Cygnus atratus (black swan): 118260137
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Entry
118260137 CDS
T09349
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X3
KO
K16175
protein scribble
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118260137 (SCRIB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
118260137
NCBI-ProteinID:
XP_035426067
LinkDB
All DBs
Position
2:160179661..160299404
Genome browser
AA seq
1653 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTEN
MLTALPKSLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLSLLPAELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKVDDEEESGAERRGLQRRATPHPSEL
KVMKKVIEVRRNEVHAAKPGTDLNSPKSEEKRLSATSNRSEDSHLSNSTASADFRGEEQG
EEGQRSWPNGQLSEMQEPEKVVKPKAEEEHKEAAVQEEEDVEVEYNEPTVHFAEDTLIRS
EDEDEDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEEL
GSRNNNVEPEDQEEAWDEDDRKNGALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTIV
RQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAE
HHVAVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPERPEGA
PPTERYSTCLMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGILHVGDRV
ISINGVDMTEARHDQAVALLTASSPTIVLLVEREGAEQLSEGDSPGVPRVRMHSPPPPPS
HGESPPEETPSCKELQRNHLSKSLEDQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPFGIH
EPGVFISKVIPRGLASRSGLRVGDRILEVNSIDLRHATHQEAVNALLSNTQELTVLVRRD
PPPPGMQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLK
VGMRILEVNHQSLLGMTHTEAVQILRSVGDTLLVLVCDGFDPKAAAAIEMSPGIIANPFA
AGIGRKNSLESISSIDRDLSPEELEILQKEMEMVREATQWEREEMEKVAPASESGTGISR
RETPYSPSNQQASINFIASQDDSKSPKPPSPPSPDEIPINVKQAYKTFAAVPLSHPLLET
QVLMPSGLHSPEQRSFRERQKYFEVEVKQQQMDKPPKRVSLVGEDDLKKMKEEEARKLQQ
KRTLLLEEEVEEDEMIKQVPEMSMQSSVIIEGVEYKFERLNGRSIQPPGTRSSEVNENNS
SQRNSLEEAMKPEQRTNSISGLSPLNLGAGDPVAPVRTAKAERRHQERLRMQSPELLSSQ
EKELSPAERRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSKEGKKRSTLEQLAESPSP
VPTPSPTPLEDCSPRNVTSPGRLSPDAADDLRYIDDRNNSVPQEQDGQPDEEETLLTHDS
STPTASALEEMALYSSKRKLRHSRRSLETAVPT
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtgcatgccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgttcgctggag
gagctgctgctggacgccaaccagctccgcgagctgcccaagcctttctttaggcttctg
aacctgcgcaaactgggcctgagcgacaatgaaatacagagacttccccctgaggttgcc
aacttcatgcagctggtggaactggacatctcccgtaacgacattccagaaattcctgaa
agcatcaaattctgcaaatccttggagatcgcagacttcagcgggaatcccctctccaga
cttcctgagggtttcacacagttgcggagcctgggccatttggccctgaatgatgtgtcc
ctgcagagcctccctaatgacattggaaatttagcaaacctggtgactttggaactacgt
gagaacctgctaaagactctaccaacttcactctcattccttgtcaagttagaacagttg
gatcttggtggcaatgacctggaagtactgccagatactctgggagcgctaccaaacttg
cgcgagctttggttagaccggaaccaactctcagccctgcctccagagctgggtaatctc
cgccgtttggtctgtctggatgtgtcagagaacaaactagagcagttgcccaatgaggtc
agcgggctagtagcactgacagacttgcttctgtcacagaacctgttggaatgcattcca
gatgggattggtcagctgaagcagctctccatcctcaaggtggaccagaatcggctgaca
gaggtgacagagtcaattggggactgtgaaaatctgtcggaactcatcttgacagagaac
atgttgacagccttaccaaagtcccttgggaagctgaccaagctgacgaacctgaatgtg
gatcggaaccgactaacatcccttccagctgagattggaggctgtgccaatctgaatgtg
ctgtccttgcgagacaatcgcctgtccctcctgccagcagagcttgccaacaccaccgag
cttcacgtccttgatgtggctgggaacagactacaaaacttgccgtttgctttgacgaat
cttaacctgaaagccctgtggctggcagaaaatcagtcccagcccatgctgaaattccaa
acagaggatgatgaaaagacaggagaaaaagttctcacttgttacctgcttccccagcag
ccttctcctagcctagagaatcttttgcagaacagtgtggatgagagctggacagacacc
aatttaaacagagtcagtgtgattcagtttctggatgaacccaaagtggatgatgaagag
gagtctggagctgagagacggggcctacagcgcagagcaacccctcatcccagtgagctg
aaggttatgaagaaagtgattgaagttcggcgcaatgaggtacatgctgcaaaacctggc
acagacctgaattcacctaagtcagaagagaaaagactgagtgccacatcaaatcgcagt
gaggactcacacctttctaacagcaccgcctctgctgacttcaggggagaggagcaggga
gaggagggacaaaggagctggccaaatgggcagctgtctgagatgcaggagccggagaag
gtagtaaagccaaaagctgaagaggagcataaagaagcagctgtccaagaggaggaagat
gtagaagtggaatacaatgagcccactgtacactttgctgaggacacactaataaggagt
gaagatgaggatgaagatgaagagcgaccattcccagtggagaaacagaggcttatccgc
aaggacacaccccattataagaaacactttaagataactaaactgcccaagccagaggca
gtggtggcactcctacaggggctgaacagtgatggagtcccaaaagaggaagaggagctg
ggaagccgcaataacaatgtggagcctgaggatcaagaggaagcatgggatgaggatgac
agaaaaaatggagctttatctgctcagccatcagtgaagggggtgtcgtttgatcaagcc
aataatctgctgattgaacctgctcgcattgaggaggaagagttgacattgacaatcgtg
cggcagacaggggggctgggcatcagcatcgcagggggcaagggctccaccccctataag
ggtgacgatgagggcatctttatttcccgtgtgtcagaagagggacctgcagctcgtgca
ggggttcgtgttggggacaagcttctggaggtgaatggcgtatccttgcattgtgctgag
catcatgtggcagtggaagctctgcgtggatcaggaagctctgtctccatgacagtcctg
cgggagcggatggtggagccagagaatgccatcaccgtcacaccgcttcgccctgaggat
gactacagccctcgtgagaggcgaggtggcctacgcttcccagagcggcctgagggggca
cctcccacggagagatactccacctgccttatgcgcaatgagaagggtctgggcttcagc
attgctggtggcaaaggttccacaccctaccgggctggtgacacggggatctttatctca
cgaattgcagagggtggtgcagcccatagggacgggatcctgcatgtaggagaccgggtc
atctcgatcaatggggtagacatgacagaagccaggcatgatcaggcagtagcgctgctt
accgcatcctcccccaccatcgtgctgctggtagagagagagggtgcagagcagctcagc
gagggagactcaccaggcgtgccacgagtgcgcatgcactccccaccaccgcctcccagc
catggggagagcccacctgaggagacaccttcctgcaaggaactgcaaaggaaccatctg
tctaaaagcctggaggatcaatatcccattgaggaaatacaccttgtaaaagcaggtggt
cccctgggactcagtatcgtaggaggcagtgaccattcaagccatccatttgggattcat
gaaccaggtgtcttcatttcaaaggtcattccccgtgggttggcatctcgcagtggactc
cgtgtaggggacaggattctggaagtgaatagtattgacctgcgccatgctacccaccag
gaagcagtgaatgccctactctccaacacccaggagctgactgtgttagtaagacgcgat
ccaccaccacctggtatgcaggaaatatgcattgaaaaggctccaggagagaagctgggc
atcagcatccggggtggagcaaaaggtcatgctggaaatccatttgatcccactgatgaa
ggcatcttcatttctaaggtgagctcctctggggctgctgctcgggatggccgtctgaag
gtgggaatgcggatcctggaggtgaatcatcagagtttgctgggaatgacacatacagaa
gcagtacagatactgcgaagtgtgggtgacacactcttggtgctggtgtgtgatggattt
gatcccaaggctgcagctgccattgagatgtctccaggaattattgcaaacccttttgct
gctggtattgggcggaagaatagcctagaaagtatctcatctattgatcgtgatttaagc
cctgaagaactggagatcctacaaaaggagatggaaatggtgagagaagcaactcagtgg
gagagagaagaaatggagaaagtggctcctgcgagcgagtctgggacaggaatttcccgg
agggaaaccccctattctcctagtaaccagcaggcttccattaatttcattgcatcacag
gatgatagtaaatcaccaaagccaccttcaccaccctctcctgacgagattcccatcaat
gtcaagcaagcatacaagacctttgcagcagtacccttgtcacaccctctgctcgagaca
caggtgctgatgccaagtggactgcacagccccgaacagcgatccttccgtgagaggcag
aagtattttgaagttgaggttaagcagcagcagatggataagcctcccaagcgtgtttct
ttggtaggagaggatgacctgaagaagatgaaggaagaagaagctcgaaagctgcagcag
aaacgtacccttctgttggaagaagaagtggaagaggatgagatgataaaacaagtgcct
gagatgagcatgcagtccagtgtcatcattgaaggagttgagtacaagtttgagaggcta
aatggaaggagcatccagcctccaggaactcggtcctcagaggttaatgagaacaacagt
tcacagaggaattcactggaagaggcaatgaagcctgaacagagaaccaactctatatct
gggttgagtccattaaatcttggagccggggatccagtggcacctgtgcggacagccaaa
gctgaacggcggcaccaggagcgattgcgaatgcagagtcctgagctcctgagcagtcaa
gagaaggagctttctccagcagaacgtcgtgctctggaggcagagaaacgagcaatgtgg
agggcagcacggatgaaatcccttgaacaggatgctcttaaagcccaaatggtcattgcc
aaatccaaggaggggaaaaaacgcagcactctggagcagctggcagagtcaccttcacct
gttcctaccccatcacctacaccactggaagattgcagtcccaggaacgtcacttcaccg
ggaaggctgtcacccgatgcagctgatgacctcagatacatagatgacagaaataactca
gttcctcaggagcaagatgggcagccagatgaagaggaaacgttactaacacatgattca
tcaacacctactgcatcagcacttgaagaaatggctctgtacagcagcaaacgcaaactc
cgacacagccggcgcagtctggagactgctgtcccaacgtag
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integrated database retrieval system
