Chitinophaga caeni: COR50_07285
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Entry
COR50_07285 CDS
T05360
Name
(GenBank) SusC/RagA family protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbae02000
]
COR50_07285
Transporters [BR:
cbae02000
]
Other transporters
Pores ion channels [TC:
1
]
COR50_07285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
STN
CarboxypepD_reg
FecR_C
Chordopox_G3
Motif
Other DBs
NCBI-ProteinID:
ATL47003
UniProt:
A0A291QT05
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Position
1735508..1738810
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AA seq
1100 aa
AA seq
DB search
MRLKLLLLFAACLLHCCELFAQEPTKKITLTVKKQRLENVFKEVKKQTGYTVFYNEGLAD
KIKSIKVSFAVKNADVTDVMKLCFKDHGLTYKLIGNAIIILEGNIPAAPGDTKEQTEETN
PKFSVSGLILNGQGEMMDNVNVIVKRTGKGAITDKKGEFKIEDILPNDVIRCSMVGYATA
EVPVNGQNMIYVTMAVATNTLDQVVLQGYGKTSQRFATGNITRITAKEIEDQPVSNPLLA
LQGRVPGLVITQTNGYASAPVNVAIRGVSSLNLNTEPLYIIDGVPVSVTGQQGILYGNSF
TGGLSPLFNINPKDIESIDVLKDADATAIYGSRGTNGVVLITTKKGVPNATTFNLNVTQG
IQKITRYWDMLNTQQYLQMRREAFKNDGITPTAANAPDLLAWDQDRYTNWQKELWGGTGL
NTAISAGLSGGNRQTTFRINGGYSRVTDITVVSGASQRGTMALGLSHTTKDYRFSTDLSV
NFANSLVDVVNGSGNPRLAPNSPAIFDKDGNLNWNEWNAGGGPDVFPFGTLKQSNPQRTN
ALTSSLRLSYKPFKGFSFNTLFGYTYTQNANDFFNPITSQNPNKNPVGYASFNTNRVSGW
NIEPQADYHFLLGEASVDVLLGATLTSSSGVATSVVGRGYTDDNLLYSIVNAPVIERPTD
AYFYSKYLGAFARISYNLKNRYVINLNGRRDGSSNFGPGRQFGNFGSIGVAWIASEEEWM
DKILPSFISNVKFRGSYGTTGNTGGSTYQYLSLWGSSASPSQPYPLYDGMVPYIPQNPPN
QNYYWEQNKKVEGAIEIGLLENTITLSVSHYRNRTGNQITGYPLPQFTGFNSIITNLPAT
IQNSGWEGLVNAQLLRKKDMTWSVSFNISTNKNLLVSFPDLETSPYASRYKVGYPLTTRY
VFHYLGVNPLTGSFAIEDHDKNGDIGAAAGAFNPDSYISLDAAPQYYGGISSMYRYKQFS
LGLQFNFTKQMGENALYTSGSFGSFNNNIAVEVYKKNWKKPGDITPYPAFSTSFNQRDNL
FSMSDGAYTDASYIRLSNLSLTYNLPGTWLSKLKMKNCSIGLNAQNIFTITGYKGLDPET
RNFGGMPPAKIYVLHLQLSI
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgagactcaaactcttattgttatttgccgcctgtttactgcattgttgtgaattattt
gcacaagaaccaaccaaaaaaattacactgacagtaaaaaaacagcggcttgagaatgta
ttcaaagaagtcaaaaagcaaactgggtacaccgttttttataatgaaggactggcagac
aaaattaagtctatcaaggtttctttcgcggtcaagaatgcagatgtaacggatgtaatg
aagctttgctttaaagatcacgggctcacctataaattaataggcaacgccatcattatt
ttggaaggtaatatacctgccgcacctggagatacaaaagaacaaacggaagaaacaaat
cccaagttctccgtttcgggtttgatcctgaacgggcagggagaaatgatggacaacgtg
aacgttattgtaaaacgtaccgggaaaggagctataaccgataagaagggcgaattcaaa
atcgaagacattcttccaaatgatgttatcaggtgtagcatggtaggttatgcaacggca
gaggtacccgtgaacgggcagaatatgatttatgttacgatggctgtagctaccaacacg
ctcgatcaagtggtgctccagggatacggtaaaaccagccaaagattcgccaccgggaat
attaccaggataactgcaaaagaaatagaagatcaacccgtaagtaaccctttgctcgca
ttgcagggtagggtgccggggttggtaatcacccaaacaaacggttatgccagcgccccg
gtaaacgtggcgataaggggcgtgagttctttaaatttgaatacggagcctttatacatt
atcgatggtgtcccggtaagtgtaaccgggcagcaaggaatattgtacggaaatagtttt
acaggcggcctgagtccattattcaatattaaccccaaggatattgagagcatcgatgtg
ctcaaggatgcagatgctaccgccatttacggatcgaggggaactaacggcgtggtactg
atcaccactaaaaagggtgttcccaatgcaacaacttttaatctcaatgtaacgcagggc
atacaaaagatcacccgctattgggatatgttgaatacgcagcaatacctgcaaatgcgc
cgcgaagcttttaaaaatgatggcattacccccactgctgctaatgctcccgatttattg
gcttgggatcaggatcgctatacaaactggcaaaaggaactttggggcggtacgggcctg
aatacggctatttcggcgggcttatccggtggcaatagacaaacaacattccgcatcaat
ggcggttattccagggtgacggatattaccgtggtttccggggcaagccaacgcggaaca
atggcgttgggattatcgcataccacgaaggattaccgtttttcaacggatctgtctgtc
aactttgccaacagtttggtggatgtagtgaatggttcgggaaatccaaggttggcgccg
aacagccctgccatatttgataaagatggtaacctgaattggaatgaatggaatgccggt
ggcggcccggatgtgtttcccttcggcactttgaaacaatcgaacccgcaaagaaccaat
gcgctcacttccagcctgcgcttgagttacaaaccgtttaaagggttttcctttaatacc
cttttcggctatacttatactcaaaacgctaacgatttttttaacccgataacatcgcaa
aatccaaataagaacccggttggttatgcaagctttaataccaatagggtgagtgggtgg
aatattgaaccgcaggccgattaccatttcctattgggagaagcttccgtagatgtgctg
ctgggcgctaccctaacctcttcctccggtgttgctacctcggtagtagggcggggatat
acagatgataacttgttgtattccattgtaaatgccccggtcatagaacgtccgacggat
gcatacttttattcaaagtatttaggcgcttttgcccgcatcagctataatcttaagaat
aggtacgtgattaatttaaacggccgtagggatggtagttctaatttcggaccgggcagg
cagttcgggaactttggttccatcggtgtagcttggatcgcatcggaagaagagtggatg
gataaaattttgccgtcatttatcagcaatgttaaattcaggggtagctacggaactacc
gggaatacgggcggaagcacctatcaatacctgtcgttatggggttcttcggcttcacct
tcacaaccttatccgctgtatgacgggatggtgccttatatcccgcaaaatccgcctaac
caaaactattactgggaacaaaataagaaagtagagggagctatagagatcggtttgctg
gagaatactattaccttatcagtctcccattaccgcaaccgtaccggcaaccagatcacg
ggctacccgcttccgcaatttacaggcttcaattctatcatcaccaacctgcctgccacc
atacagaatagcggatgggaaggcttagtgaatgcgcaattgttgcggaagaaagatatg
acttggtctgtttcctttaacattagtaccaataagaatctgctcgtatcttttccggat
cttgaaacctctccatacgccagtaggtataaagtagggtatccgcttactacgcgttac
gtatttcactacctgggtgtaaatccgctaacggggagcttcgctatcgaggaccatgac
aaaaacggcgatattggtgccgccgccggggcgttcaatcccgactcatacataagtctt
gacgctgctccgcaatattatggaggaatcagctccatgtacaggtataaacaatttagc
cttggcctccaatttaacttcacgaaacagatgggggagaatgcgctttacacgtcgggc
agcttcgggagtttcaacaataacatagcagtggaagtttacaagaaaaattggaaaaag
cccggagatattacgccttatccagcattttcaacttcgtttaaccaaagggataatctt
ttttcaatgtctgacggagcttatacggatgcttcttacatacggctcagcaacttatcg
cttacttataacctgccgggtacttggttgagcaagctgaagatgaaaaattgttccatc
ggactgaatgcgcaaaatatttttacgattacgggctacaaagggcttgacccggagacg
cggaattttggcggtatgccacctgccaaaatctatgtcttacacctgcaattaagtatc
taa
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