Clostridium botulinum A3 Loch Maree: CLK_3656
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Entry
CLK_3656 CDS
T00670
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cbl
Clostridium botulinum A3 Loch Maree
Pathway
cbl00470
D-Amino acid metabolism
cbl00550
Peptidoglycan biosynthesis
cbl01100
Metabolic pathways
cbl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cbl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLK_3656 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLK_3656 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLK_3656 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbl01011
]
CLK_3656 (ddlB)
Enzymes [BR:
cbl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CLK_3656 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbl01011
]
Precursor biosynthesis
Amino acid ligase
CLK_3656 (ddlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
GARS_A
CPSase_L_D2
RimK
ATP-grasp
ATPgrasp_ST
PB1
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ACA56780
UniProt:
B1KV16
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All DBs
Position
555172..556074
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AA seq
300 aa
AA seq
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MKIGVIMGGISTEREVSLNSGREVIKYLELLEHEIIPIIIDKKEDVMEKAKGIDFAFLAL
HGKFGEDGTVQSVLQTLDIPYSGCGPLTSAICMDKDMTKKILKYANINTADWVNVTNAED
IDYEAIEKIGYPVFVKPNSGGSSVATNLVKNKEGIKEAVELALKYDKEVMIENYTKGEEI
TCCMLNGKMLPVLAIRPHAEFFDYTAKYADGGSDEVVIELEENLHKKVEEMALACWKELK
CEVYVRVDMIVKEGVPYVLELNTLPGMTKNSLFPKSANAVGISFAELLNSIVKYSLEVER
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattggagttataatgggtggaatatctacagaaagagaggtttccttgaattct
ggtagagaagttataaaatatttagagcttttagagcatgaaattattcccattattata
gataaaaaagaagatgttatggaaaaagctaagggtatagattttgctttcttagcattg
catggtaagtttggtgaagatggaacagttcaatcagttcttcaaactttagatatacct
tattcaggatgtggtcctttaacaagcgctatatgcatggataaggatatgactaagaaa
attttaaaatatgctaatataaatacagcagattgggtaaatgtaactaatgcagaggac
atagattatgaagctatagaaaaaatagggtacccagtgtttgtaaaacctaatagtggt
ggttccagtgtagctaccaacttagtaaaaaataaagagggaataaaagaagctgtagag
cttgcactaaaatatgataaagaagttatgatagaaaattatacaaaaggtgaagaaata
acttgttgtatgctaaatggcaaaatgctaccagtattagctataagaccacatgcggaa
ttctttgactacacagcaaaatatgcagatggtggatcagatgaagtggttatagaatta
gaagaaaatcttcataaaaaagtagaggaaatggcgctagcttgttggaaagaattgaaa
tgtgaagtatatgtaagggtagatatgatagttaaagagggagtaccttatgtattagaa
ttaaatacattacccggtatgacaaaaaatagcttgttccctaagagtgctaatgcagta
ggaatatcctttgcagaattattaaattcaatagttaaatattcactagaagtagaaaga
taa
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