Cygnus atratus (black swan): 118259648
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Entry
118259648 CDS
T09349
Symbol
LRRC4
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118259648 (LRRC4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRRNT
V-set
ig
Ig_2
DAG1
Ig_6
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
118259648
NCBI-ProteinID:
XP_035425218
EnsemblRapid:
ENSACYG00000005927
LinkDB
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Position
1:complement(1064905..1066874)
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AA seq
645 aa
AA seq
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MKLLRQVPGHHTWSASLFACLTVHAWTLCAAAAASPAAPSCPAACSCSNQLGKVVCTRRG
LAQVPPGIPSNTRYLNLMENNIQLIQADTFRHLHHLEVLQLGRNAIRQIEVGAFNGLASL
NTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLE
YISEGAFEGLYNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNNFPEIKPGSFHGLKSLK
KLWIMNSQISLIERNAFDDLTALVELNLAHNNLSSLPHDLFAPLRYLVELHLHHNPWDCD
CDILWLSWWLREYIPTNSTCCGRCHAPLHMRGRFLVEVDQTSFQCSAPFIMDAPMDLNIS
EGRVAELKCRTPSMSSVRWLLPNGTVLSHASSHPRISVLNDGTLNFSHVLLTDTGLYTCM
VTNVAGNSNASAYLNVSTAELNTSNYSFFTTVTVETTEISPEDVSPKFTKPVPTTSTGYQ
PAYTTTTTVLVQTTRTPKQVAVPTADAGDKMQTSLDEVMKTTKIIIGCFVAVTLLAAAML
IVFYKLRKRHQQRSTVTAARTVEIIQVDEDIPAAAAXAPAGVSGEGAVVLPAVHDHINYN
TYKAAHGAHWTENSLGNSLHPPVTTLSEPYIIQTHTKEKVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttgcggcaggtacctgggcaccacacctggagcgcgtccctgttcgcctgc
ctgaccgtccacgcctggacgctctgcgccgccgccgccgcctcgcccgccgccccgagc
tgccccgccgcctgctcctgcagtaaccagctgggcaaggtggtctgcacgcgccgcggg
ctggcccaggtgcccccgggcatcccctccaacacccggtacctcaacctgatggagaac
aacatccagctgatccaggcggacaccttccgccacctgcaccacctggaggtcctgcag
ctgggcaggaacgccatccggcagatcgaggtgggcgccttcaacgggctggccagcctc
aacaccctggagctcttcgacaactggctgaccgtcatccccagcggggccttcgagtac
ctctccaagctgcgggagctgtggctgaggaacaaccccatcgagagcatcccctcgtac
gccttcaaccgggtgccctccctcatgcgcctggacctgggcgagctgaagaagctggag
tacatctccgagggggctttcgagggcctgtacaacctcaagtacctcaacctggggatg
tgcaacatcaaggacatgcccaacctcacgcccctggtggggctggaggagctggagatg
tcggggaacaacttccccgagatcaagccgggctccttccacgggctcaagtcgctcaaa
aagctctggattatgaactcgcagatcagcctgatcgagcgcaatgccttcgatgacctc
acggcgctggtggagctcaacctggcgcacaacaacctctcctccctgccccacgacctc
ttcgccccgctgcgctacctggtggagctgcacctgcaccacaacccctgggactgcgac
tgcgacatcctctggctgtcctggtggctgcgcgagtacatccccaccaactccacctgc
tgcgggcgctgccacgcgcccctgcacatgcggggcaggttcctggtggaggtggaccag
acctccttccagtgctcggcgcccttcatcatggacgccccgatggacctcaacatctcc
gaggggcgggtggccgagctcaagtgccggactccttccatgtcctccgttcggtggttg
ctgccgaacgggacggtgctgagccacgcgtccagccacccgcgcatctccgtcctcaac
gacggcaccctcaacttctcccacgtgctgctgacggacaccggcctctacacgtgcatg
gtgaccaacgtggcggggaactccaacgcctcggcctacctcaatgtgagcacggccgag
ctcaacacctccaactacagcttcttcaccaccgtcacggtggagaccacggagatctcc
cccgaggacgtctcccccaagttcaccaagcccgtgcccaccacctccacgggctaccag
ccggcctacaccaccaccaccaccgtcctggtgcagaccacgcggacgcccaagcaggtg
gccgtgcccaccgccgacgccggcgacaagatgcagaccagcctggacgaggtgatgaag
accaccaagatcatcatcggctgcttcgtggcggtgacgctcctggccgcggccatgctc
atcgtcttctacaagctccgcaagcggcaccagcagcgcagcaccgtgacggccgcccgg
acggtggagatcatccaggtggacgaggacatcccggcggcggcggcannggcgcccgcc
ggcgtctcaggtgagggggcggtcgtgctgcccgccgttcatgaccacattaactacaac
acctacaaagccgcgcacggggcccactggacagagaacagcctggggaactcgctgcac
ccccccgtaaccaccctctctgaaccctatatcattcagacccacaccaaggagaaagtg
caggaaactcagatatga
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