Citrobacter braakii: A6J81_05235
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Entry
A6J81_05235 CDS
T04825
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cbra
Citrobacter braakii
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbra03016
]
A6J81_05235
Enzymes [BR:
cbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A6J81_05235
Transfer RNA biogenesis [BR:
cbra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6J81_05235
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
OSR1_C
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
ARC40177
LinkDB
All DBs
Position
1049396..1051330
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKDRESAEPEELIEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGVEH
EFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFADDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLIREDLTALNFVTIDSASTEDMDDALYAEELADGKLQLTVAIADPTAWIAEGSK
LDKTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANVERPVLACRMTITADGAIEDNITF
FAATIESKAKLVYDNVSDWLEGAGDWQPENDAIAEQIRLLHRICLSRGEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHMGFD
PANADALAALLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSYAEISIE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGENIARPQDDTTVQMAERRRLNRM
AERDVGDWLYARFLSDKAGTDTRFAAEIIDVSRGGMRVRLIDNGAVAFIPAPFLHAVRDE
LVCSQESGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgtgctgaaggggtggtaaaagccacggaaaaaggctttggcttcctggaagtcgatgca
caaaaaagctatttcattccgcccccgcagatgaaaaaagtcatgcatggcgaccgtata
gtagcggttatccatacagaaaaagatcgtgaatctgccgagccggaagaactgatcgaa
cccttcctgacgcgcttcgtgggtaaagttcagggcaaaaatgaccgcctggcgattgtg
ccagatcatccgttactgaaagatgctatcccttgccgtgccgcccgcggcgtcgagcat
gaatttaaagaaggtgattgggccgtagctgaaatgcgccgccacccgctgaaaggcgat
cgcaccttctatgccgagttaacccaatttatcacgtttgctgatgaccactttgttccg
tggtgggtcacgctggcacgccataatctcgaaaaggaagcaccggacggtgtggcaact
gagatgctggatgaaggtctgattcgtgaggacttaaccgccctcaactttgtcaccatc
gacagcgccagtaccgaagatatggacgatgcgctgtatgctgaagaactggccgacggc
aaactgcaattaacagtcgccattgccgatcctaccgcctggattgcagaaggcagcaaa
ctggataaaacggcaaaaattcgcgcgtttactaactatctgccgggattcaatatcccg
atgctgccacgtgaactgtctgacgatttgtgctctctacgtgcaaacgttgagcgtccg
gttctggcatgtcggatgaccatcaccgcggatggcgcgattgaagacaacatcacgttc
ttcgcagcaacgattgagtcgaaagcgaagctggtctacgacaacgtctccgactggctg
gaaggcgcaggcgactggcagcctgaaaacgacgcgattgctgaacaaatccgcctgctg
caccgtatttgcctgagtcgtggtgagtggcgtcataatcatgcactggtatttaaagat
cgcccggattaccgtttcgttctgggtgaaaaaggcgaagtgctggacatcgtcgcagaa
ccgcgccgcatcgcaaaccgtatcgtggaagaatccatgattgcggcgaacatttgtgcc
gcccgcgtgcttcgcgacaagctgggcttcggtatttataacgtccatatgggatttgac
cccgctaacgccgacgctctggccgcgctgctgaaaacccatggcatgcacgtggatgcc
gaagaggtcctgacgctggaaggtttctgcaaactgcgccgcgaactggatgcacagcct
tctggtttcctcgacagtcgaattcgccgcttccagtcttacgctgaaataagtatcgag
ccaggtccgcactttgggctgggtctggaggcttatgccacctggacatctcctattcgt
aagtatggcgatatgatcaaccaccgcctgcttaaggccgtcatcaaaggtgaaaacatc
gcccgccctcaggatgataccaccgtgcaaatggcggaacgtcgtcgcctgaaccggatg
gctgagcgtgatgttggtgactggttatacgcccgtttcctgagcgacaaagccgggacc
gatacccgctttgcagccgagatcattgacgtcagccgtggcggcatgcgtgtgcgttta
attgataatggcgctgttgcatttattcctgccccgttcctgcacgccgttcgtgacgaa
ctggtatgcagccaggaaagcggcaccgtacaaattaaaggtgaagtggtttacaaagtc
acggatgtgattgacgtaactatcgccgaagtgcggatggaaactcgcagcgttatcgca
cgtcccgctatgtaa
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