Clostridium felsineum DSM 793: CLAUR_038250
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Entry
CLAUR_038250 CDS
T08241
Symbol
recD2_2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
caun
Clostridium felsineum DSM 793
Pathway
caun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLAUR_038250 (recD2_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caun03400
]
CLAUR_038250 (recD2_2)
Enzymes [BR:
caun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLAUR_038250 (recD2_2)
DNA repair and recombination proteins [BR:
caun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLAUR_038250 (recD2_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_4
AAA_30
AAA_19
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PhoH
PIF1
SLFN-g3_helicase
AAA_23
UvrD_C
nSTAND3
AAA_22
AAA_28
HHH_2
AAA
UvrD-helicase
DNA_pol_lambd_f
SMC_N
DUF575
HerA_C
DUF6452
AAA_16
AAA_29
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
URZ03760
UniProt:
A0A1S8M7N6
LinkDB
All DBs
Position
4189871..4192084
Genome browser
AA seq
737 aa
AA seq
DB search
MLELHCVVDTVVFKNEENGYVVANAKSKEEDKITIVGCIPYVMEGQSLKVSGEWIVHPQF
GKQFKIERCEEILPNSLLGIEKYLASGIIAGIGPVTAQKIVNKFGEQTLEILDNDIYRLS
EIEGIGKKKIDKIYETYSEQREVRNIMIFLQNYGVTPKQCVKIYNHYKAKAIEVVKQNPY
ILVEEISGIGFKTADKIARSLGIEGNSPFRIQSGVSYVINEFCMLGNTYMPMEKLIKNCM
EVLNVKKDEVEKAVYECTLSQRIKVEIINGENCVFTMEYYYCEIGITRKIVTLAYDSYKS
LDINVDEKIKQFENENGIKFAPSQIEAIEGAFLNGIEVITGGPGTGKTTIIRCITYIFEE
LNMKVFMAAPTGRAAKRMSESTGREAKTIHRLLEIGYEDEVFLDNNNDSTLQCDVVIIDE
ASMIDIVLMNSLLKSIGMGTRVIIVGDVDQLPSVGPGNVLRDIIESKCVKVVRLADIFRQ
SKESMIIVNAHKINNGEMPLLNRKDKDFYFIKEDNAEGITNTIISLVYERLPKFNKKWNA
VRDIQVLSPMKRGTAGVINLNTNLQSIINPPHKNKPEIKFRDNIFRVGDKVMQIKNNYML
KWNRITGEGEKSGEGVFNGDIGVVNDIDEDNNVIVIFDDEKEVTYERINLDELELAYAVT
IHKSQGSEFPVVILPMTMGPPLLMNRNLLYTGITRAKQLVVIVGFPKAIKFMIDNDKSFE
RYSGLKWRIEDIIKEES
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacttcattgtgttgtcgacactgttgtgtttaaaaatgaagagaatgggtat
gtagttgctaatgccaagtcaaaagaagaggataaaattacaatagttgggtgtataccc
tatgttatggaaggccaatctttaaaggtttcaggagaatggattgttcatcctcagttt
ggaaaacagtttaaaatagaacgttgtgaggaaattctacccaattcgttattaggtata
gaaaaatatctagcatcaggaattattgctggaataggaccagtaacagcccaaaaaata
gtaaacaaatttggagaacaaacgcttgaaatattagataatgatatatatagattaagc
gaaatagagggaataggtaaaaagaaaatagataagatatatgagacttattctgaacaa
agagaagtaagaaatataatgatttttcttcaaaattatggagtaacgcccaaacaatgt
gtaaaaatatataatcattataaagcaaaggctatagaagtagtgaaacaaaatccatat
atacttgttgaagaaatatctggaataggatttaaaacagcagataaaatagctagaagt
cttggaatagaaggaaattctccatttagaattcaaagtggtgtatcttatgtgataaat
gaattttgtatgttaggtaatacatatatgccaatggaaaagcttataaaaaattgcatg
gaagtactaaatgtaaaaaaagatgaagtagaaaaagcagtatatgaatgtacactttct
caaagaataaaagtggaaataataaatggcgaaaattgcgtttttactatggaatactat
tattgtgaaataggtataacaagaaaaatagtaacacttgcttatgacagttataaaagt
ctagatataaatgtagatgaaaaaataaaacaatttgaaaatgaaaatggaataaagttt
gcaccatctcaaattgaggccattgagggagcgtttttaaacggaatagaagttataaca
ggaggtcctggaactggaaaaacaacgataataagatgtataacttatatatttgaagaa
ttaaacatgaaggtatttatggctgcaccgacaggaagagccgcaaaaagaatgtcagaa
tcaacaggtagggaagctaaaactattcataggttactggagattggttatgaagatgag
gtgtttctagataacaataatgacagtacacttcaatgtgatgttgtaataatagatgaa
gcatcaatgattgatattgtcttgatgaatagtcttttaaaatcaataggtatgggaact
agggttataatagttggagatgtagatcaacttccatctgttggaccaggaaatgttctt
agagatataattgagagtaaatgtgtaaaagttgttagattagcagatatatttagacaa
tctaaggaaagtatgattatagtaaatgctcataaaattaacaatggtgaaatgccactt
ttgaataggaaggataaggacttttattttataaaagaagataatgcagaaggtataact
aatactataattagtttagtatatgaaaggcttcctaagtttaataagaaatggaatgct
gtaagagacatacaagtactttcgcccatgaaaagaggtactgcaggggtaataaattta
aatactaatttacagagcattataaatccacctcataaaaataaacctgaaattaaattt
cgtgacaatatttttagggttggagacaaagttatgcagataaagaataactatatgtta
aagtggaataggataacaggcgaaggggaaaagtctggagaaggagtttttaatggagat
ataggagttgtcaatgatatagatgaagataataatgttatagttatttttgatgatgaa
aaagaagttacatatgaaagaattaatttagatgaattagaacttgcatatgcagtaacc
attcacaaaagccaaggaagtgaatttccagtagtaattcttccaatgacaatgggacca
cccctacttatgaatagaaatcttttgtatactggaattacaagagctaagcagttagtt
gtaatagttgggtttcctaaagctattaaatttatgatagataatgataaaagctttgaa
agatattcaggacttaaatggagaattgaagatataataaaagaagagagttag
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