Candida auris: CJI96_0002604
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Entry
CJI96_0002604 CDS
T04850
Name
(RefSeq) Sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
caur
Candida auris
Pathway
caur03018
RNA degradation
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0002604
09123 Folding, sorting and degradation
03018 RNA degradation
CJI96_0002604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0002604
03041 Spliceosome [BR:
caur03041
]
CJI96_0002604
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CJI96_0002604
mRNA degradation factors
5'-3' decay
Lsm complex
CJI96_0002604
Spliceosome [BR:
caur03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CJI96_0002604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
40029290
NCBI-ProteinID:
XP_028891357
LinkDB
All DBs
Position
2:complement(2504996..2505436)
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AA seq
146 aa
AA seq
DB search
MSQRQRRDKDSRGHRDRNDRGDRNERGDRSDRNDRGDRGNRSTYMSRQERPKKEAIVDLN
KFQDQKVVVKFIGGRQVVGVLKGFDQLMNLVLEDVTETLRDPEDDAILTEKRRDFKVVVV
RGPSLLTLSPLEGTESIENPFNIEQQ
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagacagcgtcgagacaaggacagcaggggccacagagacagaaacgatagg
ggcgatagaaacgagcgtggtgatcgtagcgacagaaatgatagaggcgacagaggcaac
cgtctgacgtatatgagcagacaggagagacccaaaaaggaggccattgtcgacttgaac
aagtttcaagatcagaaggttgtggtcaagttcattggtggaagacaagttgtgggtgtg
ttgaagggatttgaccaattgatgaacttggttttggaagatgtcaccgaaacgctcaga
gaccctgaggacgatgccatcttgacagaaaaaagaagagacttcaaagtggtcgtggta
aggggcccgctgttgttgaccctttcgccgcttgaaggaacagagagcattgaaaaccca
ttcaatatcgagcagcagtaa
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