Caenorhabditis briggsae (nematode): CBG_22116
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Entry
CBG_22116 CDS
T01054
Symbol
Cbr-taf-4.1
Name
(RefSeq) Protein CBR-TAF-4.1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CBG_22116 (Cbr-taf-4.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_22116 (Cbr-taf-4.1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_22116 (Cbr-taf-4.1)
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CBG_22116 (Cbr-taf-4.1)
Coactivators
SAGA/TFTC/STAGA complex
CBG_22116 (Cbr-taf-4.1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CBG_22116 (Cbr-taf-4.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFH
TAF4
Motif
Other DBs
NCBI-GeneID:
8580888
NCBI-ProteinID:
XP_045097482
LinkDB
All DBs
Position
I:2427633..2431392
Genome browser
AA seq
603 aa
AA seq
DB search
MSLPRFRLVQGKALGERSGPPPPLQQQPPPPQQIHQQQQPVNNMPPESMPQVKVEVDLMQ
DIPSQQEPQQHVMHQIKQEDPISPPRNQMMGASQPPPQMMQQRGPTPQQMSHFVQQPQHP
QIMNQPPIPPQNSANQPQNPNSEDKNVQKCVRFLKTLISLSQNEDPEMPDKALRVSNLIQ
GVIYMETTAEQFTRDLQEVLRSQAQPHLLPFLQNTLPALRNAVRNGTASVEGVNPPPGYV
FNNGRHPQNAPPTAQAPPQQQQQPQHMTPQAPPHDMRGPPMNPPMNQGVPISQAGPQGGP
GGPGPQQMMNRMNVDNGTPQGRPNFQQRPPGPPLQSTPVVRTISGGPIGHPQGPGPHQQP
PHPQMPPSQPPRTPQSVSSQGPQPMEVDGSPAPPPPRRQYPEGSLKSAILKHDEILNRIT
KRMMAPCQVEEDALIAISDAVESHLREMIAMMAGFAEHRVESQRIPENYVPVDDVKRQLK
FLEELDRQEEEMRENREKDALIRASKNKNIGKETIEKAKEMQRQDAEAKRNRDANAAAIA
ALSSSRPTKKWEGAASTSTAPRPRTVRVTARDLQMLVNQDNRFTGTFIREKLSYGGPTID
PTI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcctcgctttcgactcgttcagggaaaggcgctgggcgaacgttcaggtcca
ccgccaccgctgcaacaacaaccaccaccacctcaacaaatccatcagcaacaacaacct
gtaaataatatgccaccagaatcaatgccacaagtgaaagttgaggtggacctgatgcaa
gatataccatcacagcaggagccgcagcagcatgtgatgcaccaaataaagcaggaagat
ccgatctcgccacccaggaatcagatgatgggggcatcgcaaccaccaccacaaatgatg
cagcaacgcggaccaacacctcaacagatgtctcacttcgtccaacaacctcaacatcct
cagataatgaatcagccaccaattccacctcagaattcagcgaatcagcctcaaaacccg
aattctgaggataaaaatgtgcaaaagtgtgtgcgattcttgaaaacgttgattagtcta
tcccaaaatgaggaccccgagatgccggataaagcgttgagagtcagcaatttgattcag
ggcgttatctacatggaaacaacagctgagcagttcacacgtgatcttcaagaagtcctc
agatcacaagcacaaccacatcttcttcctttccttcagaatacgttgccagcactcagg
aatgctgttcgaaatggaaccgccagtgtagaaggcgtcaatccaccacccggctacgtc
ttcaacaacggacgtcatccacagaatgctccaccaacagctcaagcacctccacaacaa
cagcagcaaccccagcatatgactccacaagcgccaccacacgatatgagaggtccgcca
atgaatccaccaatgaatcaaggagttccaataagtcaagcggggccacaaggaggtcca
ggaggtccaggaccacaacaaatgatgaatcgaatgaatgtggataacggtactccacaa
ggaagacctaatttccagcaaagaccacctggaccaccgctccaatctactccagtagtc
cgtacgatatctggaggaccaataggacatccacaaggaccaggaccacatcagcaacca
cctcatccacagatgccgccttcccaaccaccaagaactccacaatccgtctcttcccag
ggaccacagcctatggaagttgatggatctccagctccacctcccccacgacgtcaatat
ccagaaggctcgttgaaatctgcgattctgaagcacgatgagattctgaatagaattacg
aaacgaatgatggcaccgtgccaagtggaggaggacgcgttgattgcgatttccgatgcg
gtcgagtcgcatttaagagagatgatagcgatgatggccgggtttgcggagcatcgagtc
gagtcgcaaagaattcccgagaactacgtccctgtggatgacgtcaaacgacaactgaaa
ttcctcgaggagctcgatcgtcaggaagaggagatgcgtgagaatcgagaaaaggatgcg
ctgattcgagccagtaaaaataagaatatcggaaaggagacgattgaaaaggcgaaagaa
atgcagagacaggacgccgaggcgaaaaggaatcgagatgcgaacgcggcggcgattgca
gcattgtccagtagtcggccaacgaagaagtgggaaggcgccgctagcacgtcgaccgct
ccacgcccacgtactgttcgtgtcaccgctcgtgatcttcaaatgttggtcaatcaggat
aatcgatttacgggaacattcatccgcgagaagctctcctacggtggaccaacgatcgac
ccgacaatctaa
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integrated database retrieval system
