Clostridium botulinum F 230613: CBF_0037
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Entry
CBF_0037 CDS
T01865
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cbm
Clostridium botulinum F 230613
Pathway
cbm03030
DNA replication
cbm03430
Mismatch repair
cbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBF_0037 (dnaX)
03430 Mismatch repair
CBF_0037 (dnaX)
03440 Homologous recombination
CBF_0037 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbm03032
]
CBF_0037 (dnaX)
03400 DNA repair and recombination proteins [BR:
cbm03400
]
CBF_0037 (dnaX)
Enzymes [BR:
cbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBF_0037 (dnaX)
DNA replication proteins [BR:
cbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBF_0037 (dnaX)
DNA repair and recombination proteins [BR:
cbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBF_0037 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
AAA_5
AAA_7
RuvB_N
AAA_assoc_2
DUF815
DnaX_C
DNA_pol3_delta_C
AAA_30
AAA_18
AAA_19
DUF6395
AAA_14
RNA_helicase
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ADF97878
LinkDB
All DBs
Position
33519..35144
Genome browser
AA seq
541 aa
AA seq
DB search
MGYTALYREWRPRTFKEVVGQKHITVTLKNQVIEKRIAHAYLFCGTRGTGKTSTAKILSK
AVNCLNPKDGEPCNECEICNKINSGTLMDVIEMDAASKRKLEDIKEVIENVKYPPQEGKN
KVYIMDEVHMLTQEAVNAFLKTLEEPPSNVIFILATTDPQKLPITILSRCQRFDFRRIRN
EEIFERLRAIVSEQGIYADDKSLNLIARMSDGAMRDALSILDQVISTGDGKVEYDQVLDM
LGLVTNENLLRITDSIIEKDVEKSMRIIEDIVLSGKDIYNFIKDMITHLRNILMVKVSKN
PNEILDMSSENIDLVKEQSEKIRIEEIMRNIKILQEAEQQSKWVKQNRIYLELAVLKMCK
IEYDTSKEVILSRLNKIEELIKSGNIKLAINEEKKKIEPKEFNLKREKESMQHSKIEKNS
LEDYNKDSKLTVETVKKMWHDILEAFKARRLMVLYAALVTANITDCKEGIITLNYNKQYS
FNKKRLEKPENNKVVQEIFSEVLKEKIRIIYIVEEKAKEENLPEEILKNTFGENILEIID
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
gtgggttataccgcattatatagagagtggagaccaagaacatttaaagaggtagttgga
caaaaacatataacagtaacacttaaaaatcaagttatagaaaaaagaatagctcatgct
tatcttttttgtggaacaagaggtacaggtaagacatctacagcaaaaatactatcaaaa
gcagtaaattgtttaaatcctaaggatggtgaaccttgtaacgaatgtgaaatttgtaat
aaaataaatagtggaactttaatggatgtaatagaaatggatgctgcttctaaaaggaaa
ttagaggacataaaggaagttatagaaaatgtaaaatatccaccacaggaagggaaaaat
aaggtttatataatggatgaggttcatatgttaactcaagaagcagtaaatgcttttttg
aaaactttagaagaacctccgagcaatgtaatattcatattagcaactacagatcctcaa
aaattacctataactatattatctagatgtcaacgatttgattttagaagaataagaaat
gaggaaatatttgaaaggcttagagcaatagtgtcagaacagggcatatatgcagatgat
aaaagtcttaatcttatagctagaatgtcagatggggccatgagagatgctcttagtata
ttagatcaagttatatctactggagatggtaaggtagaatatgatcaagttctagatatg
ttaggattagttactaatgaaaatcttctaaggattacagacagcataatagagaaagat
gtagagaaatctatgaggataatagaagatatagtgctaagtggaaaagacatatataat
tttataaaagatatgataactcatcttagaaatatacttatggttaaagtaagcaaaaat
ccaaatgaaatattagatatgtccagtgaaaatattgatttagtaaaagagcagtctgaa
aaaataagaatagaagaaataatgaggaatataaaaatacttcaagaagcagaacaacaa
tccaaatgggtaaagcaaaacagaatatatttagaattagctgtacttaaaatgtgtaaa
atagaatatgatacatctaaagaagttatactttctaggcttaataaaatagaagagctt
ataaaatcaggtaatataaaattagcaataaatgaagaaaagaaaaaaatagagccaaag
gaatttaatctaaaaagagaaaaagaaagtatgcaacatagtaaaatagaaaaaaattca
ttagaagattataataaggactctaaattaactgtagaaactgtcaaaaaaatgtggcac
gatatattagaagcttttaaagcaagaagacttatggtattatatgcagctttagttact
gcaaacataacagattgcaaagaaggcattattactttaaattataataagcagtattct
tttaataaaaagagattagaaaagccagaaaataataaagtagttcaggaaattttttct
gaggtactaaaagagaaaattagaataatatatattgtagaggaaaaggctaaagaagaa
aatttaccagaagagattttaaaaaatacttttggagagaatatactagaaataattgat
gaatag
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