Cygnus atratus (black swan): 118252851
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Entry
118252851 CDS
T09349
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118252851 (HNF1A)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118252851 (HNF1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
118252851
NCBI-ProteinID:
XP_035412445
EnsemblRapid:
ENSACYG00000005960
LinkDB
All DBs
Position
17:4483847..4498360
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AA seq
638 aa
AA seq
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MVSKLSHLQVELLGALLESGLTKETLIKALSEVEPYMLQSESQRAINALQTEKGESCPEI
PNLPNGMGESRLSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQF
THAGQGILTEEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECN
RAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTFSGPQPTSAPPL
TPHNSSSLQPPSALSPSKVHGVRYNQQPASEAESSSSNHHGNNSMVTTQTILHQVSPPGL
EPSQNLLSTDTKLISASGGTLPPVSTLTALHSLEQNPHALSQQTQNLIMASLPGVMAIGA
GETSSLAPAFTNTGASTLVIGLTSTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPL
MQQVQSHINQSPFMATMAQIQNPHALYGPKSEVTQYTHTGLLPQTMVITDTANLSALTNL
TPTKQVTPLAFTSDSETHTESGMHTPVSQAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSS
SLVLYQSSDSTNSHSQLLPASHNVIETFISTQMASSTQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgaagctgagtcatcttcaagtggagctgctgggagcgctgctggagtcgggg
ctaaccaaggagaccctgattaaggcactgagtgaagtggaaccctacatgctccagagt
gaaagtcagcgcgccatcaatgccctccagacagagaaaggggaatcttgtcccgaaatc
cctaatctccccaatggaatgggggaatccaggttatcggaagatgaaacctctgatgac
ggggaggaatttacccctccgataatgaaggagctggaaaacttgagccctgaggaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgggtagcgaag
atggtgaaatcctacctccagcagcacaacatccctcagcgcgaggtggtggacactact
ggtctgaaccaatctcacctctcacagcacctcaacaagggcactcccatgaagacccaa
aaaagggcagccctctacacctggtacgtccgcaagcagcgagaggtggcccagcaattc
acacatgctggccagggtatcttgacagaggagcccatgggagacgatctgcccaccaag
aagggacgaagaaaccgctttaagtggggccctgcctcacaacagatcctgttccaagcc
tacgagagacagaaaaaccccagcaaagaagagagagaggcactggtggaagagtgcaac
agagcagagtgtattcagagaggagtttccccatcccaggcccagggcctgggctcaaac
ctggtgactgaggtgcgagtttacaactggtttgccaatcgcaggaaggaggaggctttc
cggcacaagctggccatggacaccttcagcgggccacagcccacctctgctccccctcta
actcctcacaactcatcctccctccagccaccatccgctctctcacccagcaaagttcat
ggagtgagatacaaccaacagccagccagcgaggctgagtcctccagcagcaaccaccac
gggaacaactccatggtgaccacccaaaccatcctgcaccaggtttctccccctgggctg
gagcccagccagaacttactgagcacagacactaagctgatctcggcttctggaggaact
ctcccccctgtcagcaccctgaccgccttgcatagcctggagcaaaacccacacgcactg
agccagcaaactcagaacctgatcatggcatcactgcccggtgttatggcaatcggagct
ggcgagacctcatccctagcaccagcgttcaccaacacaggtgcctccaccctcgtgata
ggccttacttcaacccagccccagagcgttcccgtgataaacagcatggggagcagcctc
accaccctgcagcctgtccagttctcccagcagctgcacccgtcctaccagcaacccctc
atgcagcaggtccagagccacataaaccagagccccttcatggctaccatggcccagata
cagaaccctcacgctctctacggccccaagtccgaggtgacccagtacacacatacaggc
ctcttaccacaaaccatggtgataacagacaccgccaacctcagcgccctgactaacctg
acaccaactaaacaggtaacgcctctagcgttcacatctgactcagaaacccacacagag
tctgggatgcacacaccggtatcacaggcaccgacgatacatttacagaaccaagacaca
accatccagcaccttcaacccggccctcgcctcacctcaagccctgctgtgtcctccagc
agcctggtgctgtaccagagctctgactccaccaacagccacagtcagctgctgccagcc
tctcacaacgtcatcgagaccttcatctccacgcagatggcctcctccactcagtaa
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