Serpentinimonas maccroryi: SMCB_2020
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Entry
SMCB_2020 CDS
T03627
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase and related ATP-grasp enzyme
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cbab
Serpentinimonas maccroryi
Pathway
cbab00470
D-Amino acid metabolism
cbab00550
Peptidoglycan biosynthesis
cbab01100
Metabolic pathways
cbab01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMCB_2020 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMCB_2020 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SMCB_2020 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbab01011
]
SMCB_2020 (ddl)
Enzymes [BR:
cbab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SMCB_2020 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbab01011
]
Precursor biosynthesis
Amino acid ligase
SMCB_2020 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
ATP-grasp
RimK
GARS_A
ATP-grasp_4
TTL
Motif
Other DBs
NCBI-ProteinID:
BAO84248
UniProt:
A0A060NXI5
LinkDB
All DBs
Position
complement(2184437..2185456)
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AA seq
339 aa
AA seq
DB search
MTTPNPTPIDPRALGKVAVLLGGFSAEREVSLMSGQGVLAALQRSGVDAHAFDLAGHELS
ELKRAGFARAFIALHGRFGEDGTVQGALELMGIPYTGPGVLASSLSMDKLMSKRLWRAEG
LSTPNWRQVRSAAQTEAALAALGAPMIVKPAREGSTIGLSKISHPSECAAAYALAARCDP
EVLCEQYIAGDEVTVALLGQGEAVQALPLIRIVVPGGNYDYEHKYFSDETQYLVPSGLPA
AEEAAIQQLAVQAYQSLDCRGWSRVDVMIDAASRRPYLLELNSSPGMTGHSLVPMAAQAV
GISYEALCLQLLASASLDNPLPAAAALTAALTAAQSAAQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccccgaaccccaccccaatcgacccacgcgcgctgggcaaagtggcggtgctg
ctgggcggcttttcggccgagcgcgaagtctcgctgatgtcgggccaaggcgtgctcgcc
gccttgcaacgcagcggcgtcgatgcccacgcctttgacctcgccgggcacgagctgtcc
gagctcaagcgcgctggctttgcgcgcgccttcatcgccctgcacgggcgctttggcgaa
gacggcacggtgcagggcgcgctcgaactcatgggcattccctacaccgggccgggcgtg
ctggcctcgagtctgagcatggacaagctcatgagcaagcgcctgtggcgcgccgaaggc
ttgtccacgcccaactggcgccaggtgcgcagcgccgcccaaaccgaggccgcgctggcg
gcgctgggcgcgccgatgatcgtcaaaccggcgcgcgagggctcgaccatcggcctgagc
aagatcagccaccccagcgaatgcgccgccgcctacgcgctggccgcgcgctgcgacccc
gaggtgctgtgcgagcagtacatcgccggcgacgaggtcacggtggcgctgctgggccaa
ggcgaggcggtgcaggcgctgcctttgatccgcatcgtcgtgcccggcggcaactacgac
tacgagcacaaatacttcagcgacgaaacccagtacctggtgcccagcgggctgcccgca
gccgaagaagcggcgatccagcagctggccgtgcaggcctaccagagcctagactgccgc
ggctggtcgcgcgtcgatgtgatgatcgacgccgccagccgccgcccctacctgctggag
ctcaactcctcgcccggcatgaccgggcactcgctggtgcccatggcggcgcaggcggtg
ggcatcagctacgaagcgctgtgcctgcagctgctggccagcgccagcctcgacaacccc
ttgcccgccgccgcagccctgaccgcagccctgaccgcagcccagtctgccgcgcagtaa
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