Carassius auratus (goldfish): 113055245
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Entry
113055245 CDS
T07313
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113055245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113055245
03036 Chromosome and associated proteins [BR:
caua03036
]
113055245
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113055245
Coactivators
SAGA/TFTC/STAGA complex
113055245
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113055245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Beta-Casp
AAA_23
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
113055245
NCBI-ProteinID:
XP_026077155
UniProt:
A0A6P6KXZ8
LinkDB
All DBs
Position
36:11401724..11414772
Genome browser
AA seq
819 aa
AA seq
DB search
MVTTLIGTSTVQTLNGGNAMDPHTESGTPVSSGPSSSSPNDASASVSVVNNGPGVAKGLG
NVAVAPNPNTVIQSSYGNPPAAASSAGPSVTVVRTSMQTAGTGLTINGSNNNSVSATVAN
VATPGITTTATTTSTTTTTPVLMNQTPASVPASKSEATKTIIQPAGTMTLGPAVAKGAVL
QGVSRTAAPATVAAAAGSSPVIRAIAPQVLAPRLPQSTPGQNIQNIQLPPGMVLVRSDSG
QLLMIPQQMLAQMQAQSQAARPAAPSSTTPGQITSAQAPGTPLIARQVTPTSIIKQGSPT
ASSTATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTAATGTTVSSATETMENVKKCRNFL
STLIKLATSGKQSSETVANVKELVKNLLEGAIEAEEFTSRLYKELNSSPQPYLVPFLKRS
LPALRQLTPDSTAFIQQSQALQAPAVVLTSTNTTGATATAPRTLIQPALSNSSQTASLVL
QSPQQGAIVKPPQVTLTTTPMVTLRGQPHGHIVVGQPQVQLKQIQTVAVKQGVVSSTKLA
PGSMSIALAQKNKAKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVTRS
CKDEAFLSASMLQHKILEIGQRFGVKELGPEVVNFVSHATQQRLQNLLEKVSLIAQQKNM
TYKEDSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQ
KAKEMQQQELAQIRQREANLTALAAIGPRKKRKLDSPSLVTDAEGSGLCVSASGGLNAGA
SRQYTRQRITRVNLRDLLFCLENERSTSHSQLLYRALLK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgatcgggacgtccacagtgcaaactttgaacggaggcaatgcaatg
gatccgcacactgaaagcggcactccagtgtccagtggcccatcatcatcatcaccgaac
gacgcttcagcctctgtctcagttgttaataacgggcccggggtggcgaaaggactcgga
aacgtcgctgtcgccccaaacccaaacacagtgatacagtcttcatatgggaatcctcca
gcggcggcatccagtgcaggaccctctgtgacagttgtcaggacatctatgcaaactgct
ggaacaggtttaactattaacgggagtaataataactcagtttcggcgactgtagccaat
gtagcgaccccgggaataactactactgctactactacttctactactacgacgacccct
gttttgatgaaccagactcctgcttctgtcccagcgagtaagtccgaggctacaaaaact
attatccagcccgctggcaccatgactctcggccctgcagtggccaaaggggctgttttg
caaggggtttcgagaactgcagctccggcaactgttgcagcagcagcgggatcgagccct
gtcatcagggccatcgcgccacaggtgttagcgccccgactccctcagagcaccccggga
cagaacatccagaatatccagctacctccagggatggtattggtgcgtagtgacagtggt
cagttactgatgatcccacagcagatgttggcacagatgcaggcccagtctcaggccgcc
cgccctgctgcccccagcagcaccacccctgggcagatcacctctgcacaggcacctgga
actcctctaattgcccgacaggtgactcctaccagcatcataaagcagggctctcctaca
gccagcagcacggccactaccacactccagagaccacctgtacagcaggcttcctctgtg
ggtgccgtgttgtcagtgcaggcagggaccgcccagaggactgtgactgctgccacgggg
accactgtctcctcggcaacggagacgatggagaatgttaagaaatgtaggaacttcttg
tctacgctgataaagctggccactagcggtaaacagtcatcagagactgtcgccaacgtt
aaagagctggtcaagaacctgctggaaggagcgattgaagcagaggagttcaccagcaga
ctctacaaagagctcaactcctctcctcagccttatctagtgcctttccttaagaggagt
ctcccagctctgagacagctcactcctgactccacggccttcatccagcagagccaggcc
cttcaggcgcccgctgtggtgctaaccagcaccaacaccactggtgccaccgccacagcc
cctcgcacgctcatccagcccgccctcagcaactccagccagactgcctctctggtgttg
cagtccccacagcagggggcaatagtgaagccccctcaggttaccctgacgaccactccc
atggtgactctcaggggtcaaccccatggccacatagtggtgggtcagcctcaggtgcag
ctcaaacagatccagacagtcgctgtgaagcagggtgttgtgagtagcactaaactggct
ccgggctccatgtctatagcgttggctcagaagaataaagcgaaggatggtgctggagga
actttcagggatgatgacgacattaatgacgtggcctcaatggcaggcgttaatctttcg
gaggagagcgctcgtatcctggccaccaactcggagctggttggtgcagtcacgcggtct
tgtaaggatgaagctttcctctccgccagcatgctacagcacaagatactagagataggc
cagaggtttggagtgaaggagctgggtcccgaggtcgtgaacttcgtctctcatgccact
caacagagactgcaaaaccttctagagaaggtctcattgatcgcccagcaaaagaacatg
acttacaaggaggatagtcggtacgagcaggtggaggatgttcgctctcagctgaagttc
tttgagcaacttgaccagttggagaaacaaaagaaagaagaacaggagagagaaatttta
atgaaagcagctaagtcacgctcacgacaagaggatcccgagcagctgcggctgaaacag
aaggccaaagagatgcagcagcaggaattggctcagattcgtcaaagagaagccaacttg
acggcgttggcagctattggacctagaaagaagagaaaactggattctccttcactcgtg
actgacgcagagggctcaggtttgtgcgtgagtgcatccgggggcttaaatgcaggagcg
tcgaggcagtacactcgccagcgcatcacgcgtgtaaacctcagggatctgctcttctgt
ctagagaacgagagaagcaccagccactcacaactgctctaccgagcccttctcaaatag
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