Cercocebus atys (sooty mangabey): 105584910
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Entry
105584910 CDS
T07242
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty04151
PI3K-Akt signaling pathway
caty04510
Focal adhesion
caty04512
ECM-receptor interaction
caty04820
Cytoskeleton in muscle cells
caty04926
Relaxin signaling pathway
caty04933
AGE-RAGE signaling pathway in diabetic complications
caty04974
Protein digestion and absorption
caty05146
Amoebiasis
caty05165
Human papillomavirus infection
caty05200
Pathways in cancer
caty05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105584910 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105584910 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105584910 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105584910 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
105584910 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
105584910 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105584910 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
105584910 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105584910 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
105584910 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105584910 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caty04147
]
105584910 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
caty00536
]
105584910 (COL4A1)
Exosome [BR:
caty04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105584910 (COL4A1)
Glycosaminoglycan binding proteins [BR:
caty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105584910 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105584910
NCBI-ProteinID:
XP_011913415
Ensembl:
ENSCATG00000031204
UniProt:
A0A2K5LN90
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGPRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGL
PGNPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGRPGPRGKPGKDGDKGEKGS
PGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP
KGFPGLPGQPGPPGPPLPGQAGAPGFPGERGEKGDRGFPGASLPGPSGRDGLPGPPGSPG
PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGLIGEIGEKGQKGESCLICDTTGYRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEIYFDLRLK
GDKGDPGFPGQPGMPGRAGSPGRDGHAGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGYGPTGPIGDKGQAGFPGGPGSPGLPGPKGEPGKVVPLPGPPGAEGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNG
LPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGIPGEHGAIGPPGLQGI
RGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPG
PKGDKGSQGLPGVTGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPG
LPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGSPGLPGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGE
KGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPSGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPG
IDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKG
VPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLQGPPGPK
GQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPTGPTGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcagcgtctggctgctgctgctgcccgccgcccttctgctccacgag
gagcacagccgggccgctgcgaagggtggctgtgctggctctggctgtggcaaatgtgac
tgccatggagtgaagggacaaaagggcgaaagaggccttccagggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgat
actggagaaccaggactacctggaacaaaagggacaagaggacccccgggagcatctggc
taccctggaaacccgggacttcccggtattcctggccaagacggcccaccaggcccccca
ggtattccaggatgcaatggcacaaagggggagagagggccactcgggcctcctggcttg
cctggtttcgctggaaatcccggaccaccagggttaccaggaatgaagggtgatccaggt
gagatacttggccatgtgcccgggatgctgttgaaaggtgaaagaggatttcccggactc
ccagggaatccaggcccaccaggactgccagggcttcaaggtcctgttgggcctccagga
tttaccggaccaccgggtcccccaggtcctcctggccctccaggtgaaaagggacaaatg
ggcttaagttttcaaggacccaaaggtgacaagggtgaccaaggggtcagtgggcctccg
ggagtaccaggacaagctcaagttcaagaaaaaggagattttgccaccaagggagaaaag
ggccaaaaaggtgaacctggatttcagggaatgccaggggtcggagagaaaggtgaaccc
ggaagaccaggacccagaggaaaacctggaaaagatggtgacaaaggggaaaaagggagc
cccggttttcctggtgaacccgggtacccaggactcgtaggccgccagggcccgcaggga
gaaaagggtgaagcaggtcctcccggcccacctggaattgttataggcacaggacctttg
ggagaaaaaggagagcggggctaccctggaactccagggccaagaggagagccaggccca
aaaggtttcccaggactaccaggccaacctggacctccaggcccccctctacctgggcag
gctggtgccccaggcttccctggtgaaagaggagaaaaaggtgaccgaggatttccgggt
gcctctctgccaggaccaagtggaagagacgggctcccgggtcctcctggttcccccggg
ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt
gaccagggtcctcctggaattccagggcagccaggattgataggcgaaattggagagaaa
ggtcaaaaaggagagagttgcctcatctgtgatacaaccgggtatcgggggcctcccggg
ccacagggacccccaggagaaataggtttcccaggacagccaggggccaagggcgacaga
ggtttgcctggcagagacggtgttgcaggagtgcctgggcctcaaggtacaccagggctg
atcggccagccaggagccaagggggagcctggtgagatttatttcgacctgcggctcaaa
ggtgacaaaggagacccaggctttccaggacagcccggcatgccagggagagcgggttct
cctggaagagatggccatgcgggtcttcctggccccaagggctcgccgggttctgtagga
ttgaaaggagagcgtggtccccctggaggagttggattcccaggcagtcgtggtgacacc
ggcccccctgggcctccaggatatggtcctactggtcccattggtgacaaaggacaagca
ggctttcctggaggccctgggtccccaggcctgccaggtccaaagggtgaaccaggaaaa
gttgttcctttaccaggcccccctggagcagaaggactgccggggtccccaggcttccca
ggtccccaaggagaccgaggctttcctggaaccccaggaaggccaggcctgccaggagag
aagggtgctgtgggccagccaggaattggatttccagggccccccggccccaaaggtgtt
gatggcttacctggagacatggggcctccagggactccaggtcgcccgggatttaatggc
ttacctgggaacccaggtgtgcagggccagaagggagagcctggagttggtctaccggga
ctcaaaggtttgccaggtcttcctggcattcctggcacacccggggagaaggggagcatt
ggggtaccaggtattcctggagaacacggagcgattggaccccctgggcttcaagggatc
agaggtgaaccggggcctcctggattgccaggctccgtggggtctccaggagttccagga
atcggcccccctggagctaggggcccccctggaggacagggaccaccggggttgtcgggc
cctcctggaataaaaggagagaagggtttccccggattccccggactggacatgccaggc
cctaaaggagataaagggtctcaaggacttcctggcgtaacaggacagtccgggctccct
ggccttcctggacagcaggggtctcctgggattcctgggtttccaggttccaagggagaa
atgggcgtcatggggacccccgggcaaccgggctcaccaggaccagtgggtgttccggga
ttaccgggtgaaaaaggggaccatggcttcccgggctcctcaggacccaggggagaccct
ggcctgaaaggtgataagggggatgtcggtctccctggcaagcctggctccatggataag
gtggacatgggcagcatgaagggccagaagggagaccaaggagagaaaggacaaattgga
ccaattggtgagaaaggatcccgaggagaccctgggaccccgggagtacctggaaaggat
gggcaggcaggacagcctgggcagccaggacctaaaggtgatccaggtataagtggaacc
ccaggtgctccaggacttccgggaccaaaaggatctgttggtggaatgggcttgccagga
acacctggagagaaaggtgtgcctggcatccctggcccacaaggttcacctggcttacct
ggagaaaaaggtgcaaaaggagcgaaagggcaggcaggcccacctggcataggcatccca
gggctgcctggtgaaaagggagatcaagggatagcgggtttcccaggaagccctggagag
aagggagaaaaaggaagcattgggatcccaggaatgccagggtccccaggccttaaaggg
tctcctgggagtgttggctatccagggagccctgggctgcccggagaaaaaggtgacaaa
ggcctcccaggattggatggcatccctggtgtcaaaggagaagcaggtcttcctgggacg
cctggcccctcaggcccagctggccagaaaggggagccaggcagtgacggaatcccaggc
tcagcaggagagaagggtgaaccaggtctaccaggaagaggattcccagggtttccaggg
gccaaaggagacaaaggttcaaagggtgaggtgggtttcccaggattagctgggagccca
ggaattcctggatccaaaggagagcaaggattcatgggtcctccagggccccagggacag
ccggggttaccaggatccccaggccatgccacggaggggcccaaaggagaccgtggacct
cagggccagcctggcttgccaggacttccgggacccatggggcctccagggcttcctggg
attgatggagttaaaggtgacaaaggaaatccaggctggccaggagcacccggtgtccca
gggcccaagggagaccctggattccagggcatgcctggcattggtggctctccaggaatc
acaggctctaagggtgatatggggcctccaggagttccaggatttcaaggtccaaaaggt
gttcctggcctccagggaattaaaggtgatcaaggcgatcaaggtgtcccgggagctaaa
ggtctcccgggtcctcctggccccccaggtccttacgacatcatcaaaggggagcccggg
ctccctggtcctgagggccccgcagggctgaaagggcttcagggacctccaggccccaaa
ggccagcaaggtgttacaggattggtgggtatacctggacctccaggtattcctgggttc
gacggtgcccctggccagaaaggagagatgggacctaccgggcctactggtccaagagga
tttccaggtccaccaggccccgatgggttgccagggtccatggggcccccaggcacccca
tctgttgatcacggcttccttgtgaccaggcacagtcaaacaatagatgacccacagtgt
ccttctgggaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaacgaa
cgggcccatggccaggacttgggcacggccggcagctgcctgcgcaagttcagcacaatg
cccttcctgttctgcaacattaacaacgtgtgcaactttgcatcacgaaatgactactca
tactggctgtccacccccgagcccatgcccatgtcaatggcacccatcacgggggacaac
ataagaccctttattagtaggtgtgctgtgtgtgaggcgcccgccatggtgatggccgtg
cacagtcagaccattcagatcccaccgtgccccagcgggtggtcctcgctgtggatcggc
tactcttttgtgatgcacaccagcgctggtgcagaaggctctggccaagccctggcgtcc
cctggctcctgtctggaggagtttagaagtgcgccattcatcgagtgtcacggccgtggg
acctgtaattactacgcaaatgcttacagcttttggctcgccaccatagagaggagcgag
atgttcaagaaacccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc
cgctgccaagtctgtatgagaagaacataa
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integrated database retrieval system
