Cygnus atratus (black swan): 118258132
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Entry
118258132 CDS
T09349
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 isoform X1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118258132 (HCN4)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118258132 (HCN4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
118258132
NCBI-ProteinID:
XP_035422625
EnsemblRapid:
ENSACYG00000014834
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Position
11:9676167..9776352
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AA seq
1217 aa
AA seq
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MDKLPPSMRKRLYSLPQQIGPKASIMDEEEDSDKDTRRKSIRLKPLPSPSAGSTRALGGD
PSRGGDPGLLETEASSKGAKTSTNGDCRRFKGSLSSLTSRHLHDAAEEKRLIGGEGEPAS
PGEDKSPPGSGETEQGLPAPPPPASPPESQQQPPRACSSTSIKVEGGGGCDQITPDEEQR
LGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDL
TMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEII
LDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLR
LLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPD
DCWVSLNRMVNDSWGKQYSYALFKAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYA
MFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEE
SILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGT
IGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVD
NFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQ
HDREMAHCAHNVQAAAAAAAAAASTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPT
AIFRPPVSVLGSLGQQSSQTPRQLKRLQSLIPSAGPSAVGSPSSTPSQLHTPGAETPSSS
SYHIQQLAGYSAAAGLGQFQVGSPPGGSSQTGLSGASSVGLSQLQQAPSGSPLGTAQPTQ
QQQQQQQQQQQQQQQPPLSSSGFGHFQQATTSSPSASLTQLASNSPPGLLNQFQPTTRPL
QAGQLQQLSGSGTLGAINHFQPPPSSNSPSASLSQLAQASGGPSSGLCQTHPSALGSVTG
TIAQLHQERSPFASMSPLQQSGVASPCYTPSGLSPPTQSPVATRTFQCGPSGASGSHGSL
LLPQTASPPPQILQSKSTPPVPPGRLNQDIKLISASQPSLPQELAQTLSQSSHSSRESVS
SFSPFPGGGTGLLGKPCSSIPGRVTLPRQMSSGSLPHPLVFGASTAGTASLTAGGRKESI
VLTGDLEPVRSKLPSNL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgcccccctccatgcgcaagaggctctacagcctgccccagcagatagga
cccaaggcgtcgatcatggatgaggaggaagacagcgacaaggacacccggaggaaaagc
atcaggctcaagccactgccttcgccctctgctgggagcacccgggcactcgggggagac
cccagcagagggggagaccctggcctcctggagacagaggcaagcagcaagggcgccaag
accagcaccaatggggactgccgccgcttcaaagggagcctgtcctcgctgaccagcagg
cacctccacgacgcggctgaggagaagaggctgatcggcggtgaaggggagccagcctcc
cccggagaggacaagagcccccctggcagtggggagacggagcagggactgccagcaccc
ccgccaccggcatcccccccggagtcccagcagcagcccccccgagcttgctcctctacc
tccatcaaagtggaaggaggtggagggtgcgaccagatcaccccagatgaggagcagagg
ctgggccaagctggtttcatgcagaggcagtttggggccatgctccagccgggggtcaac
aaattctccttgaggatgtttggcagccagaaggccgtggagcgggagcaggaaagggtt
aagtctgccgggttctggatcatccatccctacagtgacttcaggttttattgggatttg
accatgctgctgctgatggtagggaacctgatcatcatccctgtgggcatcactttcttc
aaggatgaaaacactaccccatggattgtcttcaatgtggtttcggacacgttcttcctc
atcgaccttgtcctcaacttccgaacaggcatcgtggtggaggacaacacggagatcatc
ctagacccacagcggatcaagatgaagtacctgaagagctggtttgtggtggattttatc
tcctccatccccgttgactacatcttcctgatcgttgaaacccgcattgactctgaggtg
tacaagacagcccgggcgctgcgcattgtgcgcttcactaagatcctcagcctcctgcgg
ctcctgcggctctcccggctcatccgctacattcatcagtgggaggagatcttccacatg
acctatgatctggctagcgcagtggtgcgcattgtgaacctgatcgggatgatgctgctg
ctgtgtcactgggatggctgcctccagttccttgtgcccatgctgcaggacttccccgat
gactgctgggtatccctcaaccgcatggtgaatgactcctgggggaagcagtattcctat
gcgctgttcaaggcaatgagtcacatgctctgcattgggtacgggcagcaggcgcccgtt
ggcatgtcagatgtgtggctcactatgctgagcatgattgtcggtgccacctgctatgcc
atgttcatcggccatgccacagccctaatccagtctctggactcctcacggcgtcagtac
caggagaagtacaaacaagtggagcagtatatgtccttccacaagctccctgcggacatg
cggcagcgcatccatgactactacgagcaccgctaccaggggaagatgttcgatgaggag
agcatcctgggagagctgagtgagcctctccgagaggaaatcatcaacttcaactgccgg
aagctggttgcctcgatgcccctcttcgccaacgcagatcccaactttgtgacatccatg
ttgaccaagctgcggttcgaggtgttccagcctggggattacatcatccgcgagggcacc
attggcaagaagatgtacttcatccagcacggagtggtgagcgtcctcaccaaaggcaac
aaggagaccaagctggcagatggctcctactttggagaaatttgcctgctgactcgcggc
cggcgcacagccagtgtgcgagctgatacctactgccggctctactccctctcggtggac
aacttcaacgaggtgctggaagagtatcccatgatgcggcgagcttttgaaacggtggct
cttgacaggctggacagaattggtaagaaaaattccattctgctgcataaagtccagcat
gacctcaattcaggtgttttcaactaccaagagaatgagatcatccagcagattgtgcag
cacgacagagagatggcacactgtgctcacaacgtccaggctgctgccgccgccgctgcc
gctgctgcatccacacccacacccgtcatctggactccactgatccaggcacccctgcag
gctgcagcagccaccacttctgtcgcgatagctctgacccaccacccgcgcctccccaca
gccatcttccgtcccccggtgtccgtcctgggttccctggggcagcagtccagccagacc
ccaaggcagctgaaaaggcttcagtctctaatcccatcggctgggccttctgctgttggc
tccccctccagcactccgtcccagctgcacacaccgggagcagaaaccccgtcatcctct
tcctaccacatccagcagctcgcaggatactcggctgccgccggcttaggccagttccag
gtgggatcccctcccggtggctcgagccagacaggtttgagtggcgcatcctctgtggga
ctgagccagctccaacaagcaccatctggatcacctttagggacagctcagcccacccag
cagcagcagcaacaacagcagcagcagcagcagcagcagcagcagccacccctttccagc
agtggattcgggcacttccagcaagccacaactagctctccatcagcatcactcacccag
ctcgcatcaaattcaccccctggccttctcaaccagttccagcccaccacgagaccactg
caggcgggacagttacagcagctctcaggcagtgggactttgggggcaattaatcacttc
cagccccctccttcttctaactcgccatccgccagcctaagccagctggcacaggcctct
ggtgggccgtcctcaggcctgtgccaaacacatccaagtgcattaggatctgtaactgga
acgatagcccagctccaccaggaacgatcgccttttgcctccatgtctcctctccaacag
tccggcgtcgcctctccctgttataccccttctggccttagtcctcctactcagagccca
gtggcaacaagaactttccagtgtggcccttctggggcctcaggctctcacggctctctg
ctcctgcctcagaccgccagcccacctccgcagatcctgcagtccaaaagcacgccgcct
gtgccgcccggacgcctgaaccaggacatcaagttgatttctgcttcccagccatctttg
ccccaagagctggctcagacactgagccaaagttctcattcctctagagaatctgtttcc
agcttctctccttttcctggtggagggactggacttctcgggaagccttgtagctcaatt
cctgggcgcgtgactttaccacgtcagatgtcctcaggttctttaccacatccgctggtg
tttggggccagcactgcgggcactgcttccctgactgctggtgggcggaaagaatccata
gtgctcacaggggatctggagcctgtcagatccaaactgccctccaatttgtga
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integrated database retrieval system
