Petrocella atlantisensis: PATL70BA_2624
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Entry
PATL70BA_2624 CDS
T05737
Symbol
recD
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PATL70BA_2624 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_2624 (recD)
Enzymes [BR:
cbar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PATL70BA_2624 (recD)
DNA repair and recombination proteins [BR:
cbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PATL70BA_2624 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
PIF1
UvrD-helicase
HHH_5
T2SSE
AAA_22
SLFN-g3_helicase
Helicase_RecD
DEAD
AAA_28
AAA
HHH_2
nSTAND3
ABC_tran
RsgA_GTPase
NTPase_1
TrwB_AAD_bind
KAP_NTPase
UvrD_C
AAA_16
AAA_29
Rad17
ResIII
SRP54
cobW
FtsK_SpoIIIE
DUF5720
AAA_5
AAA_14
Motif
Other DBs
NCBI-ProteinID:
VDN48526
UniProt:
A0A3P7S0Y0
LinkDB
All DBs
Position
1:2683610..2685826
Genome browser
AA seq
738 aa
AA seq
DB search
MERIEGTVEDIIYRNEDNGYTVLTVATKDDELTVVGLMYGITVGEHIIAEGEYASHNIYG
KQLQVTHIETNMPNEAAAIERYLGSGAIKGIGPSLATKIVDRFKEDTFFTIESEPLKLAE
IKGISEKMAQNIATIFYEQRSMRQVVIFLQEYGLSLTYALKIYGEYKERTYDIVKKNPYV
LAEDIQGISFRMADDIAEKIGIEKTSDFRMMAAIKHVLMRSALDGHTYLERERLIELTTE
LLIIEVLDFDHAFMNLQLNGHIMIEEIEGKVCIFLTSFDNMEKYIAAKLFELTHVSLEQH
DYTDKEIENIEKEMGICFDENQKNAITQALTCGTLVITGGPGTGKTTTLNAIIKLFDERR
QEVLLAAPTGRAAKRMSETTGQTAKTIHRLLEISGGAEGHQRFERNEDYPIEADVIIIDE
TSMMDTVLTYHLLKAIVPGTRVIFVGDQDQLPSVGPGNVLKDIIHSGYIHTVKLQQIFRQ
AGESHIVVNAHKINSGEMIDLTNNTKDFFFVRRQDPRHVIGEIITLIKSRLPKFAGLESF
EGIQILTPTRKGLLGVDNLNLELQKNLNPPSKDKTEKLYGTRLFREGDKVMQIKNNYNIS
WRIMSDYGFTVDEGLGVFNGDMGQIVEINLYTEKIKVLFDDDRMVYYEFKGLDELDLAYA
VTIHKSQGSEYPIVIMPMFKGPALLLNRNLLYTGITRAKRYVVLVGDEQVIMQMIHNKRE
MLRNSALKQRLLEVFSVK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaattgaaggcacagtagaagatatcatatatcgcaatgaagacaatggttac
actgtgcttacagttgcaaccaaagatgatgagttgaccgttgtaggacttatgtatggc
atcacagtcggggaacatattattgctgaaggcgagtacgcctctcacaatatctatggc
aaacaacttcaggtgacgcatattgagacgaatatgccaaatgaagcagcagccattgag
agatatttaggatctggtgcaattaagggtattggcccatctttagcaactaagattgtc
gatcgtttcaaggaagatacattttttactatcgaaagcgaacccttaaagttggctgag
ataaaaggcattagtgaaaaaatggcacagaacatcgccaccatcttctatgaacaaaga
agtatgcgacaggttgttatatttttacaagaatatggcttgtccttaacctatgcacta
aaaatatatggtgaatataaagaaagaacctatgatattgtcaaaaaaaatccatacgta
ttagctgaagacatacaaggtatatcttttaggatggctgacgacattgccgagaagatt
ggcatagaaaaaacttcggattttagaatgatggcggctattaagcatgtcttgatgcga
agtgcactggatggtcatacctatcttgagcgggaaaggcttattgagctgacgacggag
ctattgattatcgaagtactcgattttgaccatgcctttatgaacttacaactgaatggg
catattatgattgaggaaattgaaggaaaagtatgcattttcttaacctccttcgacaat
atggaaaagtatattgctgcgaagttgtttgagttaacccatgtcagtctggaacaacat
gattatacggacaaagagatagaaaatatcgaaaaagagatgggtatctgctttgatgaa
aaccaaaaaaatgccatcactcaagccttaacttgcgggactctagttataaccggcggt
ccgggtacaggaaaaaccacaaccctaaacgccattatcaaactttttgatgaaagaaga
caagaggtacttcttgcagcaccgacaggaagagctgcaaaacgtatgtctgaaacaaca
ggacagacggcaaaaaccatacatcgcctattggaaattagtggtggtgctgaagggcac
cagagattcgaacgtaatgaagactaccctatagaagcggatgtcatcatcatcgatgaa
acctccatgatggatacagtactgacttatcaccttcttaaggccattgtaccgggtacc
agagttatttttgttggtgatcaggatcaactgccttctgtcggtccaggaaatgtgttg
aaagatattattcactccggttacatacatactgtcaagcttcaacagatttttagacag
gcgggtgaaagtcatattgtcgttaacgctcacaagattaattcgggagaaatgattgac
ttaaccaataataccaaggatttcttttttgtcagacgacaggatccaagacatgtgatt
ggagagattattaccttaatcaagtcaaggttgcccaaatttgcaggacttgagagtttt
gaaggtattcagattcttacacccacacgtaaagggttgctaggcgtggacaacttgaat
ctagagcttcaaaaaaatctaaacccaccttcaaaagataaaacggagaaattatatggt
acccgtttgtttagagaaggtgataaggtgatgcagattaagaacaactacaacatcagt
tggcgcatcatgagcgactatggctttacagtagatgaaggcttaggtgtctttaacggt
gacatgggacaaatagttgaaatcaatctttatactgaaaagattaaagtgttatttgat
gatgaccgaatggtttactatgaattcaaaggtctggatgagttagatctagcttatgct
gttacgattcacaagtctcaaggcagtgagtatcctattgttattatgccgatgttcaaa
ggaccggcgctgttgttaaaccggaatctattgtacacaggtataacaagagccaagcga
tatgtggtattggtaggagatgaacaggtcatcatgcagatgattcacaataaaagggaa
atgcttaggaactcggcattaaaacaacgtttattggaggtgttttctgtcaaatga
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