Cereibacter azotoformans: LV780_10225
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Entry
LV780_10225 CDS
T07975
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cazt
Cereibacter azotoformans
Pathway
cazt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LV780_10225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cazt03400
]
LV780_10225
Enzymes [BR:
cazt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LV780_10225
DNA repair and recombination proteins [BR:
cazt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LV780_10225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
UIJ29677
LinkDB
All DBs
Position
1:2038891..2040348
Genome browser
AA seq
485 aa
AA seq
DB search
MPEVVLPRLGTVAAWRTEARRLARAGIPAEAVVWRIGAGEPDLFASEPARASAPPREIRL
PREAVEVIETALCHADPERFARSYALLLRLADGSVRWGDRSDPALRRLLAQEKTVRREIH
KMHAFVRFRELPATGTRRTFAAWFEPDHPVEEAAAPFFTRRFGDMDWAIVTPEVTSRFVN
GTLEHVLTEDRTPPPPDGTEDLWRTYYANIFNPARLMVKAMQSEMPKRYWKNLPEAGLIP
DLIRGAAGRAAAMQAAAPTEPPARTAAMARRREAAAEGSARRAGAGEPAALPQAKAEAEA
CRRCGLWAHATQVVFGEGPPRARMMMVGEQPGDREDLAGRPFVGPAGQLLDEEATAAGLD
RSTLYVTNAVKHFKFSPRGKRRIHQKPDAGEVTACRWWLDLERDLVRPRLIVAMGATALA
SLTGTGAGILRRRGTVERLEDGTPVFVTVHPSYILRLPDAAAQTEERRRFRADLAAAHAL
LGTLD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggtggtcctgccgcggctgggaacggtggccgcctggcgcaccgaggcgcgg
cggctggcgcgcgccggcatcccggccgaggccgtcgtctggcgcatcggcgcgggagag
cccgaccttttcgcaagcgagcccgcccgcgcctcggcgccgccgcgcgagatccgcctg
ccgcgcgaggcggtggaggtgatcgagaccgcgctctgccacgcggaccccgagcgcttt
gcgcgcagctacgcgcttctgctgcggctggcggacgggtcggtgcggtggggagaccgc
agcgacccggccctgcgccggctgcttgcgcaggaaaagaccgtccggcgcgagatccac
aagatgcacgccttcgtgcggttccgcgaattgcccgcgaccggcacccgccgcaccttc
gccgcctggttcgaacccgatcacccggtcgaggaggccgcagcccccttcttcacccgc
cgcttcggggacatggactgggccatcgtcaccccagaggtgacgtcgcgcttcgtgaac
ggcacgctggaacatgtgctgaccgaggaccgcacgccgccgccgcccgatggaacggaa
gacctctggcgcacttactacgccaacatcttcaaccccgcccggctgatggtgaaggcg
atgcagtccgagatgccgaagcgttactggaagaacctgcccgaggccggcctgatcccc
gacctgatccggggcgcggccgggcgtgccgcggcgatgcaggcggccgcaccgaccgaa
ccgcccgcccgcaccgccgccatggcgcgacggagagaggcggcggccgaaggctctgcc
cgcagggccggcgcgggagagcccgcggcccttccgcaggcgaaggccgaagccgaggcg
tgccggcgctgcgggctctgggcccatgcgacgcaggtcgtcttcggtgaagggccgccc
cgtgcgcggatgatgatggtgggcgagcagccgggggaccgcgaggatctggccggccgg
ccgttcgtggggcccgcggggcagctccttgacgaagaggccaccgccgccgggctcgac
cgctcgacgctctatgtcaccaacgcggtcaagcacttcaagttctcgccgcggggcaag
cgccgcatccaccagaagcccgacgcgggcgaagtcaccgcctgccgctggtggctggat
ctcgagcgcgatctcgtgcggccgcggctcatcgtggcgatgggcgccacggcgctggcc
tcgctgaccgggacgggcgccggcatcctcaggcggcgcggaacggtggaacgactcgaa
gacgggacgccggtcttcgtgacggtccatccctcctacatcctgcgcctgcccgacgcc
gcggcccagacggaggagcgtcgccgcttccgtgcggatctggccgcggcccatgccctg
cttggcacgctggactga
DBGET
integrated database retrieval system
