Carassius auratus (goldfish): 113061680
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Entry
113061680 CDS
T07313
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113061680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113061680
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113061680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113061680
NCBI-ProteinID:
XP_026086787
Ensembl:
ENSCARG00000068451
UniProt:
A0A6P6LSL2
LinkDB
All DBs
Position
43:10651120..10653980
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AA seq
233 aa
AA seq
DB search
MTRMSATRGLCMRTMMELDQSCSVLREYGSEQSLLSKPDGSSTFVQGDTSILAGVYGPAE
VKVSKEIYDRATVEVLIQPKMGLPGVRERAREQCVRETCEAALLLTLHPRSSVTVVLQVI
HDDGSLLSCCLNAACMALMDAGLPMSHLFCGVTCAISKEGQIIIDPTARQEKECRALLTF
AIDSAECNVLISSTTGSFSVQELQQCIAISQKASEQIFQFYRDSVKRRYSKIQ
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtatgagtgcgacgagaggattgtgcatgaggaccatgatggagttggatcaa
agttgttcagttttaagagaatatggaagtgagcagagtttgttatcaaagcctgacgga
tcttccacctttgttcaaggtgatactagtatcctggctggagtttatggaccagctgag
gttaaagtcagtaaggaaatctatgaccgagctactgtagaggttcttattcagcctaaa
atggggcttccaggagtgcgcgagcgcgcgagagagcagtgtgttcgtgagacgtgcgag
gccgcgcttctgctgacgcttcatcctcgttcttctgtcacagtcgtcctgcaggtcatc
cacgatgatggctctctgctgtcgtgctgtctgaatgctgcctgcatggctctaatggat
gccgggctgcccatgagccaccttttttgtggtgtgacctgtgctattagcaaagaaggc
cagataatcattgatcccacggctcggcaggagaaggaatgtcgagcgttgttaacgttt
gctattgatagcgctgagtgtaatgtcttgatatcatcaaccacaggctctttttcagtc
caggagctgcagcagtgcatcgcaatcagtcaaaaggcttctgaacaaatcttccagttt
tatagggattcggtcaaacggcgatattcaaagatacaataa
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