Clostridiales bacterium FE2010: JS518_13400
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Entry
JS518_13400 CDS
T08976
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
cbaf
Clostridiales bacterium FE2010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
GGDEF_2
dCache_1
Motif
Other DBs
NCBI-ProteinID:
QTE73871
LinkDB
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Position
complement(3005086..3007344)
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AA seq
752 aa
AA seq
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MKSKSITFYRYILSYALVLFLPIVFLFTLFNSFLLDRYKQEIADNSTRLLTQIQENMDTQ
LEQLINISYMIQNNAVVNLRTNEGDVVAARKAVDTLSVLHSISSLPDYLITYRSGTEYCF
TSSSRIRPEKLFSDQLVYAGHTLEDFYATVNRPENIITWPADTVRQYGGQEAEYVTLFIS
VSGNVRTPKLRTAYLIPSSRIRNNVVRVTEEYGGSVQITDSDGALLLGIGPVSREEFLQA
GEPAADGSVQAGGEKYLLSSAHSSVVGWDYTVLIPARVIEAPMHNMRRVMILLLIAVSIL
GATIVYFLSNLHYKPLKRLTEKALSSHEPQPGDSRTGRTDEMRQVEAVLDALAQESRSSR
LALEESRGVLLQSSLRRLLAGEYSTRLKEELARNGLALCDGDQYRVAVLDCDRRRLTALR
EEADVFIASLSFGRQDAVLCSSLPGEGSFAILFPGAAEDDRAEDSLYSLKGRLEDACGVP
VSIGLSLPCSAQEIGTAYTQAVRALQFRLVRGSGCLVTYSSDLDTASSLQNYPREQLEQL
QWYLLQRDPENVSRLLHRLLDNLQKGPVSFNFVRMVCFDVVNTTVSTLYTGKQGVPAPTV
QPEMLEQLISFDTVPELVELLEQFVDETCASLKTLQPDSGDDRLQEMKAYIEENCFDEIF
SLQAMADRFSLTPSNLSHYFKSCAGQGVLEYVQAQRKKEACRLLSQTDEPVQIVGARVGM
PNVSSFIRFFKQQTGITPGQYRKQTRTSNSEE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaaaagtattaccttttatcgctatattctttcctacgcgctcgtgcttttt
ctgccgatcgtctttcttttcacgctcttcaactccttcctgctggaccgctacaagcag
gagatcgctgacaacagcacccgcctgctgacccagatccaggaaaacatggacacgcag
ctggagcagctgatcaatatttcctacatgatccagaacaacgccgtggtcaatctccgg
accaacgaaggcgacgtggtggctgcccggaaagcagtggataccctgagcgtcctgcat
tccatatcctccctgccggattacctgatcacctaccgttccggcacggaatactgcttc
acttcttcctcccggatccgcccggaaaagctgttctccgaccagctggtatatgccggc
cacacactggaagatttctacgccacggtgaacagaccggaaaacatcatcacctggccg
gcggataccgtacgccagtacggcgggcaggaagcagaatatgtcacgctcttcatctct
gtctccggcaacgtgagaactcccaagctgcgcacagcctacctgattccttcctcccgg
atccggaataacgtcgtccgggtcaccgaggaatacggcggaagcgtccagattaccgat
tctgacggtgcgctgctgctcggcatcggtcctgtatcccgggaggagttcctccaggcc
ggagaaccggccgccgacggatctgtccaggccggcggagaaaagtacctcctttcctcc
gcccactcgtcagtggtcggctgggactacaccgtgctgatccccgcccgggtgattgaa
gcaccgatgcacaatatgcggcgggtgatgatcctgctgctgattgcggtttccatcctg
ggagccaccatcgtctatttcctttccaacctgcattacaaacccctgaagcggctgacc
gaaaaagccctgagcagccatgagccgcagcccggtgattcccgtaccggccgtacagat
gaaatgcgccaggtggaggccgtgctggatgccctggcccaggaaagccgctccagccgc
cttgcgctggaagaaagccgcggcgtcctgctgcagagcagcctgcgcaggctgcttgcc
ggtgaatacagcacccggctgaaagaagagcttgcccgcaacggtctggccctttgcgac
ggcgatcaataccgggttgccgtgctggactgtgacagacgccggctgaccgccctgcgg
gaggaagcggacgtcttcatcgcctccctgtcctttggccggcaggacgcggtgctctgc
tccagcctgccgggagaaggcagcttcgccatactcttccccggtgccgctgaagatgac
agggctgaggacagcctttacagcctgaaaggccggctggaagacgcctgcggcgtgccc
gtttccatcggactcagcctcccctgttcagcgcaggagatcggcactgcttatacccag
gccgtccgcgcgctgcagttccgcctggtacggggcagcggctgcctggtaacatattct
tccgacctggataccgcctcctccctgcagaactatccccgggagcagttggaacagctg
cagtggtacctgctgcaacgggatccggagaatgtttcccgcctcctgcaccgcctgctg
gacaacctgcagaaaggtcccgtttccttcaacttcgtccggatggtctgcttcgacgtg
gtgaacactaccgtaagcaccctctataccggaaagcagggcgtccccgctcccaccgtg
cagcccgaaatgctggagcagctgatctccttcgacacggtaccggaactggtggagctg
ctggagcagtttgtggatgagacctgcgcctccctgaaaaccctgcagccggacagcggc
gatgaccgcctgcaggaaatgaaagcctacattgaggaaaactgctttgacgaaatcttc
tccctgcaggctatggcggaccgcttcagcctgacgccctccaacctgtcccactatttc
aagagctgtgcgggacagggcgttctggaatacgtacaggcacagcgcaaaaaagaagcc
tgccggctgttgtcgcagactgacgaacctgtgcagattgtgggggcccgggtgggcatg
cccaatgtgtcttccttcatccgcttcttcaagcagcagaccgggattacccccggccag
taccggaaacagacacgtacttccaattcagaagaataa
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