Corvus brachyrhynchos (American crow): 103619166
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Entry
103619166 CDS
T08418
Symbol
COL19A1
Name
(RefSeq) collagen alpha-1(XIX) chain isoform X1
KO
K24340
collagen type XIX alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cbrc00536
]
103619166 (COL19A1)
Glycosaminoglycan binding proteins [BR:
cbrc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103619166 (COL19A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
DUF4901
Motif
Other DBs
NCBI-GeneID:
103619166
NCBI-ProteinID:
XP_017594801
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MKNIGPCIVWLCTAAFLLPVSTSVAVSDQTGAVCPLMKTVARNLKQINRDSHGVSGFDLA
ESFSLRQTSCGGEKICFKLGSAPLIRYTRQVFPNGLPEEYSLIATFRVRRSTKKERWYIW
QVLNQYDTPEISVLLDGTKKVVEYMTKSTQGNILHYTFKSREIYPLFDRQWHKLGISVQS
GIISLYLDCNLIERKQTDEKFTIDLQGRTLIASRAADDKPVDIELHHIAVYCNSQLAAED
TCCEISADLCPREERLLATTPSPVTAHASKIYSLPGMQQEPTQRCYCFPNKGEAGLPGVA
GLPGQKGEKGEKGEMGVKGPDGVAGLPGEKGERGFPGSKGEEGEEGEKGDKGEPGPEGLP
GTEGLKGDPGSPGVAGPKGEKGDAGPPGPAALSGLLEGPQGPPGKEGQRGRRGKPGLPGK
PGPPGPPGPSGLKGILDSLNKHYNESDTRLLGVLGTPGLKGQKGDIGQKGELGMTGAKGE
KGEPSEKGDKGDPGETGMEGSKGNKGEMGDPGPPGLIGNPGSKGLQGPPGPVGPRGLPGE
VGLPGEPGIPGNPGIKGDKGDPGGIMGPPGHPGPKGDMGPPGPSLPGRPGPTGVPGNPGP
RGPKGERGLPGVQGAPGEMGPPGIGIQGSPGPIGPTGSAGVQGPRGPPGLPGTPGTPGIN
GTPGRDGKPGLPGPPGDPVALPLVGDMGAILKGDPGTRGPPGIPGREGPKGSKGERGFPG
LAGEKGDEGLQGAPGLPGIPGPSGPSGVPGRPGHPGPAGAKGEKGSEGSPGKPGPPGPPG
MPYNERNGMSSLYKLQGGVSVASYPGPPGPPGPKGDPGTAGDPGPMGLPGLEGLPGEKGD
RGPAGAPGVSGTPGKPGSPGSPGMPGEPGERGPNGEIGFPGPEGPQGKPGINGKDGLPGP
PGAVGRPGDRGPKGERGDQGIPGDRGPQGERGKPGPSGEKGDVGPVGPPGDRGYPGSPGH
QGPPGSPGPPGFSADAISLEEIKRYIKQEVLKVFEERMAQFVSQLKLPAAMLASQAHGKP
GPPGKDGSPGPPGKDGLPGPPGERGIQGYRGQKGERGEPGIGLPGNPGPPGPAAAGLPGP
PGTPGSPGPQGPPGPHGRCNPADCYYHVSQTRSRSSRK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatcggaccctgcatagtttggctttgtacggcagccttcctccttcctgtt
tctacttctgtggctgtcagtgaccagacaggtgctgtgtgtcctttaatgaaaacagtt
gcccgtaatctcaaacaaatcaacagagacagtcatggtgtatcagggtttgatctggca
gaaagcttttctttaaggcaaacatcctgtggaggggaaaagatctgttttaaactggga
agtgcacctctcatcagatacacaaggcaagtatttccaaatgggcttcctgaagaatac
tccctaattgccacgttccgtgtacggagaagtaccaagaaagagcgttggtatatatgg
caagttttaaatcagtatgacacacctgagatttctgtcctcctggatggtacaaaaaag
gtggtggagtatatgaccaaatccactcagggaaatatactgcactacacttttaagagt
cgagaaatttatccattgtttgatcggcagtggcataagcttggtattagcgtgcagtca
gggatcatttccctctatttggattgtaatttaattgagagaaagcagactgatgaaaaa
ttcaccattgacttgcagggaaggacactgattgcttctcgtgctgcggatgataagcct
gtagatattgaacttcaccacatagcagtatattgtaattcacaacttgcagcagaagat
acgtgttgtgaaatatctgcagacttgtgcccacgtgaggagaggttactggctacgact
ccatcaccagtgactgctcatgccagcaagatatactcgcttccaggaatgcagcaagaa
cctacacagagatgctactgctttccaaataaaggagaagcaggattgccaggagtagct
ggtttaccaggccagaaaggagagaaaggtgaaaagggtgagatgggtgtgaaaggaccg
gacggtgttgctggtctgcctggtgaaaagggtgaacgtggctttccaggtagtaaaggt
gaagaaggtgaagagggtgaaaaaggagataaaggagaaccaggaccagaaggccttcct
ggaactgagggactaaaaggtgatcctggtagtcctggtgtggctggtccaaaaggagaa
aagggagatgcaggacctccaggaccggctgccttgagtggtttgctggagggtccccaa
ggtccacctggcaaagaaggtcaaagggggagacgaggcaaaccaggccttccaggaaaa
ccggggccaccaggacctcctggtccttctggactaaaaggaattctggattcattgaac
aagcattataatgagagtgatacaagactactaggagtacttgggacccctggacttaaa
gggcagaagggagacattggtcaaaaaggagaattgggaatgactggcgcaaaaggagaa
aagggagaaccttctgaaaaaggggacaagggagatccaggagagactggaatggaggga
tcaaaaggaaataagggtgaaatgggagatcctggaccacctggtcttattggaaatcca
ggatcaaagggactgcaaggccctccaggacctgtcggacccaggggactgccaggagaa
gttggcttaccgggagagcctgggataccgggaaacccaggaattaaaggagacaagggt
gaccctggtggaattatgggacctcctggtcatccaggtccaaaaggtgatatggggcct
cctggaccaagtctgcctggaagaccaggtcccactggtgttcctggaaatccaggtcca
agggggccaaagggagaaagaggactacctggtgtacagggagcacctggggagatgggg
ccgcctggaataggcattcagggatcaccaggtcctataggtccaactggatcagcaggt
gtgcagggtcctaggggacctccaggattaccaggaactccaggtactcctggaattaat
ggcactccaggaagagatggaaagccaggactaccaggccctccaggtgatcctgttgca
cttccacttgtgggagacatgggtgctatactgaagggcgatcctggcacaagaggtcct
ccaggcattcccggtagagaaggaccaaaaggaagcaaaggtgaacgtggatttcctggg
cttgcaggagaaaagggtgatgagggtcttcaaggtgctcctggactgccgggtatacca
ggaccaagcggcccatctggagtcccaggaagacctggacatccgggtccagcaggagca
aaaggagaaaagggtagtgaaggttctcctgggaaacctggaccacctgggcctccgggt
atgccttacaatgaaagaaatggaatgagcagcttatataaactgcagggaggcgtgagt
gtcgcaagttacccaggtccaccaggacctccaggtccaaaaggagatcctggaacagcg
ggagacccaggaccaatgggattgccaggactggaaggactcccaggggaaaagggtgac
cgtggaccagccggcgcaccaggagtatcagggacaccgggaaagccaggatctcctggg
tccccagggatgccaggagaacctggtgaaagaggacctaatggagagataggcttccct
ggtccagaagggccgcaaggaaaaccaggaatcaatggaaaagatggattgccaggtcct
ccgggtgctgtggggagaccaggagacagaggacccaaaggagaacgtggagatcagggt
attccgggggatagaggtccacagggtgaacgagggaaacctggcccatcaggagaaaag
ggggatgtgggtcctgttggtcctccaggagacagaggctacccaggatcaccaggtcat
caaggtcccccaggttcaccaggacccccagggttttcagctgatgcaatttcacttgaa
gaaataaaaagatatatcaaacaagaggttcttaaggtttttgaagaaaggatggctcaa
tttgtatcccagctgaagctgcctgctgcaatgcttgcctcccaagctcatggaaaacca
gggcccccaggaaaagatgggtcaccagggccaccaggaaaggacggtttgccaggacca
ccaggagaacgtggaattcaaggttatagaggacagaaaggggaaagaggcgagcctgga
attggactgcctggtaaccctggaccacctggccctgcagctgctggcctgccaggccca
ccaggaacaccaggctcaccgggaccgcaggggccgcctggaccccatgggagatgcaat
ccggcagattgctattaccacgtatcacagactcggtcacgctccagcaggaaataa
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