Caenorhabditis briggsae (nematode): CBG_00068
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Entry
CBG_00068 CDS
T01054
Symbol
Cbr-gei-3
Name
(RefSeq) Protein CBR-GEI-3
Organism
cbr
Caenorhabditis briggsae (nematode)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
8587209
NCBI-ProteinID:
XP_045091460
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All DBs
Position
X:14175296..14193774
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AA seq
1463 aa
AA seq
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MIAKCCSDQKDVSFKIQKSTIPGSLHIVLKIISMENQEGGSSQQKILTYSVASEESILQI
AAIPSLLHQQTLPSAAATAYRSHASESQDELSPTNSSQAPTPAGPISAFRFSSAFFNPDI
LRNLNIQKSSPPNQPTEDVTPPQASQSSSDTPTEPPPPHTVPSTSRPIVIHIAHPIPLAL
NNELLSNSNSAVVLGDWIGCRVLARVPPGVYQTGYVKQSSNNRNVLVQLDDGREARYENI
IHEFNLTLVIADQAPTIAELTQVNANPLLAVRLPLERSESLYRTAQLVKPCVEKDAKYLV
RVTGAPYASLVSRANIRLLRPPWYEDLMQKTSGTSTNPSSKSENGGRRISRENTSLLMTL
QQQRSQYFQNVPSVSSPTSSNQVVALSPPAGTVTIIDPTTQPGSSNRESSSKTVSVDSDE
EIPGSSNQDQSAEPSPNPAAPRSLFVNPSQDSEIFEGDSEGQTTSVFQNITAPVCATKAM
LDQQRFKKGEIVTTQCGIRKKFNGKQWRRLCSKEGCNKESQRRGYCSRHLSLKSKPPHGH
HLERGSPGNSKSDLFHPESSVFLQSPSSSRVPTTVNSTAFSGKINPLSAPSTLLSDKNLP
PHFSIERAQQIQQQLMQLGNVRFENQFQQIQQLLMQQVPPGRRPDLPPMTQANNVFCPPL
SLPNTSGLFNLNPALLSQLTAPLIQQHAQALLQQHMTAQNNQVNNNNIKQEIKEEEPDED
DDDIIGSDNVSYCQKTEERSDDDDDESSGGGGGGLASTGSTNPNGSSSNFAIHSAPTGQS
NVAAPEDHNRTQKSNSRDSSAELTGYDMSDVLSVETNSAGPPSLPSQPSSASIGSSVNSA
FRSPVKIEPKDDYEQLPIKEMIEVKREVFLKAKERRRSKTTTVIPRVRRPMNAFMLFSKR
HRPLVHQENPNKDNRTVSKVLGQMWYSLTPAEKAEYHSLALLIKQAHYKANPDWRWSTKE
KKKAKSESLHSTPIAVTPQKNKIFDFDFRQSDDLAKSFVDGTAMLSPMTPMTPGASVFRH
LSSSRDPLQPAPSCFDFASLLSPSLSATSANTPSFSGSPALSSFSLDFERFRQGTNGRYP
NVFNPAMMSSLVNSSTPLLPMYGSTPTADTSSFYSPTASAFRVLNPTISSLIGGFSSADS
VTSPLLNITPTMTMKLPRHHPNFANETPLVAPDAEVVAAALPSAPSSAPAAEPEPVPAAP
VEEPVAVPTPSLLPTIVRPTPIPTAQFLAPTTPAFILQPTPAQLGMKRNKRPRPLEIDTD
EGLSAWKMFKRDDKQMDKVLDGVGFTTRFAQLPEFTPKIYSEIPSSPNLPTAAFKTPGEG
TFFFGANFNAEAIAKGESLTPLSASTPVTPAVKSVPTTPMFGERSSMKKLLEERRKLVAD
FLREEGLFPDNDVIFKFQEDHEDVFPSRMALILKIREVRQRKMATNQGPLNCNSNLDTII
AAIFDKYPLDASCYTPTVNEITV
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaagtgctgttcagaccaaaaagatgtttctttcaaaattcagaaatcaact
attccaggaagtttgcatatcgttcttaaaatcatctcgatggaaaatcaagaaggcgga
tcttcacaacagaaaatcctgacatactctgtcgcaagcgaagagtcgatcttacagatt
gcggccattccgtcattgctccaccaacaaacgctgccgtcagcggcggctacagcctac
agaagtcacgcgtcagaaagtcaagatgagctgtcccccacgaattcatcgcaagcgccg
acaccggctggcccgatcagcgcgttccgcttctcatccgcattttttaaccctgatatt
ttacgtaatctaaatattcagaagtcctctccaccaaatcaacctacagaagacgttaca
cctccacaagcatcgcaatcatcatcggatacccctactgagcccccaccaccacataca
gtaccatcaacatcaaggcctatcgtcatccatatagcgcatcctatccctttagccctt
aacaacgaactattatcaaattcaaattctgcagttgttctaggagactggatagggtgt
cgtgtgttggcacgcgttcctccaggtgtctatcaaacgggctacgtgaaacagtcttcc
aataatcgtaatgttctggtgcagttagatgatgggagagaggcgagatatgaaaatata
atccacgagtttaatttaacactggtgattgctgatcaggctccaactattgcagaactt
actcaagttaacgctaatccacttctggcggtacgattaccattggagaggtcagaatct
ctttaccgaactgctcaacttgtaaaaccgtgtgttgagaaagatgcaaagtatctggtg
agagtcacaggagctccttacgctagtcttgtaagtcgagctaacatcagattgcttcga
ccgccctggtatgaagacttgatgcaaaaaactagcggtacatcaacaaacccttcatca
aaatcagaaaatggtggacgacggatatccagagagaacacttccttgttgatgactcta
caacaacaacgttcacagtactttcaaaatgtaccgtccgtctcctcaccaacatcatca
aatcaggtagtagcgttgtccccacctgctggaactgtcactattatcgatcccacgaca
cagccaggttcatctaatcgagaatcaagctcgaagactgtgtcagtggattcggacgaa
gagattcctggatcttctaatcaggatcagtcggctgaaccgtcaccgaacccagctgca
cctcgctcattattcgtgaatccgtcacaggattcggaaatatttgaaggagattctgaa
ggtcagacgacgagcgtgtttcagaacattacagcgcctgtatgtgcgacaaaagcgatg
ttagatcagcagcgtttcaaaaaaggcgaaatcgttacgacacagtgcggtattcgaaaa
aagttcaatggcaaacagtggcggcgtttgtgttcaaaggaaggttgtaataaggaatca
caacgcagaggatactgctcacgacatctgtccctcaaaagtaaaccaccacacggacat
catctagaacggggctcacctgggaacagtaaatcagatctgttccacccggaatcatca
gttttcttgcaaagcccatcatcttctcgagtgcctaccaccgtcaactcaactgctttt
tctggcaaaatcaatccgttatcagcaccatccaccctcttatcggataaaaatttgcct
cctcatttctcgatcgaacgagctcaacaaattcagcaacagttgatgcaactcggaaac
gtcagatttgaaaatcagtttcagcagatccaacaacttttgatgcagcaggtaccacca
ggtcgacgacctgacctcccaccgatgacacaagctaacaacgtgttctgtcctccattg
agcctaccaaacacctcaggattattcaatttgaatccagctcttctttctcaacttacc
gctccacttattcaacaacatgctcaagctctacttcagcaacatatgaccgcacagaat
aatcaagtcaacaacaataatattaagcaagaaatcaaggaagaagagccggacgaggat
gacgatgatattattggaagcgacaacgtcagttattgtcaaaagacagaagagcgttcg
gacgatgatgatgatgaaagctcaggaggaggaggcggcggtctcgcgtcaacaggatcc
acaaatccaaacgggtctagttcaaattttgcaattcactccgctccaactggtcaatcc
aacgtagcagcaccagaagatcacaatcgcacccagaagagtaactcgcgagattcaagt
gcagaactgactggttacgacatgtctgatgttctatcagtggagaccaactcagctggt
ccaccgtcacttccgtcacagccatcatcagcctcaatcggcagcagtgtaaactcagcg
ttccgatcaccagtgaaaattgagccaaaagatgactatgagcagttgccaataaaagaa
atgattgaagtcaagcgagaggtttttctgaaggcgaaggagagacgacgttctaaaact
acaacagtcatcccacgcgttcgtcgcccgatgaatgcgttcatgctgttctcaaaacgt
caccgcccgctggtccaccaagaaaacccaaacaaggataatcgaacagtgtccaaagtt
ttgggtcaaatgtggtactccttgacgcctgctgaaaaagcggaatatcatagcctcgcc
cttttaatcaaacaagcccactacaaagccaatcccgactggagatggagtaccaaggag
aaaaagaaagccaagtccgagtcactgcactcaacacctatcgcagttactccgcaaaaa
aacaagatctttgattttgacttccgccaatctgatgatctagccaagtcctttgtcgat
ggcacagcgatgctcagcccaatgaccccaatgacacctggagcatcagtgttcagacac
ttgtcttcttcacgtgaccctctccagcccgctccatcatgcttcgactttgcttcattg
ttgagtccgagtctgtcggccacatctgcgaacactcccagtttttccggatcgccagct
ctatcttcattttcattggattttgagaggttccgccaaggaactaatgggaggtacccc
aacgtcttcaacccggcaatgatgagttcactggtcaactcgtcaacaccgctattgccc
atgtacggcagtaccccaacagctgacacatcctcattctactcgcccactgcgtctgca
ttccgcgttctgaatcccacaatctcctctcttattggtggcttctcgtcagccgactct
gtcacgtctccacttctgaacatcacaccaacaatgacgatgaagcttcctcgacaccat
cccaattttgccaatgaaactccactggtagctcctgatgcggaagttgtcgctgctgcc
ctaccatcagctccatcatcagctccagcagcagagccagaacccgttccagcagctccc
gttgaagagccagtggcagttccaaccccatctcttctgccaactatcgtccgcccaact
ccaattccaacagctcagtttttggctccaactactccagcgttcattctccaaccaaca
ccagcccaacttggaatgaagcgaaacaagcgtcctcgtcctcttgagatagacaccgat
gaaggtctttctgcgtggaagatgttcaaacgcgacgacaaacagatggacaaagttctt
gacggcgttgggttcaccacaaggtttgcgcagcttccggaatttacgccaaagatctac
agtgaaattccgtcgtccccaaatttgccaactgccgcattcaagaccccgggagaggga
actttcttcttcggagccaatttcaatgccgaggcgattgccaaaggagaaagcctcaca
ccactctctgcttctactccagtgaccccagctgtcaagtcggtcccaactactccaatg
ttcggcgagagatctagcatgaagaagttgttggaggagcgcagaaagttggttgccgat
tttctccgggaagagggactttttccagacaatgacgtaattttcaaatttcaagaagac
cacgaagatgtgttcccaagtcgtatggctttgattctcaaaatccgtgaagttcgtcag
cgcaagatggcgaccaatcaaggaccattaaactgcaattctaaccttgacaccatcatc
gccgccatctttgacaagtatccactcgacgcatcttgctacactccaacggtcaacgaa
attactgtataa
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