Cercocebus atys (sooty mangabey): 105579443
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Entry
105579443 CDS
T07242
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty04151
PI3K-Akt signaling pathway
caty04510
Focal adhesion
caty04512
ECM-receptor interaction
caty04611
Platelet activation
caty04820
Cytoskeleton in muscle cells
caty04926
Relaxin signaling pathway
caty04933
AGE-RAGE signaling pathway in diabetic complications
caty04974
Protein digestion and absorption
caty05146
Amoebiasis
caty05165
Human papillomavirus infection
caty05205
Proteoglycans in cancer
caty05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105579443 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105579443 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105579443 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105579443 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
105579443 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
105579443 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
105579443 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
105579443 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105579443 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
105579443 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
105579443 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105579443 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caty00536
]
105579443 (COL1A1)
Glycosaminoglycan binding proteins [BR:
caty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105579443 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
105579443
NCBI-ProteinID:
XP_011901567
Ensembl:
ENSCATG00000026514
UniProt:
A0A2K5L756
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGP
MGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGR
PGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQ
MGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGP
RGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP
QGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGL
PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGL
TGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV
PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGE
QGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGS
QGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGD
KGETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGP
PGPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGP
AGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV
VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGA
EGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGP
VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGP
RGPPGSAGTPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSF
LPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCR
DLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKD
KRHVWFGESMTGGFQFEYGGEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQ
TGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPII
DVAPLDVGAPDQEFGFDVGPVCFL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccaatcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc
tgcgtctgcgacaacggcaaggtgttgtgcgatgacgtgatctgtgacgagaccaagaac
tgccccggcgccgaagtccccgagggcgagtgctgtcccgtctgccccgacggctcagaa
tcacccaccgaccaagaaaccaccggcgtcgagggacccaagggagacactggcccccga
ggcccaaggggacccgcaggcccccctggccgagatggcatccctggacagcctggactt
cccggaccccccggaccccccggacctcccggaccccctggcctcggaggaaacttcgct
ccccagttgtcttatggctatgatgagaaatcaaccggaggaatttccgtgcctggtccc
atgggtccctctggtccccgtggtctccctggcccccctggtgcacctggtcctcaaggc
ttccaaggtccccctggtgagcctggcgagcctggagcttcaggtcccatgggtccccga
ggtccccctggcccccctggaaagaacggagatgatggggaagctggaaaacctggtcgt
cctggtgagcgtgggcctcctgggcctcagggtgctcgaggattgcccggaacagctggc
ctccctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgct
ggtcctgctggtcccaagggtgagcctggcagccctggtgaaaatggagctcctggtcag
atgggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggt
gctcgcggaaatgatggtgctactggtgctgccggaccccctggtcctaccggccccgct
ggtcctcctggcttccctggtgctgttggtgctaagggcgaagctggtccccaaggtccc
cgaggctctgaaggtccccagggtgtgcgtggtgagcctggcccccctggccctgctggt
gctgctggccctgctggaaaccctggtgctgatggacagcctggcgctaaaggtgccaat
ggtgctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccc
cagggccccggtggccctcccggtcccaagggtaacagcggtgaacctggtgctcctggc
agcaaaggagacactggtgctaagggagaacccggccccgttggtgttcaaggacctcct
ggccctgctggagaggaaggaaagcgaggagctcgaggtgaacccggacccactggcctg
cccggaccccctggcgagcgtggtggacctggtagccgtggtttccctggtgcagatggt
gttgctggtcccaagggtcccgctggtgaacgtggttctcctggccctgctggccccaaa
ggatctcctggtgaagctggtcgtcccggtgaagctggtctgcctggtgccaagggtctg
actggaagccctggcagccctggtcctgatggcaaaactggcccccctggtcccgccggt
caagatggtcgccccggacccccaggcccccctggtgcccgtggtcaggctggtgtgatg
ggattccctggacctaaaggtgctgctggagagcctggcaaggctggagagcgaggtgtt
cccggaccccctggcgctgtcggtcctgctggcaaagatggagaggctggagctcaggga
ccccctggccctgctggtcccgctggcgagagaggtgaacaaggccctgctggctccccc
ggcttccagggtctccctggccccgctggtcctcccggtgaagcaggcaaacctggtgaa
cagggtgttcctggagaccttggtgcccccggcccctctggagcaagaggcgagagagga
ttccctggcgagcgtggtgtgcaaggtccccctggtcctgctggtccccgaggggccaat
ggtgctcccggcaatgatggtgctaagggtgatgctggtgcccctggagctcccggtagc
cagggcgcccctggccttcagggaatgcctggtgaacgtggtgcagctggtcttccaggg
cctaagggtgacagaggtgatgctggtcccaaaggtgctgatggctctcctggcaaagat
ggcgtccgtggtctgactggccccattggtcctcctggtcctgctggtgcccctggtgac
aagggtgaaactggtcccagcggccctgctggtcccactggagctcgtggtgcccccgga
gaccgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgat
ggccaacccggtgctaaaggcgaacctggtgatgctggtgctaaaggcgatgctggtccc
cctggccctgccggacccgctggaccccctggccccattggtaatgttggtgctcctgga
cccaaaggtgctcgtggcagcgctggtccccctggtgctactggtttccctggtgctgct
ggccgagtcggtcctcctggcccctctggaaatgctggaccccctggccctcctggtcct
gctggcaaagaaggtggcaaaggtccccgtggtgagactggccctgctggacgtcctggt
gaagttggtccccctggtccccctggccccgctggcgagaaaggatcccctggtgctgat
gggcctgctggtgctcctggtactcccgggcctcaaggtattgctggacagcgtggcgtg
gtcggcctgcctggtcagagaggagaaagaggcttccctggtcttcctggcccctctggt
gaacctggcaaacaaggtccctctggagcaagtggtgaacgtggtccccctggtcccatg
ggcccccctggattggccggaccccctggtgaatctggacgtgagggagctcctggtgcc
gaaggttcccctggacgagatggttctcctggccccaagggtgaccgtggtgagactggc
cccgctggacctcctggtgctcctggtgctcctggtgcccctggccccgttggccctgct
ggcaagagtggtgatcgtggtgagactggtcctgccggtcccgctggtcctgtcggccct
gttggcgcccgtggccccgctggaccccaaggcccccgtggtgacaagggtgagacaggc
gaacaaggcgacagaggcataaagggtcaccgtggcttctctggcctccagggtccccct
ggccctcctggctctcctggcgaacaaggtccctctggagcctctggtcctgctggtccc
cgaggtccccctggctctgctggtactcctggcaaagatggactcaacggcctccctggc
cccattgggccccctggtcctcgcggtcgcactggtgatgctggtcctgttggtcccccc
ggccctcctggccctcccggtccccctggtcctcccagcggtggtttcgacttcagcttc
ctgccccagccacctcaagagaaggctcacgatggcggccgctactaccgggctgatgat
gccaatgtggttcgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccag
cagatcgagaacatccggagccccgagggcagccgcaagaaccccgcccgcacctgccgc
gacctcaagatgtgccactctgactggaagagcggagagtactggattgaccccaaccaa
ggctgcaacctggatgccatcaaagtcttctgcaacatggagactggtgagacctgcgtg
taccccactcagcccagtgtggcccagaagaactggtacatcagcaagaaccccaaggac
aagaggcacgtctggttcggcgagagcatgaccggcggattccagttcgagtatggcggc
gagggctccgaccctgccgacgtggccatccagctgaccttcctgcgcctgatgtccacc
gaggcctcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcag
actggcaacctcaagaaggccctgctcctccagggctccaacgagatcgagatccgcgcc
gagggcaacagtcgcttcacctacagcgtcactgtcgatggctgcacgagtcacaccgga
gcctggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatc
gatgtggcccccttggacgttggtgccccagaccaggaattcggcttcgacgttggccct
gtctgcttcctgtaa
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