Corylus avellana (European hazelnut): 132163530
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Entry
132163530 CDS
T09426
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132163530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132163530
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
132163530
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GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
132163530
NCBI-ProteinID:
XP_059429831
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Position
ca10:complement(6903944..6917237)
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AA seq
960 aa
AA seq
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MAPIPSENGVEGDDEREEEDEEEEEEEEDEEQAEEEEEEEEEPRLKYQRMGGSIPALLAS
DAASCIAVAERMIALGTQGGTVHILDFLGNQVKEFLAHTAAVNDLSFDLEGEYVGSCSDD
GSVVINSLFTDEKMKFEYHRPMKAIALDPEYARKMSRRFVAGGLAGHLYYNTKKWLGYRD
QVLHSGEGPIHAVKWRTSLIAWANDAGVKVYDTANDQRITFIERPRGIPRPELLVPHLVW
QDDTLLVIGWGTSVKIASIRSNQNGATNGTYRHVPMSSMNKVDIVASFQTSYFISGVAPF
GDSLVVLAYIPGEEDGEKEFSSTIPSRQGNAQRPEVRIVSWSNDELSTDALPVHGFEHYK
AKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLQHGWHEK
ALAAVEAGQGRSELLDEVGSGYLDHLIVERKYAQAASLCPKLLRGSASAWERWVFHFAHL
RQLPVLVPYIPTENPRLRDTAYEVALVALATNPSFHEALLSTVKSWPHVMYSALPVISAI
EPQLNTSSMTNALKEALAQLYVIDGQYEKAFSIYADLMKPEVFDFIEKYNLHDAIREKVV
QLMMIDCKHAVPLLIQNKDLITPSEVVSQLQNASNKCDHRYFLHLYLHSLFEVNPHAGKD
FHDVQVDLYAEYDPKMLLPFLRSSQHYTLEKAYEICVRRDLLREQVFILGRMGNSKQALS
VIINNLGDIEEAVEFVTMQHDDDLWEELIRQCLDKPEMVGLLLEHTVGNLDPLYIVNIVP
NGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARHGIYLSNEEDE
ARTKRNDSVASQAIEKSSSVRTMEVKSKTSGGARCCMCFDPFSIQNVSVIVFFCCHAYHK
TCLMDSMYNISGKKGSGATSREPVVEYEYGNGDIDDDDSDDDSQSSAYHMRCILCTTAAG
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggctccgattccctcagagaacggcgtcgagggagacgacgagagagaagaggaggac
gaagaagaagaggaagaagaggaggatgaagaacaggcggaggaggaggaggaggaggaa
gaggagccgaggctcaagtaccagagaatggggggcagcatacctgcgctgctggcgagc
gatgcggcgtcgtgtatcgccgtcgcggagcgcatgatcgcgctcgggacccagggaggc
accgtccacatcctcgattttcttgggaaccaggtgaaggaattccttgctcatactgct
gctgtcaatgatcttagctttgatctagaaggtgaatatgtaggaagctgttctgatgat
gggtctgttgttataaacagccttttcactgacgagaaaatgaagtttgagtatcatcgc
ccgatgaaggctattgctctggacccagagtatgcaagaaaaatgtcaagaagatttgta
gctggtggtttagctggtcatttatattacaataccaagaaatggcttggctatcgtgac
caggtcttgcattctggtgaaggtccaattcatgcagtgaagtggagaacaagtctcatt
gcttgggctaatgatgcaggtgtgaaagtttatgacactgccaatgatcaacgtataaca
tttattgaaagaccaagaggaatcccacgtcctgagcttttagttcctcacttagtttgg
caggatgacactcttttggtgattggctggggaacatctgtaaaaattgcatcaataaga
tcaaatcagaatggagcaactaatgggacatatagacatgttccaatgtcaagtatgaac
aaggtggatattgtggcatctttccaaaccagctatttcatttcaggagttgctccattt
ggtgattctttggttgttttagcatatattcctggggaagaagatggggagaaggaattt
agtagcaccattccatcacggcagggaaatgcacagaggccagaagtacgtatagtatcg
tggagtaatgatgaactttcaacagatgctctacctgttcatggctttgagcattacaag
gcaaaggactattcccttgctcatgctcctttctcaggtagcagctatgctggtggtcag
tgggcagcaggtgatgaaccactgtactatattgtatccccaaaggatgtcgttattgcc
aaacctagggatgccgaagatcatattgcttggctactgcaacatgggtggcatgaaaaa
gctttggcagctgtggaagccggtcaagggcggagtgaactccttgacgaggtgggatct
ggataccttgatcatttgattgtggaaaggaagtatgctcaagctgcatctttgtgtcct
aaattgttgcggggatctgcttcagcatgggaaagatgggttttccactttgctcatctc
cgtcagcttccagtgttggtcccatacataccaacagaaaacccaagactgcgtgatact
gcttatgaggttgctcttgtagctttggctacaaatccttctttccatgaggccctcttg
tcaactgtcaaatcttggccacatgtgatgtattctgcattgcctgttatttcggccata
gaacctcagctcaatacttcatccatgactaatgcgctcaaagaggcactagcacagttg
tatgtaatagatgggcaatatgagaaagctttttcgatctatgctgatcttatgaagcca
gaagtattcgacttcatcgaaaaatataacttgcacgatgcaattcgggaaaaggttgtg
caactgatgatgatagattgcaagcatgcagttccattattgatccaaaataaggacttg
attactccatctgaagttgtttcacaacttcaaaatgccagcaataagtgtgatcacaga
tatttcctgcatctatatctccattcattattcgaagtgaatccacacgctggaaaggat
tttcatgatgtgcaggtggacctttatgcagaatatgatccaaagatgctacttcctttt
cttcgtagtagtcaacattatacgcttgaaaaggcatatgaaatttgcgtcagaagagat
cttctaagggagcaagtcttcatccttggaagaatgggaaattctaaacaagccctatct
gtcattataaataacttgggggatatagaggaggctgtagagtttgtgactatgcagcat
gatgatgatctttgggaagagttaataaggcaatgtcttgacaaacctgaaatggtgggt
ttgttgttggagcacacagttggaaatcttgatcctctctatattgtaaatattgttccc
aatggtttggagatacctcggcttagggatcggctggtcaagatcattactgattacagg
actgaaacatctcttagacatggttgcaatgatatcctcaaggctgattgtgtcaacctc
ttggttaaatactacaaagaggcgaggcacgggatatacttgagcaatgaagaagatgaa
gcacgaacaaaaaggaacgacagtgtggcttctcaggcgattgagaaatcatctagtgtg
aggaccatggaggttaagtctaaaaccagtgggggtgcaaggtgttgcatgtgttttgat
ccgttttccatacaaaatgtatcagtcatcgttttcttttgctgtcatgcgtatcacaag
acgtgtcttatggattctatgtataatattagtggcaagaaagggtctggagccacttcc
cgagagcctgtagtagagtatgagtatggtaatggtgatatagacgatgacgacagcgac
gatgattcccagtcaagtgcatatcatatgcgttgtatcttatgtactacagctgccggt
tga
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