Caenorhabditis briggsae (nematode): CBG_18192
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Entry
CBG_18192 CDS
T01054
Name
(RefSeq) Protein CBG18192
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00310
Lysine degradation
cbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
CBG_18192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_18192
Enzymes [BR:
cbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
CBG_18192
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
CBG_18192
HMT complexes
COMPASS/SET1 complex
CBG_18192
COMPASS/SET1 complex (yeast)
CBG_18192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
SET
GTP1_OBG
RRM_1
FeoB_N
WASH-7_mid
AAA_18
Motif
Other DBs
NCBI-GeneID:
8584214
NCBI-ProteinID:
XP_045096410
LinkDB
All DBs
Position
III:5707764..5716020
Genome browser
AA seq
1998 aa
AA seq
DB search
MRLSLIRRATISQIQKLIKDDLNILKVDKFVLNVKAGSGGSGLARYDGVGGNGGDVFFVP
KPSLAFADIKSRLKNKMKIRSDNGGNATKTTLIGQHAKHQFFDVPVGIEVVDRDNNVLIA
RCSKPFGRYLIAHGGQGGYVKTGYKGARGEALDVEIHLKLRPNIGLLGFPNAGKSTLLKA
LVPEKSVKIAEYAFTTVHPQLAFYKSKNDNNSSLLEDNMFTLSVADLPGIIEGASQNRGK
GYKFLKHLEYADVIVMIIDSQGFQLKNDLDCPFRTPLESVSLLNKELELYDPKLVRKPAI
CILNKADTLDEKQKKEISLLISSLGTQKWVDDVPEDLRPKTPMKFEHAIQLSAKSKDIDE
FKKILTLMRHHLHTLSDMKENPEDRRATNNRNNNQKGENHRCRNAWQKIFEPGKHILRID
GAPPQQCSREDFERVKRAGVRKIPDGTLADPREHQDSMKNSIYHDVRLRSTNRYLPLPRF
RIDSNYCTVPPKREVSLFNMDDNCTEILLKDFAQACGEVEKAYVCHHPETQRHMKMAYVV
FKTPKEANNFCNKYETQNLLATKCTCKIDPFLSSLNDAYENATKCPLPQLPRDLAAIDNT
VLKELRNSFLRGKEEIYEEEEEEPYVSEMDPNVTSTSNFVNDTQNYQTEMDLGWIKLRFS
PVQLSFSSEPSPEVPPPPPPPIRIPSPPPPPPPKPLTMPPIPIPAPHYGHFLPSSSSMPE
FCPSDLKDEMKQPAVPLSPTQNSSESSAENLDINTDVKTPKQFRFGGWMQKTPMANNVLK
EMKKRLYCEEEFEPTPRPKDEKLMHIENDAFLDENFKSPEPPPSYSREDPYRSSSRVSNS
RRRHRSGSSSDEKEQSQRSSSRRHHRRTDSSNRSMDNGDDKGVVKETTVIKLEKRSIKYG
SGEMYEQVHIRKRTAVIRGKEQQLEDISSDENNSASVSGSTSTSTTATYPDLSDEERKKK
KKCTSPNGPAKGAKAFGWSDIDESDDDNRIRRGGRSKKNESERKSRLLTSSSSKRDISNS
QASSTPNLKSSRTPPPPPPSRGHPLHPMQHPNAYPVHHPHHIPPPPHMMPFYPMPPHHLP
HGPPVPMMIPPAMSNKGIANCDFRQPPPGFISSFTTSYPPVPNIPPPSAIPVRYQAPHLP
QPGLVHITSLSAIPDAAEGVPGPPSLRPSQRTDSSRNSESPEGHNITLQQRFSQLFGAKK
EEQAQSFEVERREYAPRNFEPQDDRHSLEDMDVEVSSDGETNSQIERSECMEEKRQQMME
RINEIRAPIVQSCHKQIVNELQSKISDDLRQQIMRQCMAHLDEKLRLKAIADVEKMKRER
EEKAKQEVAKPNTNMIAELMTLYTNQSFANIGRRNIVYRKQKPIPKRKHTRKEHHHDQDG
LSSPRSPRSVNSSRDSSPIQRSRRVSSSSSKSSLSKSSSDNSDDSDAEESPKIRKRIPSA
SSSEQAERRSFSSTSLRSGNSEKRLSELSGSERSSSDSELDINEGNKSRKRKLVASSGEE
ASSFSSRDSSPEPAEDLEPLVKKISSPSEFSSNKIGMEQESSATANGPILEEAITSGPLT
LDSSYLSYKIVNWEEANRSVSNLPGNSIRSEEYHPFTTEHCYFKIEHRKHSEIQIFDKHP
ELLDGQKPLIISPAPWGGMPDFGIEGTGPLIYMDSVDDKPATNDFPRKKQKPRKQVFEKD
YYEFKEPEIIKPPAAPRPKKIYKERTAEEKKKIVHDCANLPDLEDQWYMRSVLNRMQSIM
PVEELPWKRILAFREMIMPEEPVLRVNPIRSKKGLPEAFYEDPELDGVIPVAEGCARARP
YKKMTMKQKRSLVRRPENESHPTAIFSERDETIMRHQHVANKDMRLLQRRLLATLGDTNN
DFFKINQLKFRKKMIKFARSRIHGWGLYALETIAQDEMIVEYIGQKIRSLVAEEREKAYE
RRGIGSSYLFRIDEHSVIDATRRGNFARFINHSCQPNFMPSRTVIQKGDEITYDYKFPLE
DDKIDCLCGAKSCRGYLN
NT seq
5997 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgtcattgattaggcgcgcaacgatttcacaaatacaaaaactcatcaaagat
gatctgaacatcttgaaagttgataaatttgttttgaatgttaaagctggctctggcgga
tctggtttggcgagatacgatggagtaggaggaaatggtggagatgttttctttgttccc
aagccatctctcgctttcgcagatatcaaaagtcgtttgaaaaataaaatgaaaattcga
tcagataacggtgggaatgctacaaaaactacactgattggacaacatgcgaagcatcag
ttttttgatgttccagtaggaatcgaagtcgtggaccgagataataatgtacttattgct
agatgttcgaaaccatttggtcgttatttgattgcacatggtgggcaaggaggttatgtg
aaaacaggatataagggagcaagaggcgaggcattggatgtcgaaattcatttgaaactg
cgccctaatatcggtcttctcggatttccaaatgctggaaaatcaacacttctcaaagct
ctggtaccagaaaaatcggtaaaaattgccgaatacgccttcactacagtccatcctcaa
ttagcattctacaaaagcaaaaatgataataatagctctcttctagaagataacatgttt
actctatctgtcgctgatctacctggaatcatcgaaggagcatcgcaaaatcgaggcaaa
ggatacaagtttttgaagcacctggagtatgccgatgtcatagttatgataattgatagt
caaggatttcagctgaaaaacgatttggactgcccatttagaaccccactggaatcagtt
tctctactcaataaagaactagagctttacgatccaaagctagtgaggaagccggctatt
tgtattctgaataaagcggacactttagacgaaaaacaaaaaaaggaaatatctctgctc
atatcgtcactaggaactcaaaaatgggtggatgatgttccggaagacttgcgtcccaaa
acgccaatgaaattcgagcatgctatccaactcagtgctaaaagtaaagacatcgacgaa
tttaaaaaaatactgacactcatgcgacatcatttgcacacactcagtgatatgaaagaa
aatccggaggatcgtagagcaactaacaatagaaacaacaaccaaaaaggggaaaaccac
agatgcagaaatgcatggcaaaaaatattcgagccgggaaagcatattcttcgaatcgat
ggagctcctcctcaacaatgctcgcgggaagattttgagagagtaaaacgcgctggagtg
aggaaaataccggatggtacgctggctgatcctcgcgaacatcaggacagtatgaaaaac
tcaatttatcacgatgtccgccttcggtccacaaatcgctatcttcctcttcctcgcttt
cggatcgattcaaattactgtacagttcctccaaaacgagaagtttctttgttcaatatg
gacgataattgtacagaaattctcttgaaagattttgctcaagcatgtggagaagtcgag
aaagcatacgtctgccatcatccagaaactcaaagacatatgaaaatggcatatgtagtt
ttcaaaactccaaaagaggcgaacaatttttgcaataagtatgaaacacaaaatctactt
gctacaaaatgcacatgcaaaatcgatccttttctatcttcgctgaatgatgcttatgaa
aatgcaaccaagtgtccacttccacaactacctcgtgatttggccgctatagacaacacc
gtcttgaaagaacttcgaaatagcttccttcgtggaaaagaggaaatatacgaagaagaa
gaagaagaaccatacgtttcggaaatggacccaaatgttacatcaacatctaattttgtt
aatgatacccaaaattaccaaacagaaatggaccttggttggattaaactaagattttca
ccagttcaactaagcttttcttcagaaccatcgccagaagtaccaccgccaccgccacca
ccgataagaattccatcaccaccccctccaccgcctccaaaaccgttgacgatgcctcct
atccccattccggcgccccactatggtcattttttaccaagttccagttcaatgccagaa
ttctgtccgtcagatttaaaagacgaaatgaaacaacccgcggtaccgctatcacctact
caaaatagctctgaaagttcggctgaaaatcttgatatcaataccgacgttaaaacgcca
aaacaatttcgattcggtggatggatgcaaaaaacaccgatggccaataacgttcttaaa
gagatgaaaaaacgcctttattgtgaagaagaatttgagccgacccccagacctaaagac
gagaagctgatgcatatcgaaaatgatgcatttctcgatgaaaatttcaaatctccagaa
ccaccaccatcatattctcgtgaagatccttaccggagtagtagccgggtgtcaaactct
cgtagacgacaccggtctggaagctcatcggacgaaaaagaacagtcccaacggagttcc
agtagaaggcatcatcgcaggacagattcgagtaatcgatctatggataacggagatgat
aaaggtgttgtgaaagaaacgacggtgatcaaactggaaaagcgcagtatcaaatatgga
tcaggagaaatgtatgagcaggttcacatcaggaaaagaacggccgtgatacgaggaaaa
gaacaacaattggaagatatatcttcagacgaaaataattcggcttctgtttccggttct
acaagtaccagcaccactgcaacctacccagacctctctgatgaagagaggaagaaaaaa
aagaaatgtacttctccaaacggaccggctaaaggagctaaagcatttgggtggtctgac
attgatgaatctgatgatgacaatagaattcgaagaggtggaagatcgaagaaaaatgaa
tcggaacggaagtctcgcctactgacgtcgtcatcttcgaaacgagacatttcgaattcg
caggctagtagtaccccgaatctaaaatcttcaagaactcctccacctcctccgccatca
agagggcacccgctacatccaatgcagcatccaaatgcttatccggtccatcatccacat
catataccaccgccaccgcacatgatgcctttctacccgatgcctccacatcatctacct
catggaccgcctgtcccaatgatgatccctccagcaatgagtaataaaggaatagccaat
tgcgattttcgtcaaccacctcccggatttatttcatcattcacaacatcgtatcctccg
gttcctaatattccacctccttccgcaataccggtccgatatcaagctccacatcttccc
caacctggattggtccatattacctctttgtcggcaattccagacgccgctgagggcgtt
ccaggacctccatccttgcgtccttcccaaagaactgatagtagtcgtaattcggagtcg
cccgaggggcataatatcactcttcaacaaagattctcacagttattcggcgcaaagaag
gaagaacaagctcagagttttgaagttgaaagaagagagtatgctcccaggaactttgaa
cctcaagatgatcgacattctttggaagatatggatgttgaagtttctagtgatggagaa
actaattcacaaatagaaaggagtgaatgtatggaggaaaagaggcaacagatgatggaa
cgtatcaacgaaataagagctcctattgttcagtcttgtcataaacaaatagtgaatgaa
cttcaatcaaaaatcagtgatgatcttcggcaacaaatcatgaggcaatgtatggctcat
ttggatgagaaacttcgtttgaaagcgatagcagatgtggaaaaaatgaagcgggagcgc
gaagaaaaggcgaaacaagaagtagcgaaaccaaataccaacatgattgcagagttgatg
actctctacaccaatcagtcatttgcaaacataggacgtcgtaacatcgtgtatagaaag
caaaagccgataccaaagcgcaaacacactcggaaagaacaccatcatgaccaggatggg
ctatcttcgcctcgttcgcctcgctcagtgaactcttcaagagactcctcaccgattcaa
cgttcaaggcgagtgtcttcgtcgtcttccaaatcatcgctatctaaaagttcatccgat
aattctgacgattctgatgccgaggaatcgcccaagatcagaaaacgcattccatcagcg
tcaagttcggaacaagcagaaagaaggtcattcagttctacaagtcttcgtagcggcaat
tcggaaaagcgtttatcggaactgtcgggctccgaaagatcgtcatccgacagtgagctg
gatatcaatgaaggcaataaatctagaaagcgaaagttagtggcgtccagtggagaagaa
gcatcgtcattttctagcagggacagtagtccggaacctgctgaagatctagaaccacta
gtgaaaaagatttctagtccatctgaattttcctcaaacaaaattggaatggagcaagaa
tcttctgcaacagcaaacggtccaattctcgaagaagcgatcacctctggtccactcaca
ttagattccagttatctctcttataaaatagtcaactgggaggaagccaaccgctcggtt
agtaatctaccaggaaacagtatacgttcagaagaatatcacccattcaccacggaacac
tgttatttcaagattgaacacaggaaacattcggaaattcaaattttcgacaaacaccca
gagctgctagatggacaaaaacctttgataatatctccagctccttggggaggcatgcct
gatttcggcatcgaaggaacaggaccgctaatttacatggattctgtggatgataagcca
gctacaaacgattttcctcgaaagaaacagaaaccgagaaaacaagttttcgaaaaagat
tactatgagttcaaagaaccagaaatcatcaagccaccagctgctccacggcccaagaaa
atttataaagaacgcactgccgaagagaaaaagaaaattgttcatgattgtgctaattta
cccgatctagaagatcagtggtacatgcgtagtgttctgaatcgtatgcagtctatcatg
cctgttgaagagttaccatggaagcggatattggctttcagagagatgattatgcctgaa
gagcctgttttgagagtcaatccgatccgatcgaaaaaaggactgccggaagcattctac
gaagatccagaactggacggagttatccctgttgcagaaggatgcgcacgagctcgtccg
tacaaaaagatgacgatgaaacaaaaaagaagtcttgttcgtcgtccggagaacgagtca
catccaacggcaatattcagtgagagggatgagactataatgcgacatcagcacgtggcc
aacaaggatatgcgattgcttcaacggagacttctcgctacacttggagacacgaacaat
gacttcttcaaaatcaatcaattaaagttccgcaaaaagatgatcaaattcgcccgctct
cgtattcatggatggggactctacgctcttgaaactattgcacaagacgagatgattgtg
gaatacattggccaaaaaattcgttcacttgtggcagaagaacgcgaaaaagcatacgaa
cggcgtggaatcggtagctcatacttgttccggatcgacgaacactcggtcatcgatgca
acgagaagaggaaatttcgctcgtttcattaatcactcttgtcaacccaactttatgcca
agtcgaacagttatccaaaagggtgatgagatcacatacgattacaagtttcctcttgaa
gatgacaaaatcgactgtctctgtggtgccaaatcgtgtcgaggatacctcaattag
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integrated database retrieval system