Cereibacter azotoformans: LV780_00080
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Entry
LV780_00080 CDS
T07975
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cazt
Cereibacter azotoformans
Pathway
cazt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LV780_00080 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cazt03019
]
LV780_00080 (recQ)
03400 DNA repair and recombination proteins [BR:
cazt03400
]
LV780_00080 (recQ)
Enzymes [BR:
cazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LV780_00080 (recQ)
Messenger RNA biogenesis [BR:
cazt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LV780_00080 (recQ)
DNA repair and recombination proteins [BR:
cazt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LV780_00080 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
UIJ30615
LinkDB
All DBs
Position
1:complement(24790..26835)
Genome browser
AA seq
681 aa
AA seq
DB search
MPAPRDLLHSVFGFPDFRPGQEEIVQAVRAGRNTLAIMPTGGGKSLCYQLPALCREGVTL
VVSPLIALMRDQVRSLREAGVEAGALTSGNTEAETDEVFRALDEGRIKLLYMAPERLASA
GAFALLRRVGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRALDVPLAAFTATADAETQE
EIVARLFDGAPPATFLRGFDRPNIHLAFAVKSSPRQQILSFAAARKGRSGIVYCATRAKT
ETLAQALREAGHSACHYHGGMEADDRRAVEIRFQQEDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIESYYQEIGRAGRDGAPAETLTIYGPDDIRLRRAQIDEGLAPPDRKAADHARL
NALLGLAEATGCRRQVLLGYFGEASQPCGTCDLCERPAELFDATEPVRKALSAILRTGEW
FGTGHLIDILTGNATQKVRDRGHDQLPTFSVGRDLSRPAWEAVFRQMMGRDLVRPDTERH
GALKMTEAARPILRGEEQITLRRDTVKSAAARPQARALVSEEDAPLLSALKAKRRALAEA
AGVPAYVIFTDRTLIEMAERRPQSLDDMAGITGVGAKKLDSYGATFLEVITGEAEAAMHP
QRRRLAGRNSAELFDRLAEVQVALMRGEDGTGKPMSLPQSTLRRIAEARPSTLADLDRVG
DLGAQKMERFGDAFLDVLREA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgccgcgtgaccttctccattccgtctttggcttccccgacttccgtccgggg
caggaagagatcgtgcaggccgtgcgcgccggtcgcaacacgctcgccatcatgcccacg
gggggcggcaagtcgctctgctaccagttgcccgcgctctgccgcgagggggtgacgctc
gtcgtctcgccattgatcgcgctgatgcgcgaccaggtgcgctcgctgcgcgaggcgggg
gtcgaggcgggcgccctgacctcgggcaacaccgaggccgagacggacgaggtgttccgg
gcgctcgacgagggccggatcaagctgctctacatggcgcccgagcggctcgcctcggca
ggcgccttcgcgctgctgcgtcgggtgggcgtcagcctcatcgcggtggacgaggcccat
tgcgtcagccagtggggacacgacttccgccccgactacctgcgcatcggcgaattgcgc
cgcgcgctcgacgtgccacttgcggccttcaccgcgacggccgacgccgagacgcaggaa
gagatcgtcgcgcgcctcttcgacggcgcgcctcccgcgacgttcctgcgcggcttcgac
cggccgaacatccacctcgccttcgccgtcaagtcgagccctcggcagcagatcctgtcc
ttcgcggccgcccgcaagggccgctcgggcatcgtctattgcgcgacgcgggccaagacc
gagacgctcgcccaggcgctgcgcgaggcgggccattccgcctgccactaccacggcggg
atggaggccgacgatcgccgcgccgtcgagatccgcttccagcaggaggacgggctgatc
gtggtggcgacggtggccttcgggatggggatcgacaagccggacatccgctgggtggcc
catgccgacctgcccaagtcgatcgagagctattaccaggagatcggccgcgccggccgc
gacggcgccccggccgagacgctgaccatctacggacccgacgacatccgcctgcgccgc
gcccagatcgacgaggggctggccccgcccgaccgcaaggccgccgatcacgcccggctg
aacgcgcttctggggctggccgaggccaccggctgccggcggcaggttctgctcggctat
ttcggcgaggcgtcgcagccctgcggcacctgcgatctctgcgagcgtccggccgagctg
ttcgacgcgaccgagcccgtgcgcaaggcgctctcggcgatcctgcgcacgggcgaatgg
ttcgggaccggccatctgatcgacatcctgaccggcaatgcgacccagaaggtgcgcgac
cgtgggcacgaccagcttcccaccttttcggtcggccgcgatctgtcccgcccggcgtgg
gaggcggtgttccggcagatgatggggcgcgacctcgtgcgccccgacaccgaacgccac
ggcgcgctgaagatgaccgaggccgcgcgccccatcctgcgcggcgaggagcagatcacg
ctccgccgcgacacggtgaaatccgccgcggcacggccgcaggcccgcgcgctggtctcg
gaagaggatgcgccacttctctccgcgctgaaagccaagcgccgggcgctggccgaggcc
gcgggcgtgccggcctatgtgatcttcaccgaccgaaccctgatcgagatggccgagcgc
cgcccgcagagcctggatgacatggccggcatcacgggggtcggcgccaagaagctggac
agttacggcgcgaccttccttgaagtcatcaccggcgaggccgaggccgccatgcatccc
cagcgccgccgcctcgcagggcgcaactcggccgagctgttcgaccggctggccgaggtt
caggtcgcgctgatgcggggcgaggacggaacgggcaagcccatgagcctgccgcagagc
acgctgcgccggatcgccgaggcgcggccctcgacgctggcggatctcgaccgcgtcggc
gatctgggcgcccagaagatggagcggttcggcgacgccttcctcgacgtgctgcgcgag
gcctga
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