Cygnus atratus (black swan): 118259857
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Entry
118259857 CDS
T09349
Symbol
MEX3D
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118259857 (MEX3D)
04121 Ubiquitin system [BR:
cata04121
]
118259857 (MEX3D)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118259857 (MEX3D)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118259857 (MEX3D)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118259857 (MEX3D)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
zf-RING_2
KH_2
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
118259857
NCBI-ProteinID:
XP_035425588
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Position
26:complement(4606749..4617325)
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AA seq
600 aa
AA seq
DB search
MPGSIYQPDGGQAARGPPRCLALLSPPPPPPPPTGQEPEPEAEREEQQQPPPPPPDEAAA
LRFALEQLSLLGLDEAAGEALEEAEPGEALGGHRGTGGSPPLTGTASPPPPSSSSSSSSS
XPPPPPHHHHPGVFGPFAPHLPLPEQMSILGGRKKSVNMTECVPVPSSEHVAEIVGRQGC
KIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSMIRATRNKVNGL
TGAMQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEV
TGMPENVDRAREEIEAHITMRTGSFIDVNADNDFHTNGTDVCLDLQGGTTGLWAKAPHPA
RRPAAALCNDSLSSLGSASTESFYSGRVADASPTSPYSTSSGFAFSEPPASLGSEECDFG
FDFLALDLTTPTTIWSPFERAGNPLQAFSGCSSSVGGSQRRSSGAATPRHSPTLPESTGG
ALEHPLARRIQSDPVSTLSWLPTQGSLSSFSTSTGYSSSSSLPGSISAASGSPTDSSSSD
GHRKSSRECMVCFESEVIAALVPCGHNLFCMECAMRICGKAEPECPACHTPATQAIHIFS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccatctaccagcccgacggcgggcaggctgcccgcggcccgccccgctgc
ctggcgctgctcagccctccgccaccgccgccgccgcccaccgggcaggaaccggagccc
gaggcggagcgggaggagcagcagcagccgccgccgccgccgccggacgaagcggccgcc
ctgcggttcgccctggagcagctgtcgctgctggggctggacgaggcggcgggggaggct
ctggaggaagcggagcccggcgaggctctgggaggccaccgggggaccgggggcagcccc
ccgcttaccggcaccgcctcccccccccccccctcctcctcctcctcctcctcctcctcc
nnccctcctcctcctccccaccaccaccaccccggcgttttcgggcccttcgccccgcac
ctcccgctgcccgagcagatgagcatcctgggtggcaggaagaaaagcgtgaacatgacc
gagtgcgtgcccgtgcccagctccgagcacgtcgccgagatcgtgggacgccaaggctgc
aaaatcaaagccctgcgcgccaagaccaacacgtacatcaagacgccggtcaggggcgag
gagcctgttttcatcgtgaccgggaggaaggaggatgtggagatggccaagagggagatc
ctctcggccgccgagcacttctccatgatccgggcgacgcgcaacaaagtgaacgggctg
acgggcgcgatgcaggggcctcccaacctgccgggacagaccaccatccaggtgagggtc
ccgtaccgcgtggtggggctggtggtgggccccaagggagccaccatcaagcgcatccag
cagcagacgcacacctacatcgtgacgcccagccgggacaaggagcccgtcttcgaggtg
acaggcatgcccgagaacgtggaccgggcccgggaggagatcgaggcacacatcaccatg
cggacaggctccttcatcgacgtcaacgccgacaacgacttccacaccaacggcaccgac
gtctgcctcgacctgcagggcggcacgaccggcttgtgggccaaggccccgcaccctgcc
cggcgccccgccgccgccctgtgcaacgacagcctcagctccctgggcagcgcctccacc
gagtccttctacagcgggcgggtggcggacgccagccccaccagcccctacagcaccagc
agcggcttcgccttcagtgagccgccggcctcgctgggctcggaggagtgcgacttcggc
ttcgacttcttggccctggacctcacgacgcccaccaccatctggtcgcccttcgagcgc
gccggcaacccgctgcaggccttcagcggctgctcctcctccgtcggcggctcgcagaga
cgcagcagcggggcggccacgccgcgccactcacccaccctgcccgagagcaccggtggg
gcgctggagcaccccttggcccgccgcatccagagcgaccccgtcagcaccttgtcctgg
ctgcccacccaaggctcgctctcctccttctccaccagcacgggctactcctcctcctcc
tccctgcccggcagcatctcggctgcctcgggctcgcccaccgactcgagcagctccgac
gggcaccgcaagagctcccgcgagtgcatggtgtgcttcgagagcgaggtgatcgccgcc
ctggtgccctgcggccacaacctcttctgcatggagtgcgccatgcgcatctgcggcaaa
gccgagcccgagtgccccgcgtgccacacgccagccacccaagccatccacatcttctcc
tag
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