Cercocebus atys (sooty mangabey): 105573893
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Entry
105573893 CDS
T07242
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105573893 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caty04040
]
105573893 (SCN5A)
Ion channels [BR:
caty04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105573893 (SCN5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
105573893
NCBI-ProteinID:
XP_011889635
Ensembl:
ENSCATG00000002865
LinkDB
All DBs
Position
Unknown
AA seq
1999 aa
AA seq
DB search
MANFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSTTLQESREGLPEEEAPRPQLDLQA
SKKLPDIYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPI
RRAAVKILVHSLFNMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNGTNGSVEADGLV
WESLDLYLSDPENYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEAKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVNSHERRSKRRK
RMSSGTEECGEDRLPKSDSEDGPRAVNHLSLTHGLSRTSVKPRSSRGSIFTFRRRDLGSE
TDFADDENSTAGESESHHTSLLVPWPLRRTSAQGQPSPGTSTPGHALNGKKNSTVDCNGV
VSLLGAGDPEATSPGSHLLRPVMLEHPPDTTTPSEELGGPQMLTPQVPCIDGFEEPGARQ
RALSAVSVLTSALEELEESRRKCPPCWNRLAQRYLIWECCPLWMSIKQGVKLVVMDPFAD
LTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSELRDSDSGLLPRWHMMDFFHAFLIIFRILCGEWI
ETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDREMNNLQ
LALARIQRGLRFVKRTTWDFCCGLLRQRPQKPAALAAQGQLPSCIATPYPPPPPETEKVP
PTRKETRFEEGEQPGQGTPRDPEPVCVPIAVAESDTDDQEEDEENSLDTEEESSKQQESQ
PVSAGPEAPPDSRTWSQVSATASSEAEASVSQADWQQQQRKAEPQAPGCGETQEDSGSEG
STADMTNTAELLEQIPDLGQDVKDPEDCFTEGCVRRCPCCAVDTSQAPGKVWWRLRKTCY
HIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWV
AYGFKKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVN
NKSQCESLNMTGELYWTKATFKGWMDIMYAAVDSRGYEEQPQWEYNLYMYIYFVIFIIFG
SFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKY
QGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKINILAKINLLFVAIFTGECIV
KLAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLI
RGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTF
ANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPTLPNSNGSRGDCGSPAVGILFFTTYII
ISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIWEKFDPEATQFIEYSVLSDF
ADALSEPLRIAKPNQMSLINMDLPMVSGDRIHCMDILFAFTKRVLGESGEMDALKIQMEE
KFMAANPSKISYEPITTTLRRKHEEVSAMVIQRAFRRHLLQRSVKHASFLFRQQTGSSLS
EEDAPEREGLIAYVMNENFSQPLGPASSSSISSTSFPPSYDSVTRATSDNIQVPGSDYSH
SEDVADFPPSPDRDRESIV
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttcctattacctcggggcaccagcagcttccgcaggttcacacgggagtcc
ctggcagccatcgagaagcgcatggcggagaagcaagcccgcggctcaaccactttgcag
gagagccgagaggggctgcctgaggaggaggctccccggccccagctggacctgcaggcc
tccaaaaagctgccagatatctatggcaatccaccccgagagctcatcggagagcccctg
gaggacctggaccccttctatagcacccaaaagactttcatcgtactgaataaaggcaag
accatcttccggttcagtgccaccaacgccttgtatgtcctcagtcccttccaccccatc
cggagagcggctgtgaagattctggttcactcgctcttcaacatgctcatcatgtgcacc
atcctcaccaactgcgtgttcatggcccagcacgaccctccaccctggaccaagtatgtc
gagtacaccttcaccgccatttacacctttgagtctctggtcaagattctggctcgaggc
ttctgcctgcatgcgttcaccttccttcgggacccatggaactggctggacttcagtgtg
attgtcatggcatacacaactgaatttgtggacctgggcaatgtctcagccttacgcacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcagggctgaagaccatcgtg
ggggccctgattcagtctgtgaagaagctggctgatgtgatggtcctcacggtcttctgc
ctcagtgtctttgccctcatcggcctgcagctcttcatgggcaacctaaggcacaagtgc
gtgcgcaacttcacagcgctcaacggcaccaacggctccgtggaggccgatggcttggtg
tgggagtccctggacctttacctcagtgatccagaaaattacctgctcaagaacggcacc
tccgacgtgttgctgtgtgggaacagctctgacgctgggacatgtcccgagggctaccgg
tgcctaaaggcaggcgagaaccctgaccacggctacaccagcttcgattcctttgcctgg
gcctttcttgcactcttccgcctgatgacgcaggactgctgggagcgcctctatcagcag
accctcaggtctgcagggaagatctacatgatcttcttcatgcttgtcatcttcctgggg
tccttctacctggtgaacctgatcctggccgtggtcgccatggcctatgaggagcaaaac
caagccaccatcgctgagaccgaggcgaaggaaaagcgcttccaggaggccatggaaatg
ctcaagaaagaacacgaggcccttaccatcaggggtgtggataccgtgtcccgtagctcc
ttggagatgtcccctttggccccagtaaacagccatgagagaagaagcaagaggagaaaa
cggatgtcttcaggaactgaggagtgtggggaggacaggctccccaagtctgactcagaa
gatggtcccagagcagtgaatcatctcagcctcacccacggcctcagcaggacttctgtg
aagccacgttccagccgcgggagcattttcacctttcgccggcgagacctgggttccgaa
acagattttgcagatgatgaaaacagcacagcgggggagagcgagagccaccacacatca
ctgctggtgccctggcccctgcgccggaccagtgcccagggacagcccagtcctggaacc
tcgactcctggccacgccctcaatggcaaaaagaacagcactgtggactgcaatggagtg
gtctccttactgggggcaggtgacccggaggccacatccccaggaagccacctcctccgc
cctgtgatgctagagcacccaccagacacgaccacaccatcggaggagctaggcgggccc
cagatgctgaccccccaggttccatgtatagatggcttcgaggagccaggagcacggcag
cgggctctcagcgcagtcagtgtcctcaccagcgcactggaagagttagaggagtctcgc
cgcaagtgtccaccatgctggaaccgcctcgcccagcgctacctgatctgggagtgctgc
ccactgtggatgtccatcaagcagggagtgaagttggtggtcatggacccgtttgctgac
ctcaccatcactatgtgcatcgtgctcaacacactcttcatggcgctggagcactacaac
atgacaagtgaattcgaggagatgctgcaggtcggaaacctggtcttcacagggattttc
acagcagagatgaccttcaagatcattgccctcgacccctactactacttccaacagggc
tggaacatcttcgacagcatcatcgtcatccttagcctcatggagctgggcctgtcccgc
atgagcaacttgtcggtgctgcgctccttccgcctgctgcgggtcttcaagctggccaaa
tcgtggcccaccctgaacacactcatcaagatcatcggaaactcagtgggggcactgggg
aacctgacgctggtgctagccatcatcgtgttcatctttgctgtggtgggcatgcaactt
tttggcaagaactactcagagctgagggacagcgactcaggcctgctgcctcgctggcac
atgatggacttcttccatgccttcctcatcatcttccgcatcctctgtggagagtggatc
gagaccatgtgggactgcatggaggtgtctgggcagtcattgtgcctgctggtattcttg
cttgttatggtcattggcaaccttgtggtcctgaatctcttcctggccttgctgctcagc
tccttcagtgcagacaacctcacagcccctgatgaggacagagagatgaacaacctccag
ctggccctggcccgcatccagcggggcctgcgctttgtcaagcggaccacctgggacttc
tgctgtgggctcctgcggcagcggcctcaaaagcccgcagcccttgccgcccagggccag
ctgcccagctgcattgccaccccctaccccccaccacccccagagacagagaaggtgcct
cccacccgcaaggaaacacggtttgaggaaggcgagcagccaggtcagggcacccccagg
gatccagagcctgtgtgtgtgcccatcgctgtggcggagtcagacacagatgaccaggaa
gaggatgaggagaacagcctggacacagaggaggagtccagcaagcagcaggaatcccag
cctgtgtccgctggcccagaggcccctccagattccaggacctggagccaggtgtcagcg
actgcctcctccgaggccgaggccagtgtatctcaggctgactggcagcagcagcagcgg
aaagcggaaccccaggccccagggtgtggtgagacccaagaggacagtggctccgagggc
agcacagcagacatgaccaacaccgctgagctcctggagcagatccctgacctgggccag
gatgtcaaggatccagaggactgcttcaccgaaggctgtgtccggcgctgtccctgctgt
gcggtggacacctcgcaggccccagggaaggtctggtggcggttgcgcaagacctgctac
cacatcgtggagcacagctggttcgagacattcatcatcttcatgatcctgctcagcagt
ggagcgctggccttcgaggacatctacctggaggagcggaagaccatcaaggttctgctt
gagtatgccgacaagatgttcacctatgtcttcgtgctggagatgctgcttaagtgggtg
gcctacggcttcaagaagtacttcaccaatgcctggtgctggctcgacttcctaatcgtg
gatgtctctctggtcagcctggtggccaacaccctgggctttgccgagatgggccccatc
aagtcactgcggacgctgcgtgcactccgccccctgagagctctgtcacgatttgagggc
atgagggtggtggtcaatgccctggtgggcgccatcccgtccatcatgaacgtcctcctc
gtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctcttcgcggggaag
tttgggaggtgcatcaaccagacagagggagacttgcctttgaactacaccattgtgaac
aacaagagccagtgtgagtccctgaacatgaccggagaattatactggaccaaggcaaca
tttaaaggctggatggacattatgtatgcagctgtggactccagggggtatgaagagcag
ccccagtgggaatacaacctctacatgtacatctattttgtcattttcatcatcttcggg
tctttcttcaccctgaacctctttatcggtgtcatcattgacaacttcaaccaacagaag
aaaaagttagggggccaggacatcttcatgacagaggagcagaagaagtactacaatgcc
atgaagaagctgggctccaagaagccccagaagcccatcccacggcccttgaacaagtac
cagggcttcatattcgacattgtgaccaagcaggcctttgatgtcaccatcatgtttctg
atctgcttgaatatggtgaccatgatggtggagacagatgaccaaagtcctgagaaaatc
aacatcttggccaagatcaacctgctctttgtggccatcttcacaggcgagtgtattgtc
aagctggctgccctgcgccactattacttcaccaacagctggaatatcttcgacttcgtg
gttgtcatcctctccatcgtgggcactgtgctctcggacatcatccagaagtacttcttc
tccccgacgctcttccgagtcatccgcctggcccgaatcggccgcatcctcagactcatc
cgaggggccaaggggatccgcacactgctctttgccctcatgatgtccctgcctgcactc
ttcaacatcgggctgctgctcttcctcgtcatgttcatctactccatctttggcatggcc
aacttcgcttatgtcaagtgggaggctggcatcgacgacatgttcaacttccagaccttc
gccaacagcatgctctgcctcttccagatcaccacgtcagccggctgggatggcctcctc
agccccatcctcaacacggggcccccctactgtgaccccactctgccaaacagcaatggc
tctcggggggactgtgggagcccagctgtgggcatcctcttcttcaccacctacatcatc
atctccttcctcatcgtggtcaacatgtacattgccatcatcctggagaacttcagcgtg
gccacggaggagagcaccgagcccctgagtgaggacgacttcgacatgttctatgagatc
tgggagaagtttgacccagaggccactcagtttattgagtattcggtcctgtctgacttt
gccgatgccttgtctgagccactacgtatcgccaagcccaaccagatgagccttatcaac
atggacctgcccatggtgagtggggaccgcatccattgcatggacatcctctttgccttt
accaaaagggttctgggggagtctggggagatggacgccctgaagatccagatggaggag
aagttcatggcagccaacccatccaagatctcctatgagcccatcaccaccacactccgg
cgcaagcacgaggaggtgtcagccatggttatccagagggccttccgcaggcacctgctg
caacgctctgtgaagcatgcctccttcctcttccgtcagcagacgggcagcagcctctcc
gaagaggatgcccctgagcgagagggcctcatcgcctatgtgatgaatgagaacttctcc
cagccccttggcccagcctccagctcctccatctcctccacttccttcccaccctcctat
gacagtgtcactagagccaccagtgataacatccaggtgccgggttctgactacagccac
agcgaagatgtcgccgacttccccccgtctccagacagggaccgtgagtccatcgtgtga
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integrated database retrieval system
