaaaacttgtcctaattggatcaaatcatagcttgccattt
tttaagtttgccaccaatgaagccattcaaagaacagaagcctatgaatacgcacagtca
ctaggaactcagcctggctgcttgcccaatttccaggttttcaaatttatctatgcttgc
cgacttgctgaaatgggacttgctgctcaggccttccattattgtgaagtgatttccaga
actgtcctcaaagatccacactactattcacctgtacttattggccagctaatccagatg
tcatcgcaactgcgcctgtttgatccacagataaaggagaaaccagaacaggaatctcta
gttgaaccttcctggttggtaaggcttcgtcacgtggatggacagattaaggagggtgca
atagcttataacacagacagatccacaccacaacaatatccatgtagcacaccaagctct
gaattagaccataccagccaatatgatggaggaggagttggccatgacacgggcccaggc
actgaaaatgcattgttagcatccttattacccaatatgtctcaacagatacaaagtgtg
cagctgatgccgtcagcacctcaggctatacttgatgggtcagctgctgtgattcctcct
ggtgaccaggaagccgtccgaagtgtccccttctacccagtggcttctcagcccattggt
ccaggccctggctttgcacctccaggattttcaaatcagtatggagctgagccatcaccg
ctgtatttagggtcaacactaccaccaggagggccaccgcaagacactgaatcgcgggaa
gaggagcagacaaacctggaaacaggaatgcagagaattcctccagattctccttcacga
aactctttccccgaacagagagaggaggatttctataacagaatggctagcatggcacca
ggacgaagatccagatctgcatctcagtcttcagcatatatgggctatgggcgaaggtca
cggacgacttcagagtcctctgctcattctgtgggacgagaaagatccaactctgcagca
aaacagccttctccttctccacctgttcctgtagggaaggagactaaaaaagaagtaaaa
aaagagacagcatctagaaagactggtgcaaactggtttcgctggctgatggggaaagga
aagaatgaagctcaccttccagatgacaaaaacaaatccattgtttgggatgaacagaaa
cagcgctgggttaatttggatgaaccagaagaagagagtaaacctccaccgccacctcca
acaggatttcctaaagttccccagactgctccgtctgggcctggaggtccacctagtgct
cctgtcaacatcttctccagaagagcagcaggaagcagagcccgttatgtcgatgttctg
aatccaggtggaaccaagtcgagtggtgctgttcctgcaccagcagacctatttgccccg
ctggcaccgatgccagttcctgcaaatgtctttgttccaaactcagttccaggggaaccc
cagccgatggaagggagtggtgcagcagagcacacaccagttgcaaaccaaaccaacaca
gaacctgctgcagctgctgatccagagtatttaaaccctacaatccttccacctggatcc
gggctacctgtttccaaccctgatggcttccaatcaggagagctttcgcgctctagttca
atgagttcattatcacgtgaagtaagccagcattttaatcagcctgccgctgtaccacct
tcggggggaccttcagcaggaacagtacagttctacaatccttctcaatttgcacaatct
tctgcagtcactggaagttcaaggccaggaagaattggacagaggaagtatccaacgctg
aagtag
DBGET
integrated database retrieval system
