Corylus avellana (European hazelnut): 132180567
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Entry
132180567 CDS
T09426
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
cave
Corylus avellana (European hazelnut)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-GeneID:
132180567
NCBI-ProteinID:
XP_059449422
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All DBs
Position
ca5:complement(29608127..29621395)
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AA seq
1455 aa
AA seq
DB search
MASSQSSKTLTLDSSHLFLTALQSLAQQQTLPPPPPLSPPLPLPSIPSFFPQSKLVPKTR
FAVDAFRSAGDFSVSYFLSHFHSDHYTGLSPNWSKGVVFCSHTTANLLIKVLNVPSPIVV
PLPLRETVVIDGCEVTLIDANHCPGAVQFLFRIPRPNGEFDRYVHTGDFRFCDWMKLDPF
LAEFIGSDAVFLDTTYCNPKFVFPSQEESVEYVASVIARIGSEYHKGGSMRNVLFLVATY
VVGKEKILLEIARRCGRKIHVDARKMEVLRVLGYGESGVFTEDECESDVHVVGWNVLGET
WPYFRPNFVKMKEIMEERGYSKVVGFVPTGWTYEVKRNKFTVRSKDSFEIHLVPYSEHSN
YDELREYVKFLKPKRVVPTVGLDVENLDSKHANKMRKHFAGLVDEMANKQEFLRGFYRGS
CEMVDKVQKDASNASNEGMDGENEIKASKGKTIKITDPDLVLDLSSSLKESGTQDPVVLN
VEDAYSLKQPGSQDLTVLDDEETEKIIQELRDCLPAWVTRSQMLDLISSSGRNIVEAVSN
FYERETEFHEQVFACTASTSTSQTSSLNDSASLLNTGIVMSSPVVTVGKSLSQDGEPACL
MHLIKSGSGISPGKMNRTIGDGPNKKVKVNSINSGTSPGKRKMNTVNKLNKKAKVNSTSG
SGGSKQPTITRFFSKVLPDVSQGGKVGSTFEQCPKDENLLPDAAAKLYEDEIDLFIQIIN
GNESSKSHAANILKKTKGDINKALDIYYCNPKGDLSDSSKPVLAQSGVDNCSPGQTKNVP
ERSECIPDISVQALLTKDADATLVSLPPEKYSPIEHACWRSGQPAPYIHLARTFGQLEDE
KGKIKATSMLCNMFRSLLILSPEDVLPAVYLCTNKIAADHENIELNIGGSLVTSALEEAC
GTNRSKIREMYNKLGDLGDVAQECRQTQTLLAPPSPLLIKDVFSALRKISVQTGSGSTVR
KKSLMVNLMCSCREKEMKFLVRTLVRNLRIGAMMRTVLPALAQAVFINSCPNFYHEGRVE
NLKEKLQCLSATVVEAYNIVPNLDLVVPSLMIKGIEFSSSTLSMVPGIPIKPMLAKITNG
IPQALKLFQNKAFTCEYKYDGQRAQIHKLVDGSVRIFSRNGDETTSRFPDLINIIKESCK
PAAMTFVLDTEVVAVDRKNGCRLMSFQELSSRGRGSKDTFITVDSVKVDICVFVFDIMFA
NGERLLSFSLRQRRKKLKDLFYDEKLGYFEYAKEMTVEADDTCLTNEATLSKISSFLEDA
FRSSCEGIMVKSLDVDAEYSPSKRTDTWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGW
YSPFLMACYNPDTEEFQSVCRVMSGFSDSFYREMKDLFSGDRILSKKPAYYLTAELPDMW
FSPEVVWQIRGADFTVSPVHKAAIGLVHPSRGISIRFPRFIRSVSDRNPEECSTAADIAE
MFQSQTRKMDVPAED
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcccagtcctccaaaaccctaaccctagactcctcccacctcttcctcacc
gcccttcaatccctcgctcaacaacaaacgcttccgccaccaccaccgctctcaccccct
cttcctcttccttctattccttcctttttcccacaatccaagctcgtccccaaaacccgt
ttcgcagtcgacgccttccgctccgctggcgatttctccgtctcctacttcctctcccac
ttccactccgaccactacaccggcctctcccccaattggtccaaaggcgttgttttctgc
tcccacaccaccgccaatctccttatcaaagtcctcaatgtcccttcgccgatcgtcgtc
ccgttgccgctccgcgaaaccgtcgtgatcgatggctgcgaggttacgctcatcgacgcc
aatcattgtcccggtgcggtgcaattcttattcaggattccacgtcccaacggagaattc
gataggtatgttcacacgggcgattttcggttctgtgattggatgaaattagaccctttt
ttagctgaatttataggttccgatgcggttttcttggatactacgtattgtaatccgaaa
tttgtgtttccgtcgcaagaagagtctgttgagtatgttgctagtgtgatagcgagaata
gggagtgaatatcataagggtggttcgatgaggaatgttttgtttcttgtagctacttat
gttgtcgggaaagagaagattttacttgagattgcgcggaggtgtggtaggaagatacac
gtggacgctagaaaaatggaggttttgcgtgttttggggtatggagagagcggggtgttt
acagaggatgagtgtgaaagtgatgttcatgttgttgggtggaatgtcttgggtgagaca
tggccatattttaggcctaattttgtgaaaatgaaggagatcatggaggaaagagggtac
tctaaggttgtgggttttgttccaacagggtggacttatgaagtgaagcgcaataagttt
acggtgaggtctaaggattcgtttgagattcatcttgtaccttatagtgaacattcaaac
tatgatgaacttagggaatatgtgaagtttttgaaacccaagcgtgttgttcctacggtg
ggtttggatgttgaaaatctagacagcaagcatgctaataaaatgcgaaagcattttgct
gggctagttgatgaaatggccaacaagcaagagttcttaagggggttttatcgagggtcc
tgtgaaatggttgacaaggttcaaaaggatgccagcaatgcctcaaatgaggggatggac
ggggagaacgagatcaaggcatccaagggaaaaaccattaaaataactgatccggatctt
gttttggacttgtcatcttctctgaaagaatctggtactcaagatccagttgtcttgaat
gttgaggatgcatattctctgaaacagcctggttcacaagatctaactgtgttggatgat
gaggaaacagagaaaatcattcaggagcttcgtgattgcttgccagcatgggtcactcga
agccagatgttagatctaattagcagctctggaaggaatattgttgaagcagtgtccaat
ttctatgaacgtgaaactgaatttcatgagcaagtttttgcttgtacagcttctacatct
acttctcagaccagctcacttaatgactctgcatcacttttgaacacaggtattgttatg
agcagtccagttgtaactgttggcaaatctttaagtcaagacggtgagccagcctgcctg
atgcatttgattaagagtggcagtggcatttctcctggaaaaatgaataggactattggc
gatgggccaaacaagaaagtaaaagtcaattcaattaacagtggcacttctcctgggaaa
aggaaaatgaatactgtgaataagctaaacaagaaagcaaaggtcaattcaacatcgggc
tctggtgggtcaaaacaacctacaattacaagatttttcagtaaagttttgcctgatgtt
tctcaaggtggtaaggttggaagtacgtttgagcaatgccctaaagatgaaaatctgttg
cctgatgctgctgccaagttatacgaggatgaaatagatctgtttattcaaataataaat
ggtaacgagtcatctaaaagccatgctgccaacatcctaaagaagacaaaaggagatata
aataaggcattggatatatactactgtaatcctaagggtgaccttagtgactctagcaaa
ccagttcttgcacagagtggtgtcgacaactgctctcctggccaaacgaagaatgtgcca
gagagatcagaatgtattcctgatatctctgttcaggcattattaacaaaggatgcggat
gcaactcttgtatcactaccgccggaaaaatacagtcctatagagcatgcatgctggagg
agtggacaacctgctccatatatacatcttgcaagaacatttgggcagctcgaggacgaa
aagggaaagataaaagctacttctatgttgtgcaatatgttcagaagtttgctgatcttg
tctccggaggatgtgctgcctgccgtgtatttgtgcacaaataagattgctgctgaccat
gaaaatatagagctaaacattggtggtagtttggtcacatcagcactcgaagaggcatgt
ggcacaaatcggtccaaaataagagagatgtataacaagcttggtgatcttggtgatgtt
gctcaagaatgccgacaaacacagacattacttgcccctccttcaccacttctaattaaa
gatgtattttctgcactccgaaagataagtgtacaaacaggcagtggaagtactgttcga
aagaaaagcctcatggtaaatctcatgtgttcttgtagagagaaggagatgaagtttctt
gttagaactttggtcaggaatttacggattggagcaatgatgagaactgttcttcctgct
ttggctcaagctgtctttattaattcctgccctaacttttaccatgaaggaagagttgaa
aatttgaaggagaagcttcagtgcctttctgcgactgtagttgaagcctataatatagtc
cccaatttggatctggttgttccctctctcatgatcaagggcattgaattttcttcttca
actttgtcaatggttccaggaatacctattaagcctatgcttgcaaaaatcaccaatggt
atcccgcaagcgctgaagctcttccaaaataaagcctttacatgtgaatataaatatgat
ggtcagcgtgcccaaattcacaaattagttgatggatctgtacgcattttttcacgaaat
ggggatgaaacaacatcaagatttccagatttgattaatataattaaggagtcgtgtaag
cctgctgcaatgacttttgtactggatacagaggttgttgcagttgataggaagaatggc
tgcagactcatgtccttccaagaactatcttcacgagggagagggagcaaagataccttt
attacagtggatagtgtgaaggttgatatttgcgtgtttgtctttgatataatgtttgct
aatggagagcggctgttgagcttttctctccgccaaagacgaaaaaaactgaaggatttg
ttttatgatgagaagttgggatattttgaatatgcaaaggaaatgacagtcgaagcagat
gatacttgtttgaccaatgaagccacgttaagtaagataagctcttttcttgaagatgca
ttccgctcctcatgtgaagggatcatggttaaatcactggatgttgatgctgaatattct
ccatcaaagcgtactgacacatggttaaaggtcaagcgagactatgtggaaggattgaat
gactctcttgatttagtcccaatcggtgcttggcatggtaatgggagaaaagctggatgg
tacagtccatttcttatggcatgttacaaccctgacactgaggaattccaaagcgtatgc
cgtgtcatgtccggattctcagattctttttacagagagatgaaagatttattttctggg
gacaggatcctgtctaaaaagccagcttattatctaacagccgagttgcctgatatgtgg
ttttcaccagaagttgtttggcaaataaggggtgcagacttcacagtgtcaccagttcac
aaggctgccataggtttggttcatccatctcgtggaatctcaatcagattccctagattc
atccgctctgtttctgatagaaatcccgaagaatgtagcacagctgcagatatagctgaa
atgtttcaatctcagactcgaaagatggacgtgccagctgaagattga
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