KEGG   Caenorhabditis briggsae (nematode): CBG_12371
Entry
CBG_12371         CDS       T01054                                 
Name
(RefSeq) Protein CBG12371
  KO
K05542  tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbr03016]
    CBG_12371
Enzymes [BR:cbr01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.88  tRNA-dihydrouridine16/17 synthase [NAD(P)+]
     CBG_12371
Transfer RNA biogenesis [BR:cbr03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    CBG_12371
SSDB
Motif
Pfam: Dus DHO_dh IMPDH FMN_dh DUF2656
Other DBs
NCBI-GeneID: 8581648
NCBI-ProteinID: XP_002639655
UniProt: A8XF98
LinkDB
Position
I:8890095..8892189
AA seq 527 aa
MNGDTTTEGYEVERCGESEAIDEESTVSPDAEDPLQIFRMPKKMKLADNVKNSDEIISKN
QRFWRETLQNQKITKVLAPMVDQSELAFRLFTRKYGAQLTFTPMIHAHLFVNDGTYRRNA
LALVKADRPLVVQFCANKVDTFLAACRLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDEV
DLICEMVSAVRDYCKIPVSCKIRVRDDRQETISYATRLVDAGATMLTVHGRTRDMKGAET
GLADWTRIRDVVEAVGSRVPVMANGNIQFPGDVERCMEATGAVAVMSAEGLLYNPLIFDD
ANAHVETWKIAAEYLEYARDFHAGTSAIRAHVFRICHHSLLEYEDLRMRVSLEHRVEDFE
NIVEELGKRARADAEAGKEREVEARKLFESIRNGQLMDAIEVSKQPHWISKPYFRLKEVA
KESIVGEGEKTFREKQKEKLAQTAKEMGVSMKQARKRERRQLTGARILEAKKIKFPPCAR
CGQPAGQGCVHSKCKKCCRYQCKHEHLDCKAHRYLFANLPSESVIEV
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgaacggtgacacaacaacagaaggatacgaagtggagagatgtggagaaagtgaagca
attgatgaagaatcaacggtgtctcctgatgccgaggatcctctacaaatttttcgtatg
ccaaagaagatgaaattagccgataatgtgaaaaattccgatgaaataatttcaaaaaat
cagcgattttggagagaaactcttcaaaaccaaaagattaccaaagtcttggcaccaatg
gtggatcaaagtgaactggcatttcggttattcacacgaaagtatggtgcacagttgaca
ttcactcccatgatccatgctcatttatttgtcaacgatggaacatatcgcaggaatgca
ttggctttagtgaaagctgatagaccgctcgttgtacaattttgtgcgaacaaagtggac
acttttctagctgcttgccgtcttgttgaagacgtttgtgatggagtagatctgaatttg
ggatgtccgcaaatggttgcgaagcgaggtcgatatggttcttggcttcaagacgaagta
gatttgatttgtgaaatggtgtcagctgtaagggattactgtaagattccggtttcctgt
aaaatacgcgtaagggatgatcgtcaagaaacaatcagctacgctacacgattagttgat
gctggagctactatgttgacagttcatggtcgcacgagagatatgaagggagctgagacg
ggcctggccgactggacgcgaatccgagatgttgtagaagctgttggatctagagtgcca
gtgatggcgaatggaaatattcagttcccaggagacgttgaaagatgcatggaagcgacg
ggagcagttgcagtgatgtctgctgaagggcttctctacaacccactgatatttgatgat
gctaacgcgcatgtggaaacatggaaaatcgcagctgaatatcttgaatatgctagggat
ttccatgcaggaacaagcgcgattcgagctcacgtcttcagaatttgtcatcatagccta
ctagagtatgaagatcttcgaatgcgtgtttctctggagcatcgtgtcgaagattttgag
aatatcgttgaagagttgggaaagagggcgagagcagatgcagaagcaggaaaagaacga
gaagttgaagcaagaaagttatttgaaagtatcagaaatggacaacttatggatgccatc
gaagtttcaaagcaacctcattggatttcaaaaccctatttccgtttgaaagaggttgcc
aaagaatcgattgttggagaaggcgagaagacgttcagagaaaaacagaaggaaaaactc
gcacaaactgccaaagaaatgggcgtgtctatgaaacaagctcgtaaaagagaacgtcgt
caactgacaggagctcggatactggaagcaaagaaaatcaaatttccgccatgtgcgaga
tgtggtcagccagctggacaaggatgtgttcatagcaagtgcaagaaatgctgtagatat
caatgcaaacatgaacatttggactgtaaagctcatcgttatcttttcgctaatctgcca
tctgaatctgtaatcgaggtctga

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